© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8627.t1 |
| Gene name | |
| Location | scaffold_069:164984..166443 |
| Strand | + |
| Gene length (bp) | 1459 |
| Transcript length (bp) | 1392 |
| Coding sequence length (bp) | 1392 |
| Protein length (aa) | 464 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16010 | CDH-cyt | Cytochrome domain of cellobiose dehydrogenase | 3.3E-23 | 25 | 201 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 258 | 280 | 22 |
| 2 | 287 | 309 | 22 |
| 3 | 319 | 341 | 22 |
| 4 | 361 | 383 | 22 |
| 5 | 393 | 415 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8627.t1 MKWLNLLPIALGLANASIISFSPPTNPDIIYSLTIPNTTTLSTPGPIYIQITAPTSIQWVGLGQGAQMTGANMFL LYTSSSTKITLSPRSGLGHFEPQYTSNTQITMLPGTGISTINSTTAALTNSSSPSSDNTRTTMTANFRCDNCLTW QDGTGTMNPKDPNFPFIWAYREGVPINSAAMDADISIHDDMGGIQVDLTRAGMPPQPNTSTTEDDQINPFTNYNP ATDSVSVQAPSTPTSPLPNLTKMTHILITHATLMSLSFALFYPLAALLMPLPISLPVSKFRLHMPLQIFTMLMTL AGFGCGIYLAYETGQLKTAHPILGIIVVGVLVLFQPAMGWLQHWGFLRTGGRTGWGVSHRWLGRGVIVVGVVNGG IGLHAARGMGMAPLGAVIGYAVVAGVVGVVYVVGVLVGWVVERRRKRVEGERVDGEGVGEVQRGASVEGRDVREN DGEKGGSVEERDG* |
| Coding | >Ani_SJS100_1|g8627.t1 ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACG AACCCGGACATCATCTACAGCCTCACCATCCCCAACACCACGACCCTCTCCACCCCAGGCCCCATCTACATCCAA ATCACCGCCCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTC CTGTACACCTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACACA AGCAACACCCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAAC AGCTCCTCCCCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCTGG CAAGACGGCACCGGCACGATGAACCCCAAGGACCCAAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCC ATCAACTCGGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGCGGTATCCAAGTCGACCTCACTCGG GCAGGGATGCCCCCGCAACCCAACACCTCCACTACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCA GCTACGGACTCCGTCTCCGTACAAGCCCCCAGCACACCGACCTCCCCGCTCCCCAACCTTACTAAAATGACGCAT ATCCTCATAACCCACGCTACGCTGATGTCCCTCTCCTTCGCGCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCA CTTCCCATATCCCTCCCCGTCTCGAAGTTCCGGCTACATATGCCACTCCAGATCTTCACGATGCTCATGACGCTT GCTGGCTTCGGATGTGGAATTTACCTCGCGTATGAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATT ATTGTGGTCGGGGTGTTGGTGCTGTTTCAACCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGGGG GGGAGGACGGGGTGGGGTGTGTCTCATAGGTGGCTTGGGAGGGGGGTTATTGTGGTGGGCGTGGTTAATGGGGGG ATTGGGTTGCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGGGC GTGGTTGGGGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTGGAGAGGAGGAGGAAGAGGGTGGAGGGG GAGAGGGTAGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGCAAGTGTGGAGGGGAGGGATGTGCGGGAGAAT GATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAG |
| Transcript | >Ani_SJS100_1|g8627.t1 ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACG AACCCGGACATCATCTACAGCCTCACCATCCCCAACACCACGACCCTCTCCACCCCAGGCCCCATCTACATCCAA ATCACCGCCCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTC CTGTACACCTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACACA AGCAACACCCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAAC AGCTCCTCCCCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCTGG CAAGACGGCACCGGCACGATGAACCCCAAGGACCCAAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCC ATCAACTCGGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGCGGTATCCAAGTCGACCTCACTCGG GCAGGGATGCCCCCGCAACCCAACACCTCCACTACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCA GCTACGGACTCCGTCTCCGTACAAGCCCCCAGCACACCGACCTCCCCGCTCCCCAACCTTACTAAAATGACGCAT ATCCTCATAACCCACGCTACGCTGATGTCCCTCTCCTTCGCGCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCA CTTCCCATATCCCTCCCCGTCTCGAAGTTCCGGCTACATATGCCACTCCAGATCTTCACGATGCTCATGACGCTT GCTGGCTTCGGATGTGGAATTTACCTCGCGTATGAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATT ATTGTGGTCGGGGTGTTGGTGCTGTTTCAACCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGGGG GGGAGGACGGGGTGGGGTGTGTCTCATAGGTGGCTTGGGAGGGGGGTTATTGTGGTGGGCGTGGTTAATGGGGGG ATTGGGTTGCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGGGC GTGGTTGGGGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTGGAGAGGAGGAGGAAGAGGGTGGAGGGG GAGAGGGTAGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGCAAGTGTGGAGGGGAGGGATGTGCGGGAGAAT GATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAG |
| Gene | >Ani_SJS100_1|g8627.t1 ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGGTACCACACCCTCCCCATTACCATCTCTACACATC CATCAAACCATACTAACCAAGCTGATTACCAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACGAACCCGGA CATCATCTACAGCCTCACCATCCCCAACACCACGACCCTCTCCACCCCAGGCCCCATCTACATCCAAATCACCGC CCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTCCTGTACAC CTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACACAAGCAACAC CCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAACAGCTCCTC CCCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCTGGCAAGACGG CACCGGCACGATGAACCCCAAGGACCCAAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCCATCAACTC GGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGCGGTATCCAAGTCGACCTCACTCGGGCAGGGAT GCCCCCGCAACCCAACACCTCCACTACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCAGCTACGGA CTCCGTCTCCGTACAAGCCCCCAGCACACCGACCTCCCCGCTCCCCAACCTTACTAAAATGACGCATATCCTCAT AACCCACGCTACGCTGATGTCCCTCTCCTTCGCGCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCACTTCCCAT ATCCCTCCCCGTCTCGAAGTTCCGGCTACATATGCCACTCCAGATCTTCACGATGCTCATGACGCTTGCTGGCTT CGGATGTGGAATTTACCTCGCGTATGAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATTATTGTGGT CGGGGTGTTGGTGCTGTTTCAACCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGGGGGGGAGGAC GGGGTGGGGTGTGTCTCATAGGTGGCTTGGGAGGGGGGTTATTGTGGTGGGCGTGGTTAATGGGGGGATTGGGTT GCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGGGCGTGGTTGG GGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTGGAGAGGAGGAGGAAGAGGGTGGAGGGGGAGAGGGT AGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGCAAGTGTGGAGGGGAGGGATGTGCGGGAGAATGATGGGGA GAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAG |