Protein ID | Ani_SJS100_1|g8575.t1 |
Gene name | |
Location | scaffold_069:11237..13212 |
Strand | + |
Gene length (bp) | 1975 |
Transcript length (bp) | 1674 |
Coding sequence length (bp) | 1674 |
Protein length (aa) | 558 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00646 | F-box | F-box domain | 4.2E-07 | 138 | 177 |
PF12937 | F-box-like | F-box-like | 1.5E-05 | 138 | 182 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8575.t1 MARVVRGEGDSLQKRGQLLFRQGNYSDALAAFTEALSCKGADVMSILDNRAATYIKLTQYDRALNDSRQMIRRDT KDGRGVLRYGQTLLLTGDRAKALKAYGYGLKTLPEDHPRRKMILQMYCKVKERASVKRLDPFDTLPLELAMMVLQ HFNFRELAVLLRVSKGWQRMLSQPDLWMHLDFTEARRKVHWRSFRAFVQRSRALLTHAVMTNISTPFQDRVLEAL SRCPKLEHLEIRDPITQPNGLYDVFRSSTQLKSLVIGKQTPVAQENIAKFLSSLTQLELLEIHNAQPSPESRVHW PSHLPNLRSIALFTEASMPAPGRVPALYIPPATESMSCSMPNLEELRLDSYPKVWAPYNLSFDPVQFPRLRKLDL KGVFVGPFGLPPSLEYLSIHAGAAPTGEEFPFSPEQLLHLPSLHTLILRDLIWVTYRTLHGFIVDSKASLRNLVV DRCPQLDTGKLSLVLVENSVNLTELGVPQLPGINDSTVKTLVEGLSNLTALDVSKTDVTGYLLKMLADARSSNVD FPRVEYVYIKNCDNIPYEAITYARSHGVNVIR* |
Coding | >Ani_SJS100_1|g8575.t1 ATGGCGCGCGTAGTCCGCGGCGAGGGGGACTCCCTGCAAAAGAGAGGACAGCTGCTCTTTAGGCAGGGCAACTAC TCAGACGCTCTGGCTGCGTTCACTGAGGCTCTCTCTTGTAAAGGTGCCGATGTGATGAGCATTCTGGACAACCGC GCCGCAACGTATATCAAGCTTACGCAGTATGATCGCGCTCTCAATGACTCGCGACAGATGATCCGCAGGGACACC AAAGATGGACGGGGCGTTTTGCGATATGGTCAGACATTACTTTTGACTGGAGATCGTGCAAAGGCTCTCAAAGCT TATGGGTATGGATTGAAAACCTTGCCTGAAGATCATCCCCGTCGTAAGATGATACTGCAAATGTACTGCAAGGTG AAAGAAAGAGCGTCAGTGAAACGACTAGATCCCTTTGATACTCTACCTCTTGAGTTGGCCATGATGGTGCTGCAG CATTTCAATTTCAGGGAGCTGGCGGTCCTCCTGCGCGTTTCAAAGGGATGGCAGCGAATGCTTTCACAACCAGAT CTTTGGATGCACCTGGATTTCACTGAAGCCCGACGCAAGGTCCATTGGCGCTCCTTTCGGGCATTTGTCCAGCGC TCGCGTGCCTTGCTAACTCATGCTGTCATGACCAACATATCTACCCCTTTTCAGGACAGAGTGCTAGAAGCTTTG AGTAGATGTCCAAAATTGGAACACCTGGAGATCCGGGACCCTATCACACAACCTAATGGACTTTACGACGTGTTC AGGAGCTCAACGCAATTGAAATCTCTAGTTATCGGGAAACAGACACCTGTGGCTCAAGAAAATATCGCGAAGTTT CTATCAAGCTTAACGCAGCTTGAACTGCTAGAGATTCATAATGCCCAGCCGTCGCCTGAATCCAGAGTACACTGG CCCTCACATCTGCCGAATTTGAGGAGCATTGCCCTGTTCACAGAAGCATCAATGCCGGCCCCAGGTCGTGTTCCT GCTTTATACATTCCTCCTGCTACTGAATCAATGTCTTGCTCAATGCCTAATCTTGAAGAGCTACGGCTGGACTCT TATCCCAAAGTCTGGGCGCCATACAACCTTTCATTTGACCCAGTTCAATTCCCCAGGCTACGTAAACTAGATCTG AAAGGTGTATTCGTAGGTCCTTTCGGTTTACCGCCGAGTCTCGAATATCTTTCCATTCATGCGGGTGCCGCTCCG ACTGGGGAGGAATTCCCCTTTTCTCCGGAGCAACTCCTACACCTTCCGAGTCTTCATACTCTTATACTTCGCGAC CTTATTTGGGTCACCTACCGCACACTTCATGGGTTCATAGTCGACTCCAAGGCTTCATTACGGAATCTCGTGGTC GATCGGTGTCCGCAACTCGACACTGGGAAGCTCAGTCTTGTTCTGGTAGAGAATTCGGTCAATTTGACCGAGCTC GGAGTTCCTCAGCTTCCAGGCATCAACGACTCCACCGTGAAGACCTTGGTAGAAGGCTTGTCAAACCTTACAGCT CTGGATGTCTCCAAGACCGATGTTACAGGTTATCTGCTCAAAATGCTTGCTGACGCACGTTCCTCGAATGTCGAC TTTCCACGTGTCGAGTATGTATACATCAAAAATTGTGACAATATCCCGTACGAGGCAATTACCTACGCTCGGTCA CATGGAGTCAATGTCATTCGGTGA |
Transcript | >Ani_SJS100_1|g8575.t1 ATGGCGCGCGTAGTCCGCGGCGAGGGGGACTCCCTGCAAAAGAGAGGACAGCTGCTCTTTAGGCAGGGCAACTAC TCAGACGCTCTGGCTGCGTTCACTGAGGCTCTCTCTTGTAAAGGTGCCGATGTGATGAGCATTCTGGACAACCGC GCCGCAACGTATATCAAGCTTACGCAGTATGATCGCGCTCTCAATGACTCGCGACAGATGATCCGCAGGGACACC AAAGATGGACGGGGCGTTTTGCGATATGGTCAGACATTACTTTTGACTGGAGATCGTGCAAAGGCTCTCAAAGCT TATGGGTATGGATTGAAAACCTTGCCTGAAGATCATCCCCGTCGTAAGATGATACTGCAAATGTACTGCAAGGTG AAAGAAAGAGCGTCAGTGAAACGACTAGATCCCTTTGATACTCTACCTCTTGAGTTGGCCATGATGGTGCTGCAG CATTTCAATTTCAGGGAGCTGGCGGTCCTCCTGCGCGTTTCAAAGGGATGGCAGCGAATGCTTTCACAACCAGAT CTTTGGATGCACCTGGATTTCACTGAAGCCCGACGCAAGGTCCATTGGCGCTCCTTTCGGGCATTTGTCCAGCGC TCGCGTGCCTTGCTAACTCATGCTGTCATGACCAACATATCTACCCCTTTTCAGGACAGAGTGCTAGAAGCTTTG AGTAGATGTCCAAAATTGGAACACCTGGAGATCCGGGACCCTATCACACAACCTAATGGACTTTACGACGTGTTC AGGAGCTCAACGCAATTGAAATCTCTAGTTATCGGGAAACAGACACCTGTGGCTCAAGAAAATATCGCGAAGTTT CTATCAAGCTTAACGCAGCTTGAACTGCTAGAGATTCATAATGCCCAGCCGTCGCCTGAATCCAGAGTACACTGG CCCTCACATCTGCCGAATTTGAGGAGCATTGCCCTGTTCACAGAAGCATCAATGCCGGCCCCAGGTCGTGTTCCT GCTTTATACATTCCTCCTGCTACTGAATCAATGTCTTGCTCAATGCCTAATCTTGAAGAGCTACGGCTGGACTCT TATCCCAAAGTCTGGGCGCCATACAACCTTTCATTTGACCCAGTTCAATTCCCCAGGCTACGTAAACTAGATCTG AAAGGTGTATTCGTAGGTCCTTTCGGTTTACCGCCGAGTCTCGAATATCTTTCCATTCATGCGGGTGCCGCTCCG ACTGGGGAGGAATTCCCCTTTTCTCCGGAGCAACTCCTACACCTTCCGAGTCTTCATACTCTTATACTTCGCGAC CTTATTTGGGTCACCTACCGCACACTTCATGGGTTCATAGTCGACTCCAAGGCTTCATTACGGAATCTCGTGGTC GATCGGTGTCCGCAACTCGACACTGGGAAGCTCAGTCTTGTTCTGGTAGAGAATTCGGTCAATTTGACCGAGCTC GGAGTTCCTCAGCTTCCAGGCATCAACGACTCCACCGTGAAGACCTTGGTAGAAGGCTTGTCAAACCTTACAGCT CTGGATGTCTCCAAGACCGATGTTACAGGTTATCTGCTCAAAATGCTTGCTGACGCACGTTCCTCGAATGTCGAC TTTCCACGTGTCGAGTATGTATACATCAAAAATTGTGACAATATCCCGTACGAGGCAATTACCTACGCTCGGTCA CATGGAGTCAATGTCATTCGGTGA |
Gene | >Ani_SJS100_1|g8575.t1 ATGGCGCGCGTAGTCCGCGGCGAGGGGGACTCCCTGCAAAAGAGAGGACAGCTGCTCTTTAGGCAGGGCAACTAC TCAGACGCTCTGGCTGCGTTCACTGAGGTGCGTTCGCGCGGTCCACCATGTCCGATAAGGGAAACGCTACTAAGA AAATTGGCCCACAGGCTCTCTCTTGTAAAGGTGCCGATGTGATGAGCATTCTGGACAACCGCGCCGCAACGTATA TCAAGCTTACGCAGTATGATCGCGCTCTCAATGACTCGCGACAGATGATCCGCAGGGACACCAAAGATGGACGGG TAGCTTGCAGCCTGTGCGATCGTCAGTTGCGTTTACTGTAGGCTAATTGAGCATTTAGGGCGTTTTGCGATATGG TCAGACATTACTTTTGACTGGAGATCGTGCAAAGGCTCTCAAAGCTTATGGGTATGGATTGAAAACCTTGCCTGA AGATCATCCCCGTCGTAAGGTAAGTGGCTTTGAACTGAGCTCACAGCGAGATGTGTTTATGGACGCTGACTGGCT CAGATGATACTGCAAATGTACTGCAAGGTGAAAGAAAGAGCGTCAGTGAAACGACTAGATCCCTTTGATACTCTA CCTCTTGAGTTGGCCATGATGGTGCTGCAGCATTTCAATTTCAGGGAGCTGGCGTGAGTGAGCGTCCAAATTAGA AGTCCAACGAGCAAGCTGACGACTAGGCTTCTAGGGTCCTCCTGCGCGTTTCAAAGGGATGGCAGCGAATGCTTT CACAACCAGATCTTTGGATGCACCTGGATTTCACTGAAGCCCGACGCAAGGTCCATTGGCGCTCCTTTCGGGCAT TTGTCCAGCGCTCGCGTGCCTTGCTAACTCATGCTGTCATGACCAACATATCTACCCCTTTTCAGGACAGAGTGC TAGAAGCTTTGAGTAGATGTCCAAAATTGGAACACCTGGAGATCCGGGACCCTATCACACAACCTAATGGACTTT ACGACGTGTTCAGGAGCTCAACGCAATTGAAATCTCTAGTTATCGGGAAACAGACACCTGTGGCTCAAGAAAATA TCGCGAAGTTTCTATCAAGCTTAACGCAGCTTGAACTGCTAGAGATTCATAATGCCCAGCCGTCGCCTGAATCCA GAGTACACTGGCCCTCACATCTGCCGAATTTGAGGAGCATTGCCCTGTTCACAGAAGCATCAATGCCGGCCCCAG GTCGTGTTCCTGCTTTATACATTCCTCCTGCTACTGTAAGTTGAGCTGGTCTTACGTGCTTAGCTGGCTGCATGC TGCTTCTTGTACTAACAGATTTAAGGAATCAATGTCTTGCTCAATGCCTAATCTTGAAGAGCTACGGCTGGACTC TTATCCCAAAGTCTGGGCGCCATACAACCTTTCATTTGACCCAGTTCAATTCCCCAGGCTACGTAAACTAGATCT GAAAGGTGTATTCGTAGGTCCTTTCGGTTTACCGCCGAGTCTCGAATATCTTTCCATTCATGCGGGTGCCGCTCC GACTGGGGAGGAATTCCCCTTTTCTCCGGAGCAACTCCTACACCTTCCGAGTCTTCATACTCTTATACTTCGCGA CCTTATTTGGGTCACCTACCGCACACTTCATGGGTTCATAGTCGACTCCAAGGCTTCATTACGGAATCTCGTGGT CGATCGGTGTCCGCAACTCGACACTGGGAAGCTCAGTCTTGTTCTGGTAGAGAATTCGGTCAATTTGACCGAGCT CGGAGTTCCTCAGCTTCCAGGCATCAACGACTCCACCGTGAAGACCTTGGTAGAAGGCTTGTCAAACCTTACAGC TCTGGATGTCTCCAAGACCGATGTTACAGGTTATCTGCTCAAAATGCTTGCTGACGCACGTTCCTCGAATGTCGA CTTTCCACGTGTCGAGTATGTATACATCAAAAATTGTGACAATATCCCGTACGAGGCAATTACCTACGCTCGGTC ACATGGAGTCAATGTCATTCGGTGA |