Protein ID | Ani_SJS100_1|g8389.t1 |
Gene name | |
Location | scaffold_066:34085..35091 |
Strand | - |
Gene length (bp) | 1006 |
Transcript length (bp) | 945 |
Coding sequence length (bp) | 945 |
Protein length (aa) | 315 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04478 | Mid2 | Mid2 like cell wall stress sensor | 1.5E-06 | 226 | 282 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 255 | 277 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8389.t1 MEFLPVTVEGHGTLRALLQVQSSIGFQLATPDSVSVFEYLSFSAGIGGEVSASVADFLLQIDSSTSDDGHCDFEA VAEYTLAVGAAAGATVAVDTYQWGPTPNTTVPVFYTTLDSICAGSKTSSSTITPSATLEQRNDLVSTTVSTSTTY TLVDCASQGLINCPIYLQRTTSVKSTMTTVLTVKSGIDATYPASTFSSLTSVIPFGSDARRLVSTSGTPVSYIPP TATATSSSNPATDNDHRHHNHRSNNNKLIIGLSVGLGVPAVIAIASALWWFVYRRKQYSAVSQSDMTARPSELDR GAKEPQAIVAAAAG* |
Coding | >Ani_SJS100_1|g8389.t1 ATGGAATTTCTTCCAGTAACCGTTGAAGGCCATGGAACCCTTCGGGCCCTCCTACAAGTCCAAAGCAGTATCGGA TTTCAACTAGCAACCCCAGACTCGGTCTCCGTCTTCGAGTACCTGAGCTTTAGTGCAGGGATAGGCGGCGAAGTG TCTGCTTCTGTGGCTGACTTCCTCCTGCAGATCGATTCGTCTACTAGCGATGATGGTCACTGTGACTTTGAAGCT GTTGCAGAGTACACCCTCGCTGTGGGTGCTGCTGCGGGGGCAACCGTTGCTGTTGACACATACCAATGGGGGCCC ACGCCCAACACCACCGTCCCAGTGTTCTACACAACCCTGGATAGTATCTGCGCCGGTTCTAAGACATCTTCGTCT ACTATAACCCCATCTGCCACCCTTGAACAGCGGAACGACCTCGTTAGCACTACAGTGTCTACCTCGACGACGTAT ACGCTCGTTGACTGTGCATCACAAGGACTAATCAACTGCCCTATCTATCTCCAGCGGACGACATCAGTGAAGAGC ACCATGACAACAGTTCTCACAGTCAAATCCGGCATAGATGCCACATATCCCGCGAGCACCTTCTCGTCCTTGACC AGTGTCATCCCCTTTGGCAGTGATGCTCGCAGACTCGTATCCACATCCGGAACCCCGGTATCCTACATTCCCCCG ACTGCGACCGCAACAAGTAGTTCCAATCCCGCTACTGACAATGACCACCGCCACCACAACCACCGTTCGAATAAC AACAAGCTGATTATCGGCTTGAGTGTGGGGCTTGGTGTCCCGGCCGTCATAGCAATAGCATCTGCCCTATGGTGG TTTGTATATCGACGTAAACAATACTCAGCAGTATCGCAATCCGATATGACAGCTCGTCCGTCCGAACTGGATAGA GGTGCAAAAGAACCACAGGCAATAGTGGCTGCTGCTGCTGGTTGA |
Transcript | >Ani_SJS100_1|g8389.t1 ATGGAATTTCTTCCAGTAACCGTTGAAGGCCATGGAACCCTTCGGGCCCTCCTACAAGTCCAAAGCAGTATCGGA TTTCAACTAGCAACCCCAGACTCGGTCTCCGTCTTCGAGTACCTGAGCTTTAGTGCAGGGATAGGCGGCGAAGTG TCTGCTTCTGTGGCTGACTTCCTCCTGCAGATCGATTCGTCTACTAGCGATGATGGTCACTGTGACTTTGAAGCT GTTGCAGAGTACACCCTCGCTGTGGGTGCTGCTGCGGGGGCAACCGTTGCTGTTGACACATACCAATGGGGGCCC ACGCCCAACACCACCGTCCCAGTGTTCTACACAACCCTGGATAGTATCTGCGCCGGTTCTAAGACATCTTCGTCT ACTATAACCCCATCTGCCACCCTTGAACAGCGGAACGACCTCGTTAGCACTACAGTGTCTACCTCGACGACGTAT ACGCTCGTTGACTGTGCATCACAAGGACTAATCAACTGCCCTATCTATCTCCAGCGGACGACATCAGTGAAGAGC ACCATGACAACAGTTCTCACAGTCAAATCCGGCATAGATGCCACATATCCCGCGAGCACCTTCTCGTCCTTGACC AGTGTCATCCCCTTTGGCAGTGATGCTCGCAGACTCGTATCCACATCCGGAACCCCGGTATCCTACATTCCCCCG ACTGCGACCGCAACAAGTAGTTCCAATCCCGCTACTGACAATGACCACCGCCACCACAACCACCGTTCGAATAAC AACAAGCTGATTATCGGCTTGAGTGTGGGGCTTGGTGTCCCGGCCGTCATAGCAATAGCATCTGCCCTATGGTGG TTTGTATATCGACGTAAACAATACTCAGCAGTATCGCAATCCGATATGACAGCTCGTCCGTCCGAACTGGATAGA GGTGCAAAAGAACCACAGGCAATAGTGGCTGCTGCTGCTGGTTGA |
Gene | >Ani_SJS100_1|g8389.t1 ATGGAATTTCTTCCAGTAACCGTTGAAGGCCATGGAACCCTTCGGGCCCTCCTACAAGTCCAAAGCAGTATCGGA TTTCAACTAGCAACCCCAGACTCGGTCTCCGTCTTCGAGTACCTGAGCTTTAGTGCAGGGATAGGCGGCGAAGTG TCTGCTTCTGTGGCTGACTTCCTCCTGCAGATCGATTCGTCTACTAGCGATGATGGTCACTGTGACTTTGAAGCT GTTGCAGAGTACACCCTCGCTGTGGGTGCTGCTGCGGGGGCAACCGTTGCTGTTGACACATACCAATGGGGGCCC ACGCCCAACACCACCGTCCCAGTGTTCTACACAACCCTGGATAGTATCTGCGCCGGTTCTAAGACATCTTCGTCT ACTATAACCCCATCTGCCACCCTTGAACAGCGGAACGACCTCGTTAGCACTACAGTGTCTACCTCGACGACGTAT ACGCTCGTTGACTGTGCATCACAAGGACTAATCAACTGCCCTATCTATCTCCAGCGGACGACATCAGTGAAGAGC ACCATGACAACAGTTCTCACAGTCAAATCCGGCATAGATGCCACATATCCCGCGAGCACCTTCTCGTCCTTGACC AGTGTCATCCCCTTTGGCAGTGATGCTCGCAGACTCGTATCCACATCCGGAACCCCGGTATCCTACATTCCCCCG ACTGCGACCGCAACAAGTAGTTCCAATCCCGCTACTGACAATGACCACCGCCACCACAACCACCGTTCGAATAAC AACAAGCTGATTATCGGCTTGAGTGTGGGGCTTGGTGTCCCGGCCGTCATAGCAATAGCATCTGCCCTATGGTTG GTTTACCGCTTCCTAACCTTTCGCTTGACTCGGAGTTGAGGTAACTAACTAATGTAGGTGGTTTGTATATCGACG TAAACAATACTCAGCAGTATCGCAATCCGATATGACAGCTCGTCCGTCCGAACTGGATAGAGGTGCAAAAGAACC ACAGGCAATAGTGGCTGCTGCTGCTGGTTGA |