Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8601.t1
Gene name
Locationscaffold_069:82245..82958
Strand-
Gene length (bp)713
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04178 Got1 Got1/Sft2-like family 1.4E-15 13 115

GO

GO Term Description Terminal node
GO:0016192 vesicle-mediated transport Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 36 58 22
3 79 101 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8601.t1
MPTMWLSDNQKIGVIFCSAGGLFLFGGVLMFFDRSLLAMGNILFLIGLTLIIGLEKTFAFFSRRQKLKGTAAFTA
GILLILLRWPLTGFIIELYGLFILFGDFLITIGQFAGNIPVVGPFIQKVLETLAGGRRNAELPV*
Coding >Ani_SJS100_1|g8601.t1
ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTC
GGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA
ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCT
GGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC
GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTG
GAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG
Transcript >Ani_SJS100_1|g8601.t1
ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTC
GGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA
ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCT
GGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC
GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTG
GAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG
Gene >Ani_SJS100_1|g8601.t1
ATGCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTGCACACTTCGCACGAAAGCATATCCG
GGTCATTGGCTAACGCACGTCCTTCCTACAACAGAGATCGGAGTTATCTTCTGCTCAGCTGGTATGTCTACCTAA
CAGGCTTGCGACGACCTATACAACCAACCGCTCCATACACATACTAACGATGTCCCCCAACAGGAGGCTTGTTCC
TCTTCGGCGGAGTCCTAATGTTCTTCGATCGCTCACTGTACGTCCATATCCAACCCAACTCTATAATCCAAATAC
ATAATATAACTAACAAAACTAACAATCTAGCCTGGCAATGGGAAACGTACGCCGTCCTAAACTACCCTACTCCAA
TGCGATATGTGGGAACCCCCAACTAACCCACTCCACCGCAGATCCTCTTCCTCATCGGCCTCACCCTAATAATCG
GCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCTGGAATCC
TACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACT
TCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGGAGACGC
TGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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