Protein ID | Ani_SJS100_1|g8549.t1 |
Gene name | |
Location | scaffold_068:127427..129652 |
Strand | - |
Gene length (bp) | 2225 |
Transcript length (bp) | 1191 |
Coding sequence length (bp) | 1191 |
Protein length (aa) | 397 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00295 | Glyco_hydro_28 | Glycosyl hydrolases family 28 | 3.2E-35 | 76 | 388 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0004650 | polygalacturonase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0016787 | hydrolase activity | No |
GO:0008150 | biological_process | No |
GO:0044238 | primary metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8549.t1 MAPIALKILLFTSLIVPSISLSDQARNGHARTICEVKPGGSSEIDDVPAIVDALTTCGSGGRVIFSNNTYHINSV MNTTWLDDVEIDLQGTLLWSTNISYWLNHSLPVGYQNQSTAWILGGKDIVFEGHGYGTFNGSGQTWYKYVGSTSN YPRRPNQLTVSGAMGAVFKGLRFVQSQMWTMSIIHTSNSWFDSIYVNNLYDDGDSAQNTDGANTIYSNNITFTNW EVVNGDDSISTKANSTDITIANCTFTSGLGIAIGSIGQYNGAFETVERLKISNITYEKTTHAVYFKTWTGDQVGY PPNGGGGGLGYASDIVATNLKTNNLKGAPFTISQCTTFSGASGNCTNSKFQIRDLVFINISGTTDSSEVASFQCS AVAPCEDITIENTVCSKLATS* |
Coding | >Ani_SJS100_1|g8549.t1 ATGGCACCTATAGCGTTGAAAATCCTCCTTTTTACCTCTCTCATTGTCCCTTCCATCTCCCTATCGGACCAAGCG AGGAATGGTCATGCAAGAACAATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTT ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTAC TGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTC TTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAAT TACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAG AGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTAT GATGACGGCGATTCAGCACAGAACACCGACGGCGCAAATACTATCTACAGCAACAACATCACATTCACGAACTGG GAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTC ACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAG ATCTCGAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATAT CCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTC AAAGGTGCTCCATTTACAATCTCTCAGTGCACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTT CAGATTCGCGATCTTGTCTTCATCAATATCTCTGGAACGACAGACTCCTCAGAAGTTGCGAGCTTTCAGTGTAGT GCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATACAGTCTGCTCCAAGCTAGCTACCTCATAA |
Transcript | >Ani_SJS100_1|g8549.t1 ATGGCACCTATAGCGTTGAAAATCCTCCTTTTTACCTCTCTCATTGTCCCTTCCATCTCCCTATCGGACCAAGCG AGGAATGGTCATGCAAGAACAATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTT ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTAC TGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTC TTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAAT TACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAG AGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTAT GATGACGGCGATTCAGCACAGAACACCGACGGCGCAAATACTATCTACAGCAACAACATCACATTCACGAACTGG GAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTC ACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAG ATCTCGAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATAT CCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTC AAAGGTGCTCCATTTACAATCTCTCAGTGCACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTT CAGATTCGCGATCTTGTCTTCATCAATATCTCTGGAACGACAGACTCCTCAGAAGTTGCGAGCTTTCAGTGTAGT GCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATACAGTCTGCTCCAAGCTAGCTACCTCATAA |
Gene | >Ani_SJS100_1|g8549.t1 ATGGCACCTATAGCGTTGAAAATCCTCCTTTTTACCTCTCTCATTGTCCCTTCCATCTCCCTATCGGACCAAGCG AGGAATGGTCATGCAAGAACAATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTT ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGGTAAATAAATTACCTTTGTAT GTAATGTTAGTTTCTTGTTTGTTTCTGACAATGGACAGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCC TCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGAT ACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGCGACCGA ACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGTAGG TATCGTTATTCATTTTGCGCCATCTTGCTAAATGAATGCATGTTGCTAACAATACAGGACAATGTCTATCATTCA CACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACGTTAGTACCA TTCCGCATGTTGAATCGGGACGCAAGTCACGCCTCTGACCCTAGTTAAATAGAGAACACCGACGGCGCAAATACT ATCTACAGCAACAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAAT TCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATAT AATGGTGCTTTTGAGACTGTTGAACGCCTTAAGATCTCGAACATCACATATGAGAAGACAACTCATGCCGTGTAC TTCAAGACCTGGACGGGTGACCAGGTCGGATATCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGTACGTCCACG TAATTTTATCCAAGTCCTTTGTTGATTTTAACCATACTACCATGGCAGATGCATCCGACATCGTCGCAACCAACT TGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGCACGACGTTCTCTGGTGCTTCAGGGAACT GCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCATCAATATCTCTGGAACGACAGACTCCTCAGAAGTTG CGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGGGGA ATACGACCCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGT GTGTTGGATCAAGTGCTACTGGGGGATGTTAGCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAAGTTCTCCGGT AGCATAATTACTGAACAGCTTGATTAAGCATTAAGTTGTGTATGTCCAGCTACTGATGTGATTGATTTGAATTTC AGCAAACCTGTTTGGTTGCCAACGTAGTTATAGTAACTACGATGTTGATGTTGATGGGCATGTACCGATTGCTGA TTCTGAACGCCTCCAATATAATAACAAAACATACAAGCCCATTATTCTTTTAGCTATAGAAGACTTCAGTTCTAT ACCAGACCAGGACCAGCCCTTTGGTAAGCACCATAACTCCAGCTCAGGGTAATATAGTTGTGTATAGAATATGCA GTTAGGGCCCGTGGGAGTGCTAATGTTGGGCTGGTGTCAATGCGAAATAAAAAAGAAAGGATAACATAATATTCT TTCTATCAGCGTGGAAGGATTGGATCAATGCTCTTCTTGTCCGTTTGTGGGTGGACTGTTGCATGCTCCTTTAAC GGCTATCACGGTCATCCTGATCGCCAGTGTCCCCAAGGACAACCTACACATAAAGCTGCTGCTAATAGACGTGAA AGCAAAGCACCTTGTTAAGGACTGCTCAACGGCCAACAGAACGTGGAATATATAGCACAGAGCTGCTATGTATGA GGCTAAGTTGAATATTGCAGACAGTCTGCTCCAAGCTAGCTACCTCATAA |