© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8579.t1 |
| Gene name | |
| Location | scaffold_069:20673..21872 |
| Strand | + |
| Gene length (bp) | 1199 |
| Transcript length (bp) | 999 |
| Coding sequence length (bp) | 999 |
| Protein length (aa) | 333 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02517 | Rce1-like | Type II CAAX prenyl endopeptidase Rce1-like | 1.3E-15 | 151 | 257 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071586 | CAAX-box protein processing | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0004175 | endopeptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0051604 | protein maturation | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0008233 | peptidase activity | No |
| GO:0016485 | protein processing | No |
| GO:0008152 | metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008237 | metallopeptidase activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006508 | proteolysis | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 102 | 124 | 22 |
| 4 | 230 | 252 | 22 |
| 5 | 293 | 315 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 8725 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8579.t1 MAPVGLLTKLRTLITKDYDEPAISTQTAAFLSVCLTLVYVVPFYVNPTTRPSPTLSRDAPSVIRARIRAVTFSCT ISSLVVLWLVAAKENASFSRALHFLGWWPIGLVDIFRSLLLTAILFAGPLFERGVAEGEWREWIRGGRVTASLRS WIGWRNYVAGPITEEVMFRSAIVPLHLLAKVDPGRIVFVAPLYFGIAHVHHFYEFRLTHPDTSIIAAILRSVFQF GYTTIFGWYATFVYLRTGSLLAVILAHTFCNWCGLPRLWGRVEAGVPIGPPMVKGKGSSDVTYGQLSLGWTVAYY VILVAGAIGFFQTLWPLTESLNALASFSGATK* |
| Coding | >Ani_SJS100_1|g8579.t1 ATGGCTCCCGTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATGATGAGCCTGCCATTTCAACA CAAACAGCCGCCTTTCTCTCGGTTTGCCTCACCCTCGTCTATGTGGTTCCCTTTTATGTGAACCCGACGACCCGG CCATCGCCCACCCTGAGTAGAGATGCGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACC ATTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTCTTTCTCTCGAGCTCTCCATTTCCTG GGGTGGTGGCCTATTGGTCTCGTGGATATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTG TTTGAGCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGGAAGAGTCACTGCATCGCTTCGCAGC TGGATTGGATGGAGGAATTATGTCGCGGGTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTT CATCTCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTATTTCGGCATTGCTCACGTACAC CATTTCTACGAGTTTCGCCTCACGCATCCTGATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTC GGTTACACAACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGCTCTCTTCTGGCAGTTATTCTT GCCCACACTTTCTGCAACTGGTGCGGATTACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCC CCCATGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTTGGCTGGACCGTCGCATACTAC GTAATCCTGGTCGCGGGAGCTATTGGCTTCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCC AGCTTTTCTGGTGCGACAAAATAA |
| Transcript | >Ani_SJS100_1|g8579.t1 ATGGCTCCCGTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATGATGAGCCTGCCATTTCAACA CAAACAGCCGCCTTTCTCTCGGTTTGCCTCACCCTCGTCTATGTGGTTCCCTTTTATGTGAACCCGACGACCCGG CCATCGCCCACCCTGAGTAGAGATGCGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACC ATTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTCTTTCTCTCGAGCTCTCCATTTCCTG GGGTGGTGGCCTATTGGTCTCGTGGATATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTG TTTGAGCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGGAAGAGTCACTGCATCGCTTCGCAGC TGGATTGGATGGAGGAATTATGTCGCGGGTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTT CATCTCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTATTTCGGCATTGCTCACGTACAC CATTTCTACGAGTTTCGCCTCACGCATCCTGATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTC GGTTACACAACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGCTCTCTTCTGGCAGTTATTCTT GCCCACACTTTCTGCAACTGGTGCGGATTACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCC CCCATGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTTGGCTGGACCGTCGCATACTAC GTAATCCTGGTCGCGGGAGCTATTGGCTTCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCC AGCTTTTCTGGTGCGACAAAATAA |
| Gene | >Ani_SJS100_1|g8579.t1 ATGGCTCCCGTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATGGTAAACTTGTGAACTATAAG ATTCTTCTATCTTTGTCTGACTTATTCCGTAGATGAGCCTGCCATTTCAACACAAACAGCCGCCTTTCTCTCGGT ATGCATTTCTGACCATCAGCTCCTACCAACTCTCCCACGTGCTTTTGGCCTTCTTATTGCTCTTCTGGCCAGTAT CTGATTCAAGTACTAGGTTTGCCTCACCCTCGTCTATGTGGTTCCCTTTTATGTGAACCCGACGACCCGGCCATC GCCCACCCTGAGTAGAGATGCGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACCATTAG CAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTCTTTCTCTCGAGCTCTCCATTTCCTGGGGTG GTGGCCTATTGGTCTCGTGGATATCTTCCGCAGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTGTTTGA GCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGGAAGAGTCACTGCATCGCTTCGCAGCTGGAT TGGATGGAGGAATTATGTCGCGGTAAGTCCAGTTTGCGACGGCAATGTCTGGCTTTAAGATTAACTGGGCGATGC AGGGTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTTCATCTCCTTGCCAAGGTTGATCCCG GCCGCATTGTATTTGTGGCTCCTCTCTATTTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGC ATCCTGATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTCGGTTACACAACGATTTTCGGCTGGT ATGCCACCTTTGTCTACCTTCGTACTGGCTCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCG GATTACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCCATGGTCAAAGGAAAAGGATCCT CAGACGTGACATACGGTCAACTCAGTCTTGGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTG GCTTCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGCTTTTCTGGTGCGACAAAATAA |