© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g856.t1 |
| Gene name | |
| Location | scaffold_003:121876..123304 |
| Strand | - |
| Gene length (bp) | 1428 |
| Transcript length (bp) | 1191 |
| Coding sequence length (bp) | 1191 |
| Protein length (aa) | 397 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00268 | Ribonuc_red_sm | Ribonucleotide reductase, small chain | 1.6E-121 | 77 | 345 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009263 | deoxyribonucleotide biosynthetic process | Yes |
| GO:0044281 | small molecule metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:1901293 | nucleoside phosphate biosynthetic process | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0009262 | deoxyribonucleotide metabolic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0009165 | nucleotide biosynthetic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034654 | nucleobase-containing compound biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 223 | 245 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g856.t1 MSVQLTPSKQAASSLENLKMSDSPVKKLNFGGKENAPAAVDVTADKPVEKPVEAPKVAPGIKEMEASEPLLQENP HRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERYFISHVLAFFAASDGIVNENLVERFSG EVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLV AFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGIEQ EFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKTNFFEKRVGDYQKAGVMA STKKEEEVKTNSNGLSFDEDF* |
| Coding | >Ani_SJS100_1|g856.t1 ATGTCTGTACAACTCACTCCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGCCTGTC AAGAAGCTCAACTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAG CCCGTCGAAGCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAAACCCT CACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGG ACCGCCGAGGAAATCGATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTC ATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGC GAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGAGACCTAC TCTCTCCTGATCGATACCTACATCAAGGAGCCCAAGCAGCGCACCTACCTCTTTGACGCTATTGATACTATCCCC TGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTCTCGTT GCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC ATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTG TTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAG GAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTT GTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG TCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAGAAGGCTGGTGTCATGGCC AGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAA |
| Transcript | >Ani_SJS100_1|g856.t1 ATGTCTGTACAACTCACTCCCTCCAAGCAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGCCTGTC AAGAAGCTCAACTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCGAGAAG CCCGTCGAAGCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAAACCCT CACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGG ACCGCCGAGGAAATCGATCTGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTC ATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGC GAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATGGAGAACATCCACTCCGAGACCTAC TCTCTCCTGATCGATACCTACATCAAGGAGCCCAAGCAGCGCACCTACCTCTTTGACGCTATTGATACTATCCCC TGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTCTCGTT GCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC ATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTG TTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAG GAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTT GTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG TCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAGAAGGCTGGTGTCATGGCC AGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCCTCAGCTTCGATGAAGACTTCTAA |
| Gene | >Ani_SJS100_1|g856.t1 ATGTCTGTACAACTCACTCCCTCCAAGCAGGTATGTGATGTCACGTCTCTCGCCTCCCACTTTCGACGCGTAATT AAAGGCAGATAAGCTAACACGCGTTGCTTGCATAGGCTGCTTCCTCCCTCGAGAACCTCAAGATGAGCGACTCGC CTGTCAAGAAGCTCAACTTCGGTGGCAAGGAGAACGCGCCTGCCGCCGTTGACGTGACTGCCGACAAGCCCGTCG AGAAGCCCGTCGAAGCCCCCAAGGTTGCGCCCGGTATCAAGGAGATGGAGGCCAGCGAGCCTCTGCTTCAGGAAA ACCCTCACCGTTTCGTCCTTTTCCCCATCAAGTACCATGAGGTGAGTGACACGTCCGTTACGCGTCACGCGTAAA GTGGAATTTTGCGCTTCCCGCCCCGCAACAATTGGCATGTGCGCTAACGCCGCATTCTCGCACCCTACAGATCTG GCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTGTCCAAGGATTTGCACGACTG GCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCCCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCAT TGTCAACGAGAACCTTGTCGAGCGCTTCAGCGGCGAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCA GATCATGATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTACATCAAGGAGCCCAAGCAGCG CACCTACCTCTTTGACGCTATTGATACTAGTATGTACCTCCAACCGGGGTTGTGATTGGTCAATGGATGCTAACC GCTGCAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCT CAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTCAAG AAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTC GCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTC GGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAG TACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTC GACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAGAAGGCT GGTGTCATGGCCAGCACGAAGAAGGAAGAGGAGGTCAAGACCAACAGCAACGGCCTCAGCTTCGATGAAGACTTC TAA |