Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8389.t1
Gene name
Locationscaffold_066:34085..35091
Strand-
Gene length (bp)1006
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04478 Mid2 Mid2 like cell wall stress sensor 1.5E-06 226 282

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 255 277 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8389.t1
MEFLPVTVEGHGTLRALLQVQSSIGFQLATPDSVSVFEYLSFSAGIGGEVSASVADFLLQIDSSTSDDGHCDFEA
VAEYTLAVGAAAGATVAVDTYQWGPTPNTTVPVFYTTLDSICAGSKTSSSTITPSATLEQRNDLVSTTVSTSTTY
TLVDCASQGLINCPIYLQRTTSVKSTMTTVLTVKSGIDATYPASTFSSLTSVIPFGSDARRLVSTSGTPVSYIPP
TATATSSSNPATDNDHRHHNHRSNNNKLIIGLSVGLGVPAVIAIASALWWFVYRRKQYSAVSQSDMTARPSELDR
GAKEPQAIVAAAAG*
Coding >Ani_SJS100_1|g8389.t1
ATGGAATTTCTTCCAGTAACCGTTGAAGGCCATGGAACCCTTCGGGCCCTCCTACAAGTCCAAAGCAGTATCGGA
TTTCAACTAGCAACCCCAGACTCGGTCTCCGTCTTCGAGTACCTGAGCTTTAGTGCAGGGATAGGCGGCGAAGTG
TCTGCTTCTGTGGCTGACTTCCTCCTGCAGATCGATTCGTCTACTAGCGATGATGGTCACTGTGACTTTGAAGCT
GTTGCAGAGTACACCCTCGCTGTGGGTGCTGCTGCGGGGGCAACCGTTGCTGTTGACACATACCAATGGGGGCCC
ACGCCCAACACCACCGTCCCAGTGTTCTACACAACCCTGGATAGTATCTGCGCCGGTTCTAAGACATCTTCGTCT
ACTATAACCCCATCTGCCACCCTTGAACAGCGGAACGACCTCGTTAGCACTACAGTGTCTACCTCGACGACGTAT
ACGCTCGTTGACTGTGCATCACAAGGACTAATCAACTGCCCTATCTATCTCCAGCGGACGACATCAGTGAAGAGC
ACCATGACAACAGTTCTCACAGTCAAATCCGGCATAGATGCCACATATCCCGCGAGCACCTTCTCGTCCTTGACC
AGTGTCATCCCCTTTGGCAGTGATGCTCGCAGACTCGTATCCACATCCGGAACCCCGGTATCCTACATTCCCCCG
ACTGCGACCGCAACAAGTAGTTCCAATCCCGCTACTGACAATGACCACCGCCACCACAACCACCGTTCGAATAAC
AACAAGCTGATTATCGGCTTGAGTGTGGGGCTTGGTGTCCCGGCCGTCATAGCAATAGCATCTGCCCTATGGTGG
TTTGTATATCGACGTAAACAATACTCAGCAGTATCGCAATCCGATATGACAGCTCGTCCGTCCGAACTGGATAGA
GGTGCAAAAGAACCACAGGCAATAGTGGCTGCTGCTGCTGGTTGA
Transcript >Ani_SJS100_1|g8389.t1
ATGGAATTTCTTCCAGTAACCGTTGAAGGCCATGGAACCCTTCGGGCCCTCCTACAAGTCCAAAGCAGTATCGGA
TTTCAACTAGCAACCCCAGACTCGGTCTCCGTCTTCGAGTACCTGAGCTTTAGTGCAGGGATAGGCGGCGAAGTG
TCTGCTTCTGTGGCTGACTTCCTCCTGCAGATCGATTCGTCTACTAGCGATGATGGTCACTGTGACTTTGAAGCT
GTTGCAGAGTACACCCTCGCTGTGGGTGCTGCTGCGGGGGCAACCGTTGCTGTTGACACATACCAATGGGGGCCC
ACGCCCAACACCACCGTCCCAGTGTTCTACACAACCCTGGATAGTATCTGCGCCGGTTCTAAGACATCTTCGTCT
ACTATAACCCCATCTGCCACCCTTGAACAGCGGAACGACCTCGTTAGCACTACAGTGTCTACCTCGACGACGTAT
ACGCTCGTTGACTGTGCATCACAAGGACTAATCAACTGCCCTATCTATCTCCAGCGGACGACATCAGTGAAGAGC
ACCATGACAACAGTTCTCACAGTCAAATCCGGCATAGATGCCACATATCCCGCGAGCACCTTCTCGTCCTTGACC
AGTGTCATCCCCTTTGGCAGTGATGCTCGCAGACTCGTATCCACATCCGGAACCCCGGTATCCTACATTCCCCCG
ACTGCGACCGCAACAAGTAGTTCCAATCCCGCTACTGACAATGACCACCGCCACCACAACCACCGTTCGAATAAC
AACAAGCTGATTATCGGCTTGAGTGTGGGGCTTGGTGTCCCGGCCGTCATAGCAATAGCATCTGCCCTATGGTGG
TTTGTATATCGACGTAAACAATACTCAGCAGTATCGCAATCCGATATGACAGCTCGTCCGTCCGAACTGGATAGA
GGTGCAAAAGAACCACAGGCAATAGTGGCTGCTGCTGCTGGTTGA
Gene >Ani_SJS100_1|g8389.t1
ATGGAATTTCTTCCAGTAACCGTTGAAGGCCATGGAACCCTTCGGGCCCTCCTACAAGTCCAAAGCAGTATCGGA
TTTCAACTAGCAACCCCAGACTCGGTCTCCGTCTTCGAGTACCTGAGCTTTAGTGCAGGGATAGGCGGCGAAGTG
TCTGCTTCTGTGGCTGACTTCCTCCTGCAGATCGATTCGTCTACTAGCGATGATGGTCACTGTGACTTTGAAGCT
GTTGCAGAGTACACCCTCGCTGTGGGTGCTGCTGCGGGGGCAACCGTTGCTGTTGACACATACCAATGGGGGCCC
ACGCCCAACACCACCGTCCCAGTGTTCTACACAACCCTGGATAGTATCTGCGCCGGTTCTAAGACATCTTCGTCT
ACTATAACCCCATCTGCCACCCTTGAACAGCGGAACGACCTCGTTAGCACTACAGTGTCTACCTCGACGACGTAT
ACGCTCGTTGACTGTGCATCACAAGGACTAATCAACTGCCCTATCTATCTCCAGCGGACGACATCAGTGAAGAGC
ACCATGACAACAGTTCTCACAGTCAAATCCGGCATAGATGCCACATATCCCGCGAGCACCTTCTCGTCCTTGACC
AGTGTCATCCCCTTTGGCAGTGATGCTCGCAGACTCGTATCCACATCCGGAACCCCGGTATCCTACATTCCCCCG
ACTGCGACCGCAACAAGTAGTTCCAATCCCGCTACTGACAATGACCACCGCCACCACAACCACCGTTCGAATAAC
AACAAGCTGATTATCGGCTTGAGTGTGGGGCTTGGTGTCCCGGCCGTCATAGCAATAGCATCTGCCCTATGGTTG
GTTTACCGCTTCCTAACCTTTCGCTTGACTCGGAGTTGAGGTAACTAACTAATGTAGGTGGTTTGTATATCGACG
TAAACAATACTCAGCAGTATCGCAATCCGATATGACAGCTCGTCCGTCCGAACTGGATAGAGGTGCAAAAGAACC
ACAGGCAATAGTGGCTGCTGCTGCTGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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