Protein ID | Ani_SJS100_1|g8505.t1 |
Gene name | |
Location | scaffold_068:3879..6411 |
Strand | + |
Gene length (bp) | 2532 |
Transcript length (bp) | 2532 |
Coding sequence length (bp) | 2532 |
Protein length (aa) | 844 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02386 | TrkH | Cation transport protein | 2.1E-149 | 384 | 775 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0006812 | cation transport | Yes |
GO:0008324 | cation transmembrane transporter activity | Yes |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0009987 | cellular process | No |
GO:0005215 | transporter activity | No |
GO:0006811 | ion transport | No |
GO:0006810 | transport | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 31 | 53 | 22 |
2 | 86 | 108 | 22 |
3 | 422 | 444 | 22 |
4 | 494 | 516 | 22 |
5 | 551 | 573 | 22 |
6 | 613 | 635 | 22 |
7 | 675 | 692 | 17 |
8 | 707 | 729 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8505.t1 MFSAVLRRATSVTSRFTSHIPWLKNLRMNFVLIHYVYIIATSLLSSIIIYPGANLDYTDALFLSAGAATQSGLNT VDLNTLHTYQQIVLYVVSMLTTPIFIHTVLVFVRLYWFEKRFQHVVSDARALRHTRSRLRTISEDKDGQSSSREE AGVAGRSIVVLRDTLGHPGSRQQAKEKSGEDSPPASPTARDPPENLGEDASNALNQKLGIGLGNSLGNLRVPAQL SPEHHIAFLENQRRNKGALRIPSPREYDNGGAPQVLEEEEEEELNRPVRTSSNSSSSERSPCDISKEDENDKDED DEDDDKDEDRPRRLDGPHITINEPDMIRTRTRNSTFPRLDTRPTFRETKNDTDASQLGRLTSRRPTLHNLFRTLT QERERSTQPYLSWNATVGRNSNFVDLTEEQRDELGGIEYRALKTLAVVLISYYAFFHILGILCLVPWIMTTHWGK VVEEIGQGRPWWAIFMAQSAFNDVGFTLTPDSLSSFQRAIFPLLLMTFLIIIGNTGFPCMLRLIIWVLSKVTRAE TPLWEELRFLLDHPRRCFTLLFPRNATWWLFAILVALNGIDLIFFIILDLNDSAVTSLPTGIRIVDGLFQAACTR TAGLAVISVSDLHPAVQVSYLIMMYISVFPIAISLRRTNVYEEKSLGIYASTEDDESDENQTPPSYIGAHLRKQL SFDLWYVFLGLFIITIVEGKRLQQQDEYSFQVWSVLFEVVSAYGTVGLSLGYPGVNASFSSQFQVLSKLVIIAMQ IRGRHRGLPYALDRAILLPSESLNQNEIADAERRMRRRTSSLSQMSMDRQQSQGRPEHGASTSLDPKDRASQTWN NGDIIRRQSTIRSQRSQR* |
Coding | >Ani_SJS100_1|g8505.t1 ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCACCTCCCACATTCCATGGCTAAAGAAC CTGCGCATGAATTTTGTGCTCATCCACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGCCGCCACCCAGAGCGGTCTCAACACC GTCGACCTCAATACCTTGCATACCTACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATTTCAGCATGTCGTCAGCGATGCGCGC GCCCTTCGCCATACTCGCTCTCGCCTCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCATCCGGGAAGCCGGCAGCAGGCCAAG GAGAAATCTGGCGAGGACTCACCCCCCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGGAAACCTTCGTGTTCCGGCTCAGCTG AGCCCAGAACATCATATTGCATTCCTGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGAGGAGTTAAATCGACCCGTTCGCACA TCTAGCAATTCTTCGAGTTCCGAGCGCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCCCCATATTACGATTAACGAGCCGGAT ATGATCCGGACAAGGACGCGGAACTCTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCTACACAATCTTTTCCGCACCCTTACG CAGGAACGTGAACGGTCAACACAGCCGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATTGAAGACTCTGGCAGTAGTCCTAATT TCCTACTATGCCTTCTTCCACATTCTGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGCTCAATCAGCTTTTAACGATGTCGGT TTCACTCTCACGCCAGACTCGCTATCTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGTTCTGTCCAAAGTGACTCGTGCCGAA ACCCCGCTGTGGGAGGAACTCCGCTTTCTGCTGGATCATCCACGTCGATGCTTCACTCTACTCTTTCCGAGGAAT GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTTGATATTTTTCATTATTCTGGACTTG AATGATTCGGCCGTCACATCCCTGCCCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCAGGTGTCCTACTTGATCATGATGTAT ATATCCGTCTTTCCCATCGCCATTTCTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATATCGGAGCGCATTTGCGGAAGCAACTC AGTTTTGATCTATGGTACGTGTTCCTGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGCGTACGGCACTGTTGGTCTGTCGCTC GGGTATCCCGGAGTCAATGCCTCCTTCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCTGCTCCCTTCGGAATCTCTGAATCAG AACGAGATCGCAGACGCAGAACGGCGTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG CAATCTCAGGGTCGACCGGAGCACGGGGCTTCTACGAGTCTCGATCCAAAGGACCGGGCAAGCCAGACATGGAAC AATGGCGACATCATCCGTCGTCAGTCGACGATACGGTCACAGCGCTCGCAGCGCTGA |
Transcript | >Ani_SJS100_1|g8505.t1 ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCACCTCCCACATTCCATGGCTAAAGAAC CTGCGCATGAATTTTGTGCTCATCCACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGCCGCCACCCAGAGCGGTCTCAACACC GTCGACCTCAATACCTTGCATACCTACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATTTCAGCATGTCGTCAGCGATGCGCGC GCCCTTCGCCATACTCGCTCTCGCCTCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCATCCGGGAAGCCGGCAGCAGGCCAAG GAGAAATCTGGCGAGGACTCACCCCCCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGGAAACCTTCGTGTTCCGGCTCAGCTG AGCCCAGAACATCATATTGCATTCCTGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGAGGAGTTAAATCGACCCGTTCGCACA TCTAGCAATTCTTCGAGTTCCGAGCGCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCCCCATATTACGATTAACGAGCCGGAT ATGATCCGGACAAGGACGCGGAACTCTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCTACACAATCTTTTCCGCACCCTTACG CAGGAACGTGAACGGTCAACACAGCCGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATTGAAGACTCTGGCAGTAGTCCTAATT TCCTACTATGCCTTCTTCCACATTCTGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGCTCAATCAGCTTTTAACGATGTCGGT TTCACTCTCACGCCAGACTCGCTATCTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGTTCTGTCCAAAGTGACTCGTGCCGAA ACCCCGCTGTGGGAGGAACTCCGCTTTCTGCTGGATCATCCACGTCGATGCTTCACTCTACTCTTTCCGAGGAAT GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTTGATATTTTTCATTATTCTGGACTTG AATGATTCGGCCGTCACATCCCTGCCCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCAGGTGTCCTACTTGATCATGATGTAT ATATCCGTCTTTCCCATCGCCATTTCTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATATCGGAGCGCATTTGCGGAAGCAACTC AGTTTTGATCTATGGTACGTGTTCCTGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGCGTACGGCACTGTTGGTCTGTCGCTC GGGTATCCCGGAGTCAATGCCTCCTTCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCTGCTCCCTTCGGAATCTCTGAATCAG AACGAGATCGCAGACGCAGAACGGCGTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG CAATCTCAGGGTCGACCGGAGCACGGGGCTTCTACGAGTCTCGATCCAAAGGACCGGGCAAGCCAGACATGGAAC AATGGCGACATCATCCGTCGTCAGTCGACGATACGGTCACAGCGCTCGCAGCGCTGA |
Gene | >Ani_SJS100_1|g8505.t1 ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCACCTCCCACATTCCATGGCTAAAGAAC CTGCGCATGAATTTTGTGCTCATCCACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGCCGCCACCCAGAGCGGTCTCAACACC GTCGACCTCAATACCTTGCATACCTACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATTTCAGCATGTCGTCAGCGATGCGCGC GCCCTTCGCCATACTCGCTCTCGCCTCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCATCCGGGAAGCCGGCAGCAGGCCAAG GAGAAATCTGGCGAGGACTCACCCCCCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGGAAACCTTCGTGTTCCGGCTCAGCTG AGCCCAGAACATCATATTGCATTCCTGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGAGGAGTTAAATCGACCCGTTCGCACA TCTAGCAATTCTTCGAGTTCCGAGCGCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCCCCATATTACGATTAACGAGCCGGAT ATGATCCGGACAAGGACGCGGAACTCTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCTACACAATCTTTTCCGCACCCTTACG CAGGAACGTGAACGGTCAACACAGCCGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATTGAAGACTCTGGCAGTAGTCCTAATT TCCTACTATGCCTTCTTCCACATTCTGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGCTCAATCAGCTTTTAACGATGTCGGT TTCACTCTCACGCCAGACTCGCTATCTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGTTCTGTCCAAAGTGACTCGTGCCGAA ACCCCGCTGTGGGAGGAACTCCGCTTTCTGCTGGATCATCCACGTCGATGCTTCACTCTACTCTTTCCGAGGAAT GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTTGATATTTTTCATTATTCTGGACTTG AATGATTCGGCCGTCACATCCCTGCCCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCAGGTGTCCTACTTGATCATGATGTAT ATATCCGTCTTTCCCATCGCCATTTCTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATATCGGAGCGCATTTGCGGAAGCAACTC AGTTTTGATCTATGGTACGTGTTCCTGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGCGTACGGCACTGTTGGTCTGTCGCTC GGGTATCCCGGAGTCAATGCCTCCTTCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCTGCTCCCTTCGGAATCTCTGAATCAG AACGAGATCGCAGACGCAGAACGGCGTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG CAATCTCAGGGTCGACCGGAGCACGGGGCTTCTACGAGTCTCGATCCAAAGGACCGGGCAAGCCAGACATGGAAC AATGGCGACATCATCCGTCGTCAGTCGACGATACGGTCACAGCGCTCGCAGCGCTGA |