© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8400.t1 |
| Gene name | |
| Location | scaffold_066:60222..61556 |
| Strand | - |
| Gene length (bp) | 1334 |
| Transcript length (bp) | 1098 |
| Coding sequence length (bp) | 1098 |
| Protein length (aa) | 366 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01408 | GFO_IDH_MocA | Oxidoreductase family, NAD-binding Rossmann fold | 4.0E-17 | 7 | 121 |
| PF02894 | GFO_IDH_MocA_C | Oxidoreductase family, C-terminal alpha/beta domain | 3.8E-14 | 141 | 348 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000166 | nucleotide binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8400.t1 MTTQPRLKIALIGLGRLGAIRARILAFQQPRIELVAACDTKPGADEWAAANLPSSVKFFDDPENCMKSSGAEAVL ISTATATHAPLILKALDLGLHVMCEKPISVDVITTEEVVAKAASKPHLKFLVPFCRRYDDSYRQAKQMVMDGLLG DIHAVESSCIDQQDPTGFFVKFSEQSGGIFVDMGVHDIDIGRYYLDVKSGLTNPKKQVKRVIAMGQQAVYGELAK YGDCDNGWGLVEFANGKILTFHLGRTLTNGFEGMTRVCGTKAHSVINANSTVNRVEIRDSHGVRTATTPDAFILY DKSFIKDLEEFAAAVLDGEPLTCAPEDAYEAAKIATALQHSFRNGVPVYFDDNGLPIMEVAKDKA* |
| Coding | >Ani_SJS100_1|g8400.t1 ATGACCACCCAACCTCGCTTGAAAATCGCCCTGATCGGCCTGGGCCGTTTAGGTGCCATTCGTGCTCGGATTCTG GCTTTCCAGCAACCTCGCATTGAGCTTGTCGCTGCCTGCGACACAAAACCGGGGGCGGATGAGTGGGCGGCGGCA AACCTGCCTTCATCTGTGAAGTTTTTCGATGATCCGGAGAATTGCATGAAAAGTAGTGGCGCCGAGGCTGTCTTG ATCTCGACGGCCACAGCTACTCATGCCCCCTTGATCCTCAAAGCACTTGATTTAGGTCTGCATGTGATGTGTGAG AAACCCATCTCGGTAGATGTCATCACTACTGAGGAGGTCGTCGCTAAAGCCGCTTCTAAGCCTCACCTCAAATTC TTGGTACCCTTCTGTCGACGGTACGATGATTCGTATCGTCAGGCGAAACAGATGGTCATGGATGGGTTACTCGGT GATATACACGCGGTCGAGAGCTCCTGCATTGACCAGCAGGATCCTACAGGCTTCTTTGTGAAATTCTCCGAGCAG TCTGGAGGTATTTTTGTTGATATGGGGGTCCATGATATCGACATTGGCAGATACTACCTGGATGTCAAGTCGGGC CTCACAAATCCCAAGAAACAGGTCAAGAGAGTCATTGCCATGGGCCAACAGGCTGTGTATGGCGAGCTTGCCAAG TATGGCGACTGCGACAACGGATGGGGTCTGGTTGAATTCGCCAACGGCAAGATCCTCACCTTCCACTTGGGCCGC ACTCTCACCAACGGCTTCGAGGGGATGACCCGCGTGTGCGGGACTAAGGCCCATTCGGTCATCAATGCCAATTCC ACTGTTAACCGTGTTGAGATTCGTGATTCGCATGGTGTGCGTACGGCTACAACCCCAGATGCTTTCATCCTCTAC GATAAATCGTTCATCAAAGACTTGGAAGAGTTTGCGGCCGCGGTCCTTGACGGCGAGCCTCTCACCTGCGCTCCT GAGGATGCCTATGAGGCGGCTAAGATTGCCACTGCTCTACAGCACTCGTTCCGCAATGGCGTACCAGTATACTTT GACGACAATGGCTTGCCCATCATGGAAGTTGCGAAGGACAAGGCCTAG |
| Transcript | >Ani_SJS100_1|g8400.t1 ATGACCACCCAACCTCGCTTGAAAATCGCCCTGATCGGCCTGGGCCGTTTAGGTGCCATTCGTGCTCGGATTCTG GCTTTCCAGCAACCTCGCATTGAGCTTGTCGCTGCCTGCGACACAAAACCGGGGGCGGATGAGTGGGCGGCGGCA AACCTGCCTTCATCTGTGAAGTTTTTCGATGATCCGGAGAATTGCATGAAAAGTAGTGGCGCCGAGGCTGTCTTG ATCTCGACGGCCACAGCTACTCATGCCCCCTTGATCCTCAAAGCACTTGATTTAGGTCTGCATGTGATGTGTGAG AAACCCATCTCGGTAGATGTCATCACTACTGAGGAGGTCGTCGCTAAAGCCGCTTCTAAGCCTCACCTCAAATTC TTGGTACCCTTCTGTCGACGGTACGATGATTCGTATCGTCAGGCGAAACAGATGGTCATGGATGGGTTACTCGGT GATATACACGCGGTCGAGAGCTCCTGCATTGACCAGCAGGATCCTACAGGCTTCTTTGTGAAATTCTCCGAGCAG TCTGGAGGTATTTTTGTTGATATGGGGGTCCATGATATCGACATTGGCAGATACTACCTGGATGTCAAGTCGGGC CTCACAAATCCCAAGAAACAGGTCAAGAGAGTCATTGCCATGGGCCAACAGGCTGTGTATGGCGAGCTTGCCAAG TATGGCGACTGCGACAACGGATGGGGTCTGGTTGAATTCGCCAACGGCAAGATCCTCACCTTCCACTTGGGCCGC ACTCTCACCAACGGCTTCGAGGGGATGACCCGCGTGTGCGGGACTAAGGCCCATTCGGTCATCAATGCCAATTCC ACTGTTAACCGTGTTGAGATTCGTGATTCGCATGGTGTGCGTACGGCTACAACCCCAGATGCTTTCATCCTCTAC GATAAATCGTTCATCAAAGACTTGGAAGAGTTTGCGGCCGCGGTCCTTGACGGCGAGCCTCTCACCTGCGCTCCT GAGGATGCCTATGAGGCGGCTAAGATTGCCACTGCTCTACAGCACTCGTTCCGCAATGGCGTACCAGTATACTTT GACGACAATGGCTTGCCCATCATGGAAGTTGCGAAGGACAAGGCCTAG |
| Gene | >Ani_SJS100_1|g8400.t1 ATGACCACCCAACCTCGCTTGAAAATCGCCCTGATCGGCCTGGGCCGTTTAGGTGCCATTCGTGCTCGGATTCTG GCTTTCCAGCAACCTCGCATTGAGCTTGTCGCTGCCTGCGACACAAAACCGGGGGCGGATGAGTGGGCGGCGGCA AACCTGCCTTCATCTGTGAAGTTTTTCGATGATCCGGAGAATTGCATGAAAAGTAGTGGCGCCGAGGCTGTCTTG ATCTCGACGGCCACAGCTACTCATGCCCCCTTGATCCTCAAAGCACTTGATTTAGGTCTGGTGAGCTTACTAGCG ACTGCCTACATGTGGGGGTCAATGGCTAACCTGTGATCCAGCATGTGATGTGTGAGAAACCCATCTCGGTAGATG TCATCACTACTGAGGAGGTCGTCGCTAAAGCCGCTTCTAAGCCTCACCTCAAATTCTTGGTACCCTTCTGTCGAC GGTGTAAGTCGAGCATTTAATTTCCCGTGCTGAATCACGAAGACCTATCGACTAATCCAGAATAGACGATGATTC GTATCGTCAGGCGAAACAGATGGTCATGGATGGGTTACTCGGTGATATACACGCGGTCGAGAGCTCCTGCATTGA CCAGCAGGATCCTACAGGTGAGCTATCTTTCAAACAATTACCGCCAGCCTAGTGAGCTCTAACCGTCTTCCATAG GCTTCTTTGTGAAATTCTCCGAGCAGTCTGGAGGTATTTTTGTTGATATGGGGGTCCATGATGTCAGTCATATTT CCATTATTACTTAGTCTCTGTAGGGCTCAGTCGCTCACACCGCACAGATCGACATTGGCAGATACTACCTGGATG TCAAGTCGGGCCTCACAAATCCCAAGAAACAGGTCAAGAGAGTCATTGCCATGGGCCAACAGGCTGTGTATGGCG AGCTTGCCAAGTATGGCGACTGCGACAACGGATGGGGTCTGGTTGAATTCGCCAACGGCAAGATCCTCACCTTCC ACTTGGGCCGCACTCTCACCAACGGCTTCGAGGGGATGACCCGCGTGTGCGGGACTAAGGCCCATTCGGTCATCA ATGCCAATTCCACTGTTAACCGTGTTGAGATTCGTGATTCGCATGGTGTGCGTACGGCTACAACCCCAGATGCTT TCATCCTCTACGATAAATCGTTCATCAAAGACTTGGAAGAGTTTGCGGCCGCGGTCCTTGACGGCGAGCCTCTCA CCTGCGCTCCTGAGGATGCCTATGAGGCGGCTAAGATTGCCACTGCTCTACAGCACTCGTTCCGCAATGGCGTAC CAGTATACTTTGACGACAATGGCTTGCCCATCATGGAAGTTGCGAAGGACAAGGCCTAG |