Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8549.t1
Gene name
Locationscaffold_068:127427..129652
Strand-
Gene length (bp)2225
Transcript length (bp)1191
Coding sequence length (bp)1191
Protein length (aa) 397

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00295 Glyco_hydro_28 Glycosyl hydrolases family 28 3.2E-35 76 388

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004650 polygalacturonase activity Yes
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8549.t1
MAPIALKILLFTSLIVPSISLSDQARNGHARTICEVKPGGSSEIDDVPAIVDALTTCGSGGRVIFSNNTYHINSV
MNTTWLDDVEIDLQGTLLWSTNISYWLNHSLPVGYQNQSTAWILGGKDIVFEGHGYGTFNGSGQTWYKYVGSTSN
YPRRPNQLTVSGAMGAVFKGLRFVQSQMWTMSIIHTSNSWFDSIYVNNLYDDGDSAQNTDGANTIYSNNITFTNW
EVVNGDDSISTKANSTDITIANCTFTSGLGIAIGSIGQYNGAFETVERLKISNITYEKTTHAVYFKTWTGDQVGY
PPNGGGGGLGYASDIVATNLKTNNLKGAPFTISQCTTFSGASGNCTNSKFQIRDLVFINISGTTDSSEVASFQCS
AVAPCEDITIENTVCSKLATS*
Coding >Ani_SJS100_1|g8549.t1
ATGGCACCTATAGCGTTGAAAATCCTCCTTTTTACCTCTCTCATTGTCCCTTCCATCTCCCTATCGGACCAAGCG
AGGAATGGTCATGCAAGAACAATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTT
ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTAC
TGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTC
TTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAAT
TACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAG
AGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTAT
GATGACGGCGATTCAGCACAGAACACCGACGGCGCAAATACTATCTACAGCAACAACATCACATTCACGAACTGG
GAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTC
ACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAG
ATCTCGAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATAT
CCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTC
AAAGGTGCTCCATTTACAATCTCTCAGTGCACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTT
CAGATTCGCGATCTTGTCTTCATCAATATCTCTGGAACGACAGACTCCTCAGAAGTTGCGAGCTTTCAGTGTAGT
GCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATACAGTCTGCTCCAAGCTAGCTACCTCATAA
Transcript >Ani_SJS100_1|g8549.t1
ATGGCACCTATAGCGTTGAAAATCCTCCTTTTTACCTCTCTCATTGTCCCTTCCATCTCCCTATCGGACCAAGCG
AGGAATGGTCATGCAAGAACAATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTT
ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTAC
TGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTC
TTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAAT
TACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAG
AGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTAT
GATGACGGCGATTCAGCACAGAACACCGACGGCGCAAATACTATCTACAGCAACAACATCACATTCACGAACTGG
GAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTC
ACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAG
ATCTCGAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATAT
CCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTC
AAAGGTGCTCCATTTACAATCTCTCAGTGCACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTT
CAGATTCGCGATCTTGTCTTCATCAATATCTCTGGAACGACAGACTCCTCAGAAGTTGCGAGCTTTCAGTGTAGT
GCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATACAGTCTGCTCCAAGCTAGCTACCTCATAA
Gene >Ani_SJS100_1|g8549.t1
ATGGCACCTATAGCGTTGAAAATCCTCCTTTTTACCTCTCTCATTGTCCCTTCCATCTCCCTATCGGACCAAGCG
AGGAATGGTCATGCAAGAACAATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTT
ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGGTAAATAAATTACCTTTGTAT
GTAATGTTAGTTTCTTGTTTGTTTCTGACAATGGACAGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCC
TCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGAT
ACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGCGACCGA
ACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGTAGG
TATCGTTATTCATTTTGCGCCATCTTGCTAAATGAATGCATGTTGCTAACAATACAGGACAATGTCTATCATTCA
CACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACGTTAGTACCA
TTCCGCATGTTGAATCGGGACGCAAGTCACGCCTCTGACCCTAGTTAAATAGAGAACACCGACGGCGCAAATACT
ATCTACAGCAACAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAAT
TCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATAT
AATGGTGCTTTTGAGACTGTTGAACGCCTTAAGATCTCGAACATCACATATGAGAAGACAACTCATGCCGTGTAC
TTCAAGACCTGGACGGGTGACCAGGTCGGATATCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGTACGTCCACG
TAATTTTATCCAAGTCCTTTGTTGATTTTAACCATACTACCATGGCAGATGCATCCGACATCGTCGCAACCAACT
TGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGCACGACGTTCTCTGGTGCTTCAGGGAACT
GCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCATCAATATCTCTGGAACGACAGACTCCTCAGAAGTTG
CGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGGGGA
ATACGACCCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGT
GTGTTGGATCAAGTGCTACTGGGGGATGTTAGCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAAGTTCTCCGGT
AGCATAATTACTGAACAGCTTGATTAAGCATTAAGTTGTGTATGTCCAGCTACTGATGTGATTGATTTGAATTTC
AGCAAACCTGTTTGGTTGCCAACGTAGTTATAGTAACTACGATGTTGATGTTGATGGGCATGTACCGATTGCTGA
TTCTGAACGCCTCCAATATAATAACAAAACATACAAGCCCATTATTCTTTTAGCTATAGAAGACTTCAGTTCTAT
ACCAGACCAGGACCAGCCCTTTGGTAAGCACCATAACTCCAGCTCAGGGTAATATAGTTGTGTATAGAATATGCA
GTTAGGGCCCGTGGGAGTGCTAATGTTGGGCTGGTGTCAATGCGAAATAAAAAAGAAAGGATAACATAATATTCT
TTCTATCAGCGTGGAAGGATTGGATCAATGCTCTTCTTGTCCGTTTGTGGGTGGACTGTTGCATGCTCCTTTAAC
GGCTATCACGGTCATCCTGATCGCCAGTGTCCCCAAGGACAACCTACACATAAAGCTGCTGCTAATAGACGTGAA
AGCAAAGCACCTTGTTAAGGACTGCTCAACGGCCAACAGAACGTGGAATATATAGCACAGAGCTGCTATGTATGA
GGCTAAGTTGAATATTGCAGACAGTCTGCTCCAAGCTAGCTACCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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