Protein ID | Ani_SJS100_1|g863.t1 |
Gene name | |
Location | scaffold_003:136789..139418 |
Strand | + |
Gene length (bp) | 2629 |
Transcript length (bp) | 2544 |
Coding sequence length (bp) | 2544 |
Protein length (aa) | 848 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05026 | DCP2 | Dcp2, box A domain | 8.4E-30 | 10 | 93 |
PF00293 | NUDIX | NUDIX domain | 6.8E-18 | 98 | 216 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003723 | RNA binding | Yes |
GO:0003676 | nucleic acid binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 13 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g863.t1 MTETKMQLEDWLDDLCVRFIINLPREELESVERICFQVEEAQWFYEDFIRPLDPALPSLSLKAFALRIFQHCPLM SQWSHYHHITAFSEFLAYKTRVPVRGAIMLNHDMDEVVLVKGWKKGANWSFPRGKINKDEKDIDCAIREVYEETG FDVRQAGLVQDEKDVKFIEITMREQHMRLYVFRGVPQDAHFEPRTRKEISKIEWYKLSELPTLKKSKQQDQGFVV ANANKFYMVAPFMHPLKKWIAQQKRLEGKLPGGPKLPMPNDMSIDEASHAVHSFTPNQAAAEMATPSDLPELAST QDASAHLKRLLNINNLVPPKNPSPVTHSPVSGPSASKSNALLELLRTGSSRESLPQAPIPEQQSTPAPPPGSVPP VNRPHPAMGFFPGFPQQGPHVGVPPSLPSYPQPNHGPVPHLPASIVNAMSHGPLNQIPLSAAPPGPSGNFHGTFP PQQSLASHFYKETGSLAELAPAPQSQAAPAPYHRTGDPQFSQSGQPSQVQGATVPPASKLPPPKLTSHSLALLNV FKDDSTKTPKTPKATLVSHTGAAPANERRSSQHQDQLLNLLRGSPAPAVSGPAELSGQSVSPARKQVLQRPRGDQ SPARRSSPAAKPWTSAPASGPTMHTLQPGTQKPSRKGQNGPNRKGPRTEQASAVTAPITILARPQAAKEQPSARA SPQSSRPPSQPRGPKPSSPEPPKPFQPQILRRSDHPNAINLLPIRTALNENQDQQAAARSTESPRHSQPQPSFDR RPSQTVAQKEMLLSLFGKSSVSPNISPAELSASVPKPSQPSSVVSPLSPVNLPAVPNVDQTPHEMEDSQASNANK VSSPVNKAFLLGFLEGVAKGNK* |
Coding | >Ani_SJS100_1|g863.t1 ATGACAGAAACAAAGATGCAGTTGGAAGACTGGCTGGATGATTTGTGTGTTCGCTTCATCATTAACTTACCCCGA GAAGAGCTCGAATCTGTTGAACGCATCTGTTTTCAGGTTGAAGAAGCACAATGGTTCTACGAAGACTTCATTCGG CCGTTGGATCCGGCTCTTCCGTCCTTGTCCCTGAAAGCCTTCGCTTTGCGCATCTTTCAGCATTGCCCATTGATG TCCCAATGGTCGCACTATCACCACATCACCGCGTTTTCCGAATTCTTGGCCTACAAAACCCGGGTCCCGGTGCGC GGTGCCATCATGCTCAATCATGACATGGATGAGGTGGTCTTAGTCAAAGGCTGGAAGAAGGGCGCCAACTGGAGT TTCCCACGAGGCAAAATCAACAAAGATGAGAAAGACATCGACTGTGCCATCCGGGAAGTGTACGAGGAAACTGGT TTTGACGTTCGACAAGCTGGATTGGTCCAAGATGAGAAAGATGTCAAGTTCATCGAAATCACCATGAGAGAGCAG CACATGAGGCTGTATGTTTTCCGGGGCGTGCCACAGGATGCTCATTTCGAGCCGCGTACCCGCAAGGAGATCAGC AAGATTGAGTGGTACAAGCTGTCGGAGTTGCCGACCCTCAAGAAGAGCAAGCAGCAAGATCAAGGCTTCGTCGTC GCCAATGCGAACAAGTTCTACATGGTAGCTCCGTTTATGCATCCCCTCAAGAAGTGGATTGCCCAACAAAAGAGG CTTGAAGGAAAGCTGCCAGGTGGCCCGAAGTTACCTATGCCGAACGACATGTCGATTGACGAAGCTTCCCATGCC GTGCACAGCTTCACACCAAACCAAGCCGCTGCGGAAATGGCTACGCCCAGTGACTTGCCAGAACTTGCGTCGACC CAAGACGCCTCTGCTCATCTTAAGCGCCTTCTCAATATTAACAATCTGGTTCCCCCTAAGAATCCATCGCCGGTC ACCCATTCGCCAGTGTCCGGGCCTAGTGCCTCTAAATCTAATGCTCTCTTAGAGCTGCTGAGGACCGGCTCGTCT CGTGAATCCCTTCCACAAGCCCCTATTCCAGAGCAGCAATCGACTCCAGCACCTCCCCCAGGAAGTGTGCCTCCT GTGAATCGGCCTCATCCCGCGATGGGCTTCTTCCCGGGCTTTCCTCAACAAGGCCCTCATGTCGGGGTACCTCCC AGCTTGCCGTCATACCCACAACCAAATCACGGTCCTGTACCACATCTACCAGCATCCATTGTCAATGCAATGTCT CATGGCCCGTTGAATCAAATACCGCTTTCTGCTGCTCCTCCGGGGCCATCGGGCAATTTTCACGGAACGTTCCCC CCTCAACAGTCGCTTGCATCACACTTCTACAAGGAGACAGGTTCACTGGCAGAACTCGCTCCCGCTCCGCAGAGT CAAGCCGCCCCTGCCCCCTACCATCGCACGGGTGATCCTCAATTCTCTCAATCAGGTCAGCCTTCCCAAGTTCAG GGTGCGACTGTGCCACCGGCGAGCAAGTTGCCTCCACCGAAGCTTACGAGCCATTCACTGGCTCTGTTGAATGTT TTTAAGGATGACTCGACCAAAACACCCAAGACGCCTAAGGCGACCTTGGTGTCACATACAGGAGCGGCACCAGCC AATGAACGAAGATCATCACAGCATCAGGATCAGCTCCTTAATCTGCTGAGAGGGTCCCCGGCTCCTGCTGTCTCT GGGCCGGCCGAACTATCGGGTCAGTCAGTGTCCCCGGCTAGAAAACAAGTCCTTCAACGGCCCCGGGGTGACCAG AGCCCTGCGCGGCGCAGTTCGCCCGCGGCTAAACCATGGACTTCTGCACCAGCCTCTGGACCGACCATGCATACT CTACAGCCTGGAACTCAAAAGCCATCGAGAAAGGGACAGAATGGGCCGAATCGCAAAGGACCCAGAACTGAGCAG GCATCAGCTGTCACGGCCCCTATAACAATCCTGGCAAGACCGCAAGCCGCTAAGGAACAGCCTTCCGCCCGCGCT TCTCCGCAATCCTCCCGTCCTCCCTCCCAGCCTAGGGGTCCGAAACCCAGTTCTCCAGAGCCACCGAAACCCTTC CAGCCGCAAATTCTACGTCGCTCTGATCATCCAAATGCAATCAATCTTCTCCCGATTCGGACTGCACTCAATGAG AATCAAGATCAACAGGCCGCCGCACGCTCCACAGAATCTCCTCGGCATTCGCAGCCTCAACCGAGCTTCGACCGT CGACCGAGTCAAACTGTTGCGCAAAAGGAGATGCTCTTGTCACTCTTTGGCAAATCATCTGTCTCCCCAAACATT TCTCCTGCGGAACTGAGCGCATCTGTTCCGAAACCATCGCAGCCTTCTTCTGTCGTTAGTCCATTGTCACCGGTC AATTTGCCCGCTGTTCCTAACGTTGACCAGACGCCCCATGAAATGGAGGATAGTCAGGCATCTAACGCCAATAAG GTCTCTTCGCCTGTCAATAAGGCTTTCTTGCTTGGGTTTCTGGAAGGAGTTGCGAAAGGAAATAAATAA |
Transcript | >Ani_SJS100_1|g863.t1 ATGACAGAAACAAAGATGCAGTTGGAAGACTGGCTGGATGATTTGTGTGTTCGCTTCATCATTAACTTACCCCGA GAAGAGCTCGAATCTGTTGAACGCATCTGTTTTCAGGTTGAAGAAGCACAATGGTTCTACGAAGACTTCATTCGG CCGTTGGATCCGGCTCTTCCGTCCTTGTCCCTGAAAGCCTTCGCTTTGCGCATCTTTCAGCATTGCCCATTGATG TCCCAATGGTCGCACTATCACCACATCACCGCGTTTTCCGAATTCTTGGCCTACAAAACCCGGGTCCCGGTGCGC GGTGCCATCATGCTCAATCATGACATGGATGAGGTGGTCTTAGTCAAAGGCTGGAAGAAGGGCGCCAACTGGAGT TTCCCACGAGGCAAAATCAACAAAGATGAGAAAGACATCGACTGTGCCATCCGGGAAGTGTACGAGGAAACTGGT TTTGACGTTCGACAAGCTGGATTGGTCCAAGATGAGAAAGATGTCAAGTTCATCGAAATCACCATGAGAGAGCAG CACATGAGGCTGTATGTTTTCCGGGGCGTGCCACAGGATGCTCATTTCGAGCCGCGTACCCGCAAGGAGATCAGC AAGATTGAGTGGTACAAGCTGTCGGAGTTGCCGACCCTCAAGAAGAGCAAGCAGCAAGATCAAGGCTTCGTCGTC GCCAATGCGAACAAGTTCTACATGGTAGCTCCGTTTATGCATCCCCTCAAGAAGTGGATTGCCCAACAAAAGAGG CTTGAAGGAAAGCTGCCAGGTGGCCCGAAGTTACCTATGCCGAACGACATGTCGATTGACGAAGCTTCCCATGCC GTGCACAGCTTCACACCAAACCAAGCCGCTGCGGAAATGGCTACGCCCAGTGACTTGCCAGAACTTGCGTCGACC CAAGACGCCTCTGCTCATCTTAAGCGCCTTCTCAATATTAACAATCTGGTTCCCCCTAAGAATCCATCGCCGGTC ACCCATTCGCCAGTGTCCGGGCCTAGTGCCTCTAAATCTAATGCTCTCTTAGAGCTGCTGAGGACCGGCTCGTCT CGTGAATCCCTTCCACAAGCCCCTATTCCAGAGCAGCAATCGACTCCAGCACCTCCCCCAGGAAGTGTGCCTCCT GTGAATCGGCCTCATCCCGCGATGGGCTTCTTCCCGGGCTTTCCTCAACAAGGCCCTCATGTCGGGGTACCTCCC AGCTTGCCGTCATACCCACAACCAAATCACGGTCCTGTACCACATCTACCAGCATCCATTGTCAATGCAATGTCT CATGGCCCGTTGAATCAAATACCGCTTTCTGCTGCTCCTCCGGGGCCATCGGGCAATTTTCACGGAACGTTCCCC CCTCAACAGTCGCTTGCATCACACTTCTACAAGGAGACAGGTTCACTGGCAGAACTCGCTCCCGCTCCGCAGAGT CAAGCCGCCCCTGCCCCCTACCATCGCACGGGTGATCCTCAATTCTCTCAATCAGGTCAGCCTTCCCAAGTTCAG GGTGCGACTGTGCCACCGGCGAGCAAGTTGCCTCCACCGAAGCTTACGAGCCATTCACTGGCTCTGTTGAATGTT TTTAAGGATGACTCGACCAAAACACCCAAGACGCCTAAGGCGACCTTGGTGTCACATACAGGAGCGGCACCAGCC AATGAACGAAGATCATCACAGCATCAGGATCAGCTCCTTAATCTGCTGAGAGGGTCCCCGGCTCCTGCTGTCTCT GGGCCGGCCGAACTATCGGGTCAGTCAGTGTCCCCGGCTAGAAAACAAGTCCTTCAACGGCCCCGGGGTGACCAG AGCCCTGCGCGGCGCAGTTCGCCCGCGGCTAAACCATGGACTTCTGCACCAGCCTCTGGACCGACCATGCATACT CTACAGCCTGGAACTCAAAAGCCATCGAGAAAGGGACAGAATGGGCCGAATCGCAAAGGACCCAGAACTGAGCAG GCATCAGCTGTCACGGCCCCTATAACAATCCTGGCAAGACCGCAAGCCGCTAAGGAACAGCCTTCCGCCCGCGCT TCTCCGCAATCCTCCCGTCCTCCCTCCCAGCCTAGGGGTCCGAAACCCAGTTCTCCAGAGCCACCGAAACCCTTC CAGCCGCAAATTCTACGTCGCTCTGATCATCCAAATGCAATCAATCTTCTCCCGATTCGGACTGCACTCAATGAG AATCAAGATCAACAGGCCGCCGCACGCTCCACAGAATCTCCTCGGCATTCGCAGCCTCAACCGAGCTTCGACCGT CGACCGAGTCAAACTGTTGCGCAAAAGGAGATGCTCTTGTCACTCTTTGGCAAATCATCTGTCTCCCCAAACATT TCTCCTGCGGAACTGAGCGCATCTGTTCCGAAACCATCGCAGCCTTCTTCTGTCGTTAGTCCATTGTCACCGGTC AATTTGCCCGCTGTTCCTAACGTTGACCAGACGCCCCATGAAATGGAGGATAGTCAGGCATCTAACGCCAATAAG GTCTCTTCGCCTGTCAATAAGGCTTTCTTGCTTGGGTTTCTGGAAGGAGTTGCGAAAGGAAATAAATAA |
Gene | >Ani_SJS100_1|g863.t1 ATGACAGAAACAAAGATGCAGTTGGAAGACTGTGAGTCTCGCCTTGACGCTTGTCTTCCCCCCCGCCCGCGTGGC TAAGGTGACCTCGGCTGTGCTAACTTGGATGGCTCCGGCAGGGCTGGATGATTTGTGTGTTCGCTTCATCATTAA CTTACCCCGAGAAGAGCTCGAATCTGTTGAACGCATCTGTTTTCAGGTTGAAGAAGCACAATGGTTCTACGAAGA CTTCATTCGGCCGTTGGATCCGGCTCTTCCGTCCTTGTCCCTGAAAGCCTTCGCTTTGCGCATCTTTCAGCATTG CCCATTGATGTCCCAATGGTCGCACTATCACCACATCACCGCGTTTTCCGAATTCTTGGCCTACAAAACCCGGGT CCCGGTGCGCGGTGCCATCATGCTCAATCATGACATGGATGAGGTGGTCTTAGTCAAAGGCTGGAAGAAGGGCGC CAACTGGAGTTTCCCACGAGGCAAAATCAACAAAGATGAGAAAGACATCGACTGTGCCATCCGGGAAGTGTACGA GGAAACTGGTTTTGACGTTCGACAAGCTGGATTGGTCCAAGATGAGAAAGATGTCAAGTTCATCGAAATCACCAT GAGAGAGCAGCACATGAGGCTGTATGTTTTCCGGGGCGTGCCACAGGATGCTCATTTCGAGCCGCGTACCCGCAA GGAGATCAGCAAGATTGAGTGGTACAAGCTGTCGGAGTTGCCGACCCTCAAGAAGAGCAAGCAGCAAGATCAAGG CTTCGTCGTCGCCAATGCGAACAAGTTCTACATGGTAGCTCCGTTTATGCATCCCCTCAAGAAGTGGATTGCCCA ACAAAAGAGGCTTGAAGGAAAGCTGCCAGGTGGCCCGAAGTTACCTATGCCGAACGACATGTCGATTGACGAAGC TTCCCATGCCGTGCACAGCTTCACACCAAACCAAGCCGCTGCGGAAATGGCTACGCCCAGTGACTTGCCAGAACT TGCGTCGACCCAAGACGCCTCTGCTCATCTTAAGCGCCTTCTCAATATTAACAATCTGGTTCCCCCTAAGAATCC ATCGCCGGTCACCCATTCGCCAGTGTCCGGGCCTAGTGCCTCTAAATCTAATGCTCTCTTAGAGCTGCTGAGGAC CGGCTCGTCTCGTGAATCCCTTCCACAAGCCCCTATTCCAGAGCAGCAATCGACTCCAGCACCTCCCCCAGGAAG TGTGCCTCCTGTGAATCGGCCTCATCCCGCGATGGGCTTCTTCCCGGGCTTTCCTCAACAAGGCCCTCATGTCGG GGTACCTCCCAGCTTGCCGTCATACCCACAACCAAATCACGGTCCTGTACCACATCTACCAGCATCCATTGTCAA TGCAATGTCTCATGGCCCGTTGAATCAAATACCGCTTTCTGCTGCTCCTCCGGGGCCATCGGGCAATTTTCACGG AACGTTCCCCCCTCAACAGTCGCTTGCATCACACTTCTACAAGGAGACAGGTTCACTGGCAGAACTCGCTCCCGC TCCGCAGAGTCAAGCCGCCCCTGCCCCCTACCATCGCACGGGTGATCCTCAATTCTCTCAATCAGGTCAGCCTTC CCAAGTTCAGGGTGCGACTGTGCCACCGGCGAGCAAGTTGCCTCCACCGAAGCTTACGAGCCATTCACTGGCTCT GTTGAATGTTTTTAAGGATGACTCGACCAAAACACCCAAGACGCCTAAGGCGACCTTGGTGTCACATACAGGAGC GGCACCAGCCAATGAACGAAGATCATCACAGCATCAGGATCAGCTCCTTAATCTGCTGAGAGGGTCCCCGGCTCC TGCTGTCTCTGGGCCGGCCGAACTATCGGGTCAGTCAGTGTCCCCGGCTAGAAAACAAGTCCTTCAACGGCCCCG GGGTGACCAGAGCCCTGCGCGGCGCAGTTCGCCCGCGGCTAAACCATGGACTTCTGCACCAGCCTCTGGACCGAC CATGCATACTCTACAGCCTGGAACTCAAAAGCCATCGAGAAAGGGACAGAATGGGCCGAATCGCAAAGGACCCAG AACTGAGCAGGCATCAGCTGTCACGGCCCCTATAACAATCCTGGCAAGACCGCAAGCCGCTAAGGAACAGCCTTC CGCCCGCGCTTCTCCGCAATCCTCCCGTCCTCCCTCCCAGCCTAGGGGTCCGAAACCCAGTTCTCCAGAGCCACC GAAACCCTTCCAGCCGCAAATTCTACGTCGCTCTGATCATCCAAATGCAATCAATCTTCTCCCGATTCGGACTGC ACTCAATGAGAATCAAGATCAACAGGCCGCCGCACGCTCCACAGAATCTCCTCGGCATTCGCAGCCTCAACCGAG CTTCGACCGTCGACCGAGTCAAACTGTTGCGCAAAAGGAGATGCTCTTGTCACTCTTTGGCAAATCATCTGTCTC CCCAAACATTTCTCCTGCGGAACTGAGCGCATCTGTTCCGAAACCATCGCAGCCTTCTTCTGTCGTTAGTCCATT GTCACCGGTCAATTTGCCCGCTGTTCCTAACGTTGACCAGACGCCCCATGAAATGGAGGATAGTCAGGCATCTAA CGCCAATAAGGTCTCTTCGCCTGTCAATAAGGCTTTCTTGCTTGGGTTTCTGGAAGGAGTTGCGAAAGGAAATAA ATAA |