Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8426.t1
Gene name
Locationscaffold_066:136797..137572
Strand+
Gene length (bp)775
Transcript length (bp)714
Coding sequence length (bp)714
Protein length (aa) 238

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13577 SnoaL_4 SnoaL-like domain 3.0E-11 25 147

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8426.t1
MVYNITEKETQPTIWSHINGSEGDILDRYCVSELCKGWPVYRDASEWNHYRHLFVDKGAFVFTTWSGGLSIDDFI
KTSIKGRANGDHIMHRENGTLVDLNPTTSRAIGKMKATITQRFNWDGVEFDVECDCRFINFCLKQGGDWKVVYIK
LFYEKDRVTPADGQTVPKFDRAELEKYPKGYQYLAVAQAKLGHPILNDLPTMNNKAFYKLYEAMDAWMEARPVGD
LLEIPKEASPRY*
Coding >Ani_SJS100_1|g8426.t1
ATGGTTTACAATATCACCGAAAAGGAAACCCAGCCCACCATCTGGAGCCACATCAACGGCTCCGAGGGCGATATC
CTCGATCGCTACTGCGTCTCCGAGCTCTGCAAGGGCTGGCCAGTCTATCGCGATGCCTCTGAATGGAACCACTAC
CGCCATCTGTTTGTCGACAAGGGCGCTTTTGTCTTTACTACCTGGAGCGGCGGACTTTCTATAGACGATTTCATC
AAGACGTCCATTAAGGGACGCGCCAACGGAGACCACATCATGCACCGCGAAAACGGCACCCTCGTCGACCTGAAT
CCGACCACCAGCCGCGCCATCGGTAAAATGAAGGCCACCATCACTCAACGCTTCAACTGGGACGGAGTCGAGTTC
GACGTGGAGTGCGATTGCCGCTTCATAAACTTCTGTCTGAAACAGGGAGGTGATTGGAAAGTGGTATATATCAAA
TTGTTCTACGAAAAGGATCGCGTCACACCTGCAGATGGTCAGACGGTGCCCAAATTTGACCGAGCGGAGTTGGAG
AAATACCCCAAGGGTTACCAGTATCTGGCGGTGGCACAGGCCAAGCTAGGCCACCCGATCTTGAATGATTTGCCG
ACGATGAACAATAAGGCGTTCTACAAATTGTACGAGGCGATGGATGCGTGGATGGAGGCCCGACCGGTAGGAGAT
CTACTGGAGATTCCCAAGGAAGCGTCGCCACGGTATTGA
Transcript >Ani_SJS100_1|g8426.t1
ATGGTTTACAATATCACCGAAAAGGAAACCCAGCCCACCATCTGGAGCCACATCAACGGCTCCGAGGGCGATATC
CTCGATCGCTACTGCGTCTCCGAGCTCTGCAAGGGCTGGCCAGTCTATCGCGATGCCTCTGAATGGAACCACTAC
CGCCATCTGTTTGTCGACAAGGGCGCTTTTGTCTTTACTACCTGGAGCGGCGGACTTTCTATAGACGATTTCATC
AAGACGTCCATTAAGGGACGCGCCAACGGAGACCACATCATGCACCGCGAAAACGGCACCCTCGTCGACCTGAAT
CCGACCACCAGCCGCGCCATCGGTAAAATGAAGGCCACCATCACTCAACGCTTCAACTGGGACGGAGTCGAGTTC
GACGTGGAGTGCGATTGCCGCTTCATAAACTTCTGTCTGAAACAGGGAGGTGATTGGAAAGTGGTATATATCAAA
TTGTTCTACGAAAAGGATCGCGTCACACCTGCAGATGGTCAGACGGTGCCCAAATTTGACCGAGCGGAGTTGGAG
AAATACCCCAAGGGTTACCAGTATCTGGCGGTGGCACAGGCCAAGCTAGGCCACCCGATCTTGAATGATTTGCCG
ACGATGAACAATAAGGCGTTCTACAAATTGTACGAGGCGATGGATGCGTGGATGGAGGCCCGACCGGTAGGAGAT
CTACTGGAGATTCCCAAGGAAGCGTCGCCACGGTATTGA
Gene >Ani_SJS100_1|g8426.t1
ATGGTTTACAATATCACCGAAAAGGAAACCCAGCCCACCATCTGGAGCCACATCAACGGCTCCGAGGGCGATATC
CTCGATCGCTACTGCGTCTCCGAGCTCTGCAAGGGCTGGCCAGTCTATCGCGATGCCTCTGAATGGAACCACTAC
CGCCATCTGTTTGTCGACAAGGGCGCTTTTGTCTTTACTAGTAGGTCGAGTCTCTAATTCCGGGACAGCCAGTCC
AGCTTACATGTCATGTCTGTTTCCAGCCTGGAGCGGCGGACTTTCTATAGACGATTTCATCAAGACGTCCATTAA
GGGACGCGCCAACGGAGACCACATCATGCACCGCGAAAACGGCACCCTCGTCGACCTGAATCCGACCACCAGCCG
CGCCATCGGTAAAATGAAGGCCACCATCACTCAACGCTTCAACTGGGACGGAGTCGAGTTCGACGTGGAGTGCGA
TTGCCGCTTCATAAACTTCTGTCTGAAACAGGGAGGTGATTGGAAAGTGGTATATATCAAATTGTTCTACGAAAA
GGATCGCGTCACACCTGCAGATGGTCAGACGGTGCCCAAATTTGACCGAGCGGAGTTGGAGAAATACCCCAAGGG
TTACCAGTATCTGGCGGTGGCACAGGCCAAGCTAGGCCACCCGATCTTGAATGATTTGCCGACGATGAACAATAA
GGCGTTCTACAAATTGTACGAGGCGATGGATGCGTGGATGGAGGCCCGACCGGTAGGAGATCTACTGGAGATTCC
CAAGGAAGCGTCGCCACGGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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