© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g857.t1 |
| Gene name | |
| Location | scaffold_003:125155..126400 |
| Strand | - |
| Gene length (bp) | 1245 |
| Transcript length (bp) | 933 |
| Coding sequence length (bp) | 933 |
| Protein length (aa) | 311 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00153 | Mito_carr | Mitochondrial carrier protein | 3.7E-18 | 5 | 96 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 1.2E-17 | 110 | 203 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 4.7E-12 | 212 | 294 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 111 | 133 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g857.t1 MSTTTGAFIAGGVAACGAVTVTHSFETVKIRLQLQGELQAKQDAAKKYRGVLHGVKVILQNEGPRGLFRGIGSAY IYQVLLNGCRLGFYEPLRQGLATTIYQDAQVQSLGINVLAGAASGIIGAAAGSPFFLVKTRLQSFSPFLPVGTQH NYKNSFDGLRKIHTSEGVSGLYRGVGAAMVRTGFGSSVQLPTYFFAKRRLMKHLGMEDGPGLHLASSTASGFVVC CVMHPPDTIMSRMYNQTGNLYKGVFDCLFKTIKTEGVLAIYKGYFAHLARILPHTILTLSLAEQTNKIMRRLEDR FLSDSLKENL* |
| Coding | >Ani_SJS100_1|g857.t1 ATGTCCACAACAACAGGAGCATTCATCGCAGGAGGTGTTGCAGCATGCGGAGCAGTGACGGTTACTCATAGCTTT GAGACGGTGAAGATTCGTCTGCAACTGCAGGGCGAACTGCAGGCCAAGCAGGACGCTGCCAAGAAATACCGGGGT GTCTTGCACGGTGTGAAGGTTATTCTACAGAATGAGGGTCCCCGCGGTCTTTTCCGGGGTATAGGCTCGGCATAT ATCTACCAAGTCCTGCTCAACGGTTGCCGTCTGGGTTTCTACGAACCGCTGCGCCAGGGTCTGGCAACCACAATA TACCAGGATGCTCAAGTTCAATCGCTGGGTATTAACGTCCTCGCTGGTGCTGCTTCTGGTATCATTGGAGCTGCC GCGGGTTCGCCCTTTTTCCTCGTCAAGACCCGTCTGCAATCGTTCTCCCCTTTCCTTCCCGTCGGCACCCAGCAC AACTACAAGAACTCGTTTGATGGACTGCGGAAGATCCACACGTCGGAGGGAGTTTCTGGCTTATACCGTGGAGTT GGCGCGGCAATGGTACGAACTGGTTTCGGTAGTTCCGTTCAGCTGCCGACCTACTTCTTCGCGAAGCGCCGCTTG ATGAAGCACCTGGGCATGGAAGATGGTCCAGGCCTGCACCTGGCCAGTAGCACGGCATCTGGCTTTGTCGTCTGC TGTGTTATGCACCCACCCGACACCATTATGTCTAGAATGTACAACCAAACCGGCAATCTCTACAAGGGCGTGTTC GATTGCTTGTTCAAGACCATCAAGACGGAGGGTGTGTTGGCTATCTACAAGGGGTACTTTGCTCATCTTGCGCGT ATTCTGCCTCACACGATCTTGACCTTGAGTTTGGCCGAGCAGACCAACAAAATCATGCGCAGACTGGAGGATCGG TTCCTGTCTGACTCGTTGAAGGAGAACTTGTAG |
| Transcript | >Ani_SJS100_1|g857.t1 ATGTCCACAACAACAGGAGCATTCATCGCAGGAGGTGTTGCAGCATGCGGAGCAGTGACGGTTACTCATAGCTTT GAGACGGTGAAGATTCGTCTGCAACTGCAGGGCGAACTGCAGGCCAAGCAGGACGCTGCCAAGAAATACCGGGGT GTCTTGCACGGTGTGAAGGTTATTCTACAGAATGAGGGTCCCCGCGGTCTTTTCCGGGGTATAGGCTCGGCATAT ATCTACCAAGTCCTGCTCAACGGTTGCCGTCTGGGTTTCTACGAACCGCTGCGCCAGGGTCTGGCAACCACAATA TACCAGGATGCTCAAGTTCAATCGCTGGGTATTAACGTCCTCGCTGGTGCTGCTTCTGGTATCATTGGAGCTGCC GCGGGTTCGCCCTTTTTCCTCGTCAAGACCCGTCTGCAATCGTTCTCCCCTTTCCTTCCCGTCGGCACCCAGCAC AACTACAAGAACTCGTTTGATGGACTGCGGAAGATCCACACGTCGGAGGGAGTTTCTGGCTTATACCGTGGAGTT GGCGCGGCAATGGTACGAACTGGTTTCGGTAGTTCCGTTCAGCTGCCGACCTACTTCTTCGCGAAGCGCCGCTTG ATGAAGCACCTGGGCATGGAAGATGGTCCAGGCCTGCACCTGGCCAGTAGCACGGCATCTGGCTTTGTCGTCTGC TGTGTTATGCACCCACCCGACACCATTATGTCTAGAATGTACAACCAAACCGGCAATCTCTACAAGGGCGTGTTC GATTGCTTGTTCAAGACCATCAAGACGGAGGGTGTGTTGGCTATCTACAAGGGGTACTTTGCTCATCTTGCGCGT ATTCTGCCTCACACGATCTTGACCTTGAGTTTGGCCGAGCAGACCAACAAAATCATGCGCAGACTGGAGGATCGG TTCCTGTCTGACTCGTTGAAGGAGAACTTGTAG |
| Gene | >Ani_SJS100_1|g857.t1 ATGTCCACAACAACAGGGTACGTGGTGCTGCCTCCAAACCCGTCAGATTACGGTCGCATTAACGCATAAATTCGT TCCCTACAGAGCATTCATCGCAGGAGGTGTTGCAGCATGCGGAGCAGTGACGGTTACTCATAGCTTTGAGACGGT GAAGATTCGGTACAGTCTTCCTCCCTTATTTGGAGTGTCGCGGATTACTCCTCGCCAGCCGTGTCGCCGGATTCT AATTTGTATCTATACGAAAGTCTGCAACTGCAGGGCGAACTGCAGGCCAAGCAGGACGCTGCCAAGAAATACCGG GGTGTCTTGCACGGTGTGAAGGTTATTCTACAGAATGAGGGTCCCCGCGGTCTTTTCCGGGGTATAGGCTCGGCA GTACGTTCGCCTATCAGCGTCCAAGATACTTGTATAGCTAACAGCCACTGCAGTATATCTACCAAGTCCTGCTCA ACGGTTGCCGTCTGGGTTTCTACGAACCGCTGCGCCAGGGTCTGGCAACCACAATATACCAGGATGCTCAAGTTC AATCGCTGGGTATTAACGTCCTCGCTGGTGCTGCTTCTGGTATCATTGGAGCTGCCGCGGGTTCGCCCTTTTTCC TCGTCAAGACCCGTCTGCAATCGTTCTCCCCTTTCCTTCCCGTCGGCACCCAGCACAACTACAAGAACTCGTTTG ATGGACTGCGGAAGATCCACACGTCGGAGGGAGTTTCTGGCTTATACCGTGGAGTTGGCGCGGCAATGGTACGAA CTGGTTTCGGTAGTTCCGTTCAGCTGCCGACCTACTTCTTCGCGAAGCGCCGCTTGATGAAGCACCTGGGCATGG AAGATGGTCCAGGCCTGCACCTGGCCAGTAGCACGGCATCTGGCTTTGTCGTCTGCTGTGTTATGCACCCACCCG GTATGTTGTACACTCATGGCATGACCGAATTCCGCTAACTTGTTGTTTAGACACCATTATGTCTAGAATGTACAA CCAAACCGGCAATCTCTACAAGGGCGTGTTCGATTGCTTGTTCAAGACCATCAAGACGGAGGGTGTGTTGGCTAT CTACAAGGGGTACTTTGCTCATCTTGCGCGTATTCTGCCTCACACGGTAAGTGGTGTTTTAACATTCCCCCGCCC ATAGGCGATTTACTAACCCGGCTGTAGATCTTGACCTTGAGTTTGGCCGAGCAGACCAACAAAATCATGCGCAGA CTGGAGGATCGGTTCCTGTCTGACTCGTTGAAGGAGAACTTGTAG |