© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8601.t1 |
| Gene name | |
| Location | scaffold_069:82245..82958 |
| Strand | - |
| Gene length (bp) | 713 |
| Transcript length (bp) | 420 |
| Coding sequence length (bp) | 420 |
| Protein length (aa) | 140 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04178 | Got1 | Got1/Sft2-like family | 1.4E-15 | 13 | 115 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 31 | 19 |
| 2 | 36 | 58 | 22 |
| 3 | 79 | 101 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 8749 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8601.t1 MPTMWLSDNQKIGVIFCSAGGLFLFGGVLMFFDRSLLAMGNILFLIGLTLIIGLEKTFAFFSRRQKLKGTAAFTA GILLILLRWPLTGFIIELYGLFILFGDFLITIGQFAGNIPVVGPFIQKVLETLAGGRRNAELPV* |
| Coding | >Ani_SJS100_1|g8601.t1 ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTC GGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCT GGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTG GAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG |
| Transcript | >Ani_SJS100_1|g8601.t1 ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTC GGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCT GGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTG GAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG |
| Gene | >Ani_SJS100_1|g8601.t1 ATGCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTGCACACTTCGCACGAAAGCATATCCG GGTCATTGGCTAACGCACGTCCTTCCTACAACAGAGATCGGAGTTATCTTCTGCTCAGCTGGTATGTCTACCTAA CAGGCTTGCGACGACCTATACAACCAACCGCTCCATACACATACTAACGATGTCCCCCAACAGGAGGCTTGTTCC TCTTCGGCGGAGTCCTAATGTTCTTCGATCGCTCACTGTACGTCCATATCCAACCCAACTCTATAATCCAAATAC ATAATATAACTAACAAAACTAACAATCTAGCCTGGCAATGGGAAACGTACGCCGTCCTAAACTACCCTACTCCAA TGCGATATGTGGGAACCCCCAACTAACCCACTCCACCGCAGATCCTCTTCCTCATCGGCCTCACCCTAATAATCG GCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCTGGAATCC TACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACT TCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGGAGACGC TGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG |