Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8405.t1
Gene name
Locationscaffold_066:77670..78607
Strand+
Gene length (bp)937
Transcript length (bp)846
Coding sequence length (bp)846
Protein length (aa) 282

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.5E-56 15 273
PF00106 adh_short short chain dehydrogenase 3.2E-43 10 221
PF08659 KR KR domain 1.5E-10 9 137
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.6E-04 11 136
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 2.6E-04 12 99

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8405.t1
MAGTRLNGGIALVTGAASGIGKDTCFALAEAGVEAILLADLNLPTETTLQECQKFASHPKFRALSVVVDVTDEAS
VDNMVQRAVSELGRIDYCVHSAGISGNSRTRTATLNVDAFDQSMRTNSRGTMLVLRAVSQAMSLQEPRSYTSTRS
NTTRSLGRGSIVVLSSINGLISVPGMMPYTASKHATIGIAQTAAVDNFEHHIRVNIVCPSWTDTPMMQKTISNVP
TLEQAIAKLCPLGRIAMPEEVSDAVVFLCSPAASFINGESLVIDAGFTLTGFRMGH*
Coding >Ani_SJS100_1|g8405.t1
ATGGCGGGTACCAGACTGAACGGTGGAATCGCCCTTGTGACTGGTGCCGCATCAGGCATTGGGAAAGATACCTGC
TTCGCTCTCGCCGAAGCCGGCGTCGAAGCAATCCTCCTGGCGGACCTGAACCTACCTACAGAAACCACTCTCCAG
GAGTGTCAAAAGTTCGCCTCCCACCCCAAATTCCGTGCCCTGTCGGTAGTGGTAGACGTCACCGATGAGGCCAGC
GTCGACAATATGGTCCAGCGCGCCGTGAGCGAGCTCGGGCGTATTGACTACTGCGTGCACTCCGCCGGCATCTCT
GGGAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTCGACCAATCCATGAGAACCAACTCCCGCGGG
ACTATGCTGGTGCTGCGGGCCGTCTCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGCGCAGT
AACACGACCCGCAGTCTGGGCCGCGGGTCCATCGTCGTGCTGTCTTCGATCAATGGCCTGATCTCAGTGCCCGGA
ATGATGCCGTATACGGCATCCAAGCACGCGACCATCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTGAGCAT
CACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCCATGATGCAGAAGACAATCAGCAACGTCCCT
ACCCTGGAGCAGGCCATTGCGAAACTGTGTCCTCTCGGGAGGATCGCCATGCCAGAGGAGGTATCTGATGCGGTC
GTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGTCTGGTGATTGATGCAGGCTTCACTTTGACG
GGGTTCCGGATGGGCCACTAA
Transcript >Ani_SJS100_1|g8405.t1
ATGGCGGGTACCAGACTGAACGGTGGAATCGCCCTTGTGACTGGTGCCGCATCAGGCATTGGGAAAGATACCTGC
TTCGCTCTCGCCGAAGCCGGCGTCGAAGCAATCCTCCTGGCGGACCTGAACCTACCTACAGAAACCACTCTCCAG
GAGTGTCAAAAGTTCGCCTCCCACCCCAAATTCCGTGCCCTGTCGGTAGTGGTAGACGTCACCGATGAGGCCAGC
GTCGACAATATGGTCCAGCGCGCCGTGAGCGAGCTCGGGCGTATTGACTACTGCGTGCACTCCGCCGGCATCTCT
GGGAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTCGACCAATCCATGAGAACCAACTCCCGCGGG
ACTATGCTGGTGCTGCGGGCCGTCTCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGCGCAGT
AACACGACCCGCAGTCTGGGCCGCGGGTCCATCGTCGTGCTGTCTTCGATCAATGGCCTGATCTCAGTGCCCGGA
ATGATGCCGTATACGGCATCCAAGCACGCGACCATCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTGAGCAT
CACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCCATGATGCAGAAGACAATCAGCAACGTCCCT
ACCCTGGAGCAGGCCATTGCGAAACTGTGTCCTCTCGGGAGGATCGCCATGCCAGAGGAGGTATCTGATGCGGTC
GTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGTCTGGTGATTGATGCAGGCTTCACTTTGACG
GGGTTCCGGATGGGCCACTAA
Gene >Ani_SJS100_1|g8405.t1
ATGGCGGGTACCAGACTGAACGGTGGAATCGCCCTTGTGACTGGTGTAAGTCGGTTGTCGCTGTTTTGCTTCCAT
CGTATCGAGAACCCACAAAAGCGAAGATTAAATCAAATGTGACTGAGAACTCAATCTGCAGGCCGCATCAGGCAT
TGGGAAAGATACCTGCTTCGCTCTCGCCGAAGCCGGCGTCGAAGCAATCCTCCTGGCGGACCTGAACCTACCTAC
AGAAACCACTCTCCAGGAGTGTCAAAAGTTCGCCTCCCACCCCAAATTCCGTGCCCTGTCGGTAGTGGTAGACGT
CACCGATGAGGCCAGCGTCGACAATATGGTCCAGCGCGCCGTGAGCGAGCTCGGGCGTATTGACTACTGCGTGCA
CTCCGCCGGCATCTCTGGGAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTCGACCAATCCATGAG
AACCAACTCCCGCGGGACTATGCTGGTGCTGCGGGCCGTCTCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTA
CACCAGCACGCGCAGTAACACGACCCGCAGTCTGGGCCGCGGGTCCATCGTCGTGCTGTCTTCGATCAATGGCCT
GATCTCAGTGCCCGGAATGATGCCGTATACGGCATCCAAGCACGCGACCATCGGGATCGCCCAAACTGCCGCCGT
CGACAACTTTGAGCATCACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCCATGATGCAGAAGAC
AATCAGCAACGTCCCTACCCTGGAGCAGGCCATTGCGAAACTGTGTCCTCTCGGGAGGATCGCCATGCCAGAGGA
GGTATCTGATGCGGTCGTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGTCTGGTGATTGATGC
AGGCTTCACTTTGACGGGGTTCCGGATGGGCCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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