Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8601.t1
Gene name
Locationscaffold_069:82245..82958
Strand-
Gene length (bp)713
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04178 Got1 Got1/Sft2-like family 1.4E-15 13 115

GO

GO Term Description Terminal node
GO:0016192 vesicle-mediated transport Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0006810 transport No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 36 58 22
3 79 101 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup8749
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g2663.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g4545.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g3991.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g2754.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g2165.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g1663.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g4132.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g3300.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g8564.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g8262.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g4391.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g7134.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g2846.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g5835.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g7465.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g7681.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g6308.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g6205.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g3185.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g8601.t1 (this protein)
Aspergillus niger CBS 147371 Ani_SJS27_1|g3200.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g3210.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g4835.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g9124.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8601.t1
MPTMWLSDNQKIGVIFCSAGGLFLFGGVLMFFDRSLLAMGNILFLIGLTLIIGLEKTFAFFSRRQKLKGTAAFTA
GILLILLRWPLTGFIIELYGLFILFGDFLITIGQFAGNIPVVGPFIQKVLETLAGGRRNAELPV*
Coding >Ani_SJS100_1|g8601.t1
ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTC
GGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA
ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCT
GGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC
GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTG
GAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG
Transcript >Ani_SJS100_1|g8601.t1
ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTC
GGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA
ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCT
GGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC
GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTG
GAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG
Gene >Ani_SJS100_1|g8601.t1
ATGCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTGCACACTTCGCACGAAAGCATATCCG
GGTCATTGGCTAACGCACGTCCTTCCTACAACAGAGATCGGAGTTATCTTCTGCTCAGCTGGTATGTCTACCTAA
CAGGCTTGCGACGACCTATACAACCAACCGCTCCATACACATACTAACGATGTCCCCCAACAGGAGGCTTGTTCC
TCTTCGGCGGAGTCCTAATGTTCTTCGATCGCTCACTGTACGTCCATATCCAACCCAACTCTATAATCCAAATAC
ATAATATAACTAACAAAACTAACAATCTAGCCTGGCAATGGGAAACGTACGCCGTCCTAAACTACCCTACTCCAA
TGCGATATGTGGGAACCCCCAACTAACCCACTCCACCGCAGATCCTCTTCCTCATCGGCCTCACCCTAATAATCG
GCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCTGGAATCC
TACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACT
TCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGGAGACGC
TGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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