Protein ID | Ani_SJS100_1|g8504.t1 |
Gene name | |
Location | scaffold_068:833..2474 |
Strand | + |
Gene length (bp) | 1641 |
Transcript length (bp) | 1641 |
Coding sequence length (bp) | 1641 |
Protein length (aa) | 547 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13921 | Myb_DNA-bind_6 | Myb-like DNA-binding domain | 1.7E-13 | 267 | 325 |
PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 6.9E-11 | 267 | 308 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 63 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8504.t1 MSNSSPQYASQKRNNAPEDFEDSQTGLEIPSTPSTPIKGVKQELQANGSKSRRKRRALDNATNNAALTLSQPSQH STPMDHPPKRKKVRESMESQIQSRKTDVAKENLDNVLLENASSASLALEPENKDKEGGSAQEELEANLTTASKQS IEKYKGLVDFKKGKRGLDANKGKGDRSGFFTPEEVKGLESFKLDFCTTHGMSSDTFDLMVQHSERDKSNPFPCPT EITTKPAFWKKVYEIIPGRNKRSVYRFMRRHFQCTTQKPHYWTAEQDDELILLHERHGPKWAHIAKMIGRSDDDV IQRWRNHLEHRQTMNRGPWSEWEVSALLEHLQAWWTHMKKLGHDVGRDIYEIDESKISWGNISNSMDNCRSRQQC GDKFRKIRRKVLTRRSMGNPDAFYDPVVEAKPPKRRGKSRSITSSQSQSNKHFKSSEYVESDDESGEEETETDNT SSMDQSTSKFDDNSSSSSKSLKSAPKNVNHSVHSLEDSDRSDPDISISGSEDSNSESNPGKSGSDNDTGSLRSVQ PSGKKQSSGHKDTGSHKRQRR* |
Coding | >Ani_SJS100_1|g8504.t1 ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCCCGAGGATTTCGAGGACAGTCAAACG GGATTGGAAATACCTTCGACCCCTTCAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACTGACATTGTCTCAACCATCGCAGCAC AGTACACCAATGGATCATCCACCAAAGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATCTTCAGCTTCACTCGCTCTAGAACCA GAAAATAAGGACAAAGAGGGAGGGTCTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCTGGATGCCAACAAAGGGAAAGGAGAC AGATCTGGTTTCTTTACACCGGAGGAAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC ATGTCGAGCGACACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAAGTCAAACCCCTTCCCTTGTCCTACG GAAATCACCACAAAACCGGCTTTCTGGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTGGACTGCCGAACAAGATGACGAACTC ATCTTACTTCATGAACGCCACGGGCCCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGGGCCTTGGTCTGAATGGGAAGTATCT GCACTACTAGAGCATCTACAGGCCTGGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGACAACTGCCGTTCCAGGCAGCAGTGT GGAGACAAATTTCGCAAGATCAGGCGCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGATTACGTCTTCTCAGAGCCAATCAAAC AAGCACTTTAAAAGTTCTGAATACGTGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTCTTCGAAGTCGCTGAAATCTGCACCC AAGAACGTCAATCATTCAGTTCATTCCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGATACCGGTAGTCTTCGTTCGGTACAA CCGTCTGGCAAGAAGCAGTCTTCGGGACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA |
Transcript | >Ani_SJS100_1|g8504.t1 ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCCCGAGGATTTCGAGGACAGTCAAACG GGATTGGAAATACCTTCGACCCCTTCAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACTGACATTGTCTCAACCATCGCAGCAC AGTACACCAATGGATCATCCACCAAAGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATCTTCAGCTTCACTCGCTCTAGAACCA GAAAATAAGGACAAAGAGGGAGGGTCTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCTGGATGCCAACAAAGGGAAAGGAGAC AGATCTGGTTTCTTTACACCGGAGGAAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC ATGTCGAGCGACACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAAGTCAAACCCCTTCCCTTGTCCTACG GAAATCACCACAAAACCGGCTTTCTGGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTGGACTGCCGAACAAGATGACGAACTC ATCTTACTTCATGAACGCCACGGGCCCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGGGCCTTGGTCTGAATGGGAAGTATCT GCACTACTAGAGCATCTACAGGCCTGGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGACAACTGCCGTTCCAGGCAGCAGTGT GGAGACAAATTTCGCAAGATCAGGCGCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGATTACGTCTTCTCAGAGCCAATCAAAC AAGCACTTTAAAAGTTCTGAATACGTGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTCTTCGAAGTCGCTGAAATCTGCACCC AAGAACGTCAATCATTCAGTTCATTCCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGATACCGGTAGTCTTCGTTCGGTACAA CCGTCTGGCAAGAAGCAGTCTTCGGGACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA |
Gene | >Ani_SJS100_1|g8504.t1 ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCCCGAGGATTTCGAGGACAGTCAAACG GGATTGGAAATACCTTCGACCCCTTCAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACTGACATTGTCTCAACCATCGCAGCAC AGTACACCAATGGATCATCCACCAAAGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATCTTCAGCTTCACTCGCTCTAGAACCA GAAAATAAGGACAAAGAGGGAGGGTCTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCTGGATGCCAACAAAGGGAAAGGAGAC AGATCTGGTTTCTTTACACCGGAGGAAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC ATGTCGAGCGACACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAAGTCAAACCCCTTCCCTTGTCCTACG GAAATCACCACAAAACCGGCTTTCTGGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTGGACTGCCGAACAAGATGACGAACTC ATCTTACTTCATGAACGCCACGGGCCCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGGGCCTTGGTCTGAATGGGAAGTATCT GCACTACTAGAGCATCTACAGGCCTGGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGACAACTGCCGTTCCAGGCAGCAGTGT GGAGACAAATTTCGCAAGATCAGGCGCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGATTACGTCTTCTCAGAGCCAATCAAAC AAGCACTTTAAAAGTTCTGAATACGTGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTCTTCGAAGTCGCTGAAATCTGCACCC AAGAACGTCAATCATTCAGTTCATTCCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGATACCGGTAGTCTTCGTTCGGTACAA CCGTCTGGCAAGAAGCAGTCTTCGGGACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA |