Protein ID | Ani_SJS100_1|g8385.t1 |
Gene name | |
Location | scaffold_065:193368..194501 |
Strand | - |
Gene length (bp) | 1133 |
Transcript length (bp) | 984 |
Coding sequence length (bp) | 984 |
Protein length (aa) | 328 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05920 | Homeobox_KN | Homeobox KN domain | 3.4E-21 | 244 | 283 |
PF00046 | Homeodomain | Homeodomain | 5.5E-07 | 227 | 284 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0003677 | DNA binding | Yes |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0050789 | regulation of biological process | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0065007 | biological regulation | No |
GO:0003674 | molecular_function | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0050794 | regulation of cellular process | No |
GO:0019222 | regulation of metabolic process | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0008150 | biological_process | No |
GO:0010468 | regulation of gene expression | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0003676 | nucleic acid binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Homeodomain |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8385.t1 MAISYASGLPADHTPALPSFRELLPPHLHDEIESTSYFTSRQHARERPTSAAHELTSNPRPFSDRPYGSPPKLPF AGDYAARSSEPQSRMAGHPTDPITGSPRYASRGPSPILPSIRDLQSLPERGLNTSGAAYPDSRALSRPDFAAQEF RAGPVGPHAYPPTNIPGTVPGDRRSVDSFPVMPNQTGYAYPAMAYQSDSEQPSPQSLSHAQQSNFGILGDSIDPK NKRRRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRRQLPALRNQMRNGGNDID SQRQSPFSDMDQTSPESMPSPHQIVKS* |
Coding | >Ani_SJS100_1|g8385.t1 ATGGCCATTTCCTACGCAAGTGGACTTCCAGCGGACCATACTCCTGCTCTTCCGTCATTTCGAGAGCTACTCCCG CCTCATCTCCATGATGAGATCGAATCGACCTCATATTTCACTTCTCGCCAGCATGCGCGCGAGCGGCCTACATCA GCAGCCCACGAATTGACGTCCAATCCCCGCCCTTTCTCTGATCGTCCCTACGGATCACCCCCGAAATTGCCATTC GCTGGCGATTATGCCGCCCGGTCGAGTGAACCCCAAAGCCGGATGGCTGGGCACCCGACCGACCCCATCACAGGC TCTCCTCGTTACGCTTCTCGTGGTCCGAGTCCTATTCTACCTTCCATCCGGGACCTTCAGTCGCTCCCTGAACGG GGACTGAATACTTCGGGCGCCGCTTACCCAGATTCAAGGGCCCTTTCTCGACCAGACTTCGCAGCGCAGGAATTC AGGGCGGGCCCGGTTGGCCCCCACGCATATCCCCCAACCAACATTCCAGGCACAGTACCGGGTGATCGGAGGAGC GTGGATTCTTTTCCCGTCATGCCCAATCAGACTGGCTATGCCTATCCCGCAATGGCTTACCAGAGTGATTCCGAA CAACCTTCTCCGCAATCCCTTTCTCATGCTCAACAATCAAATTTCGGTATCCTTGGAGATTCGATCGATCCCAAG AACAAGCGGAGACGGGGCAACCTGCCCAAGCCAGTCACCGACATTCTGCGTGCCTGGTTCCATGAACATCTTGAC CATCCGTATCCCAGTGAAGAGGACAAACAGATGTTCATGACCCGCACTGGACTCACTATCAGCCAGATCAGCAAT TGGTTCATCAATGCTAGACGGCGTCAACTTCCTGCTCTCCGGAACCAGATGCGAAACGGTGGAAACGACATTGAC TCTCAACGGCAATCTCCCTTCAGTGACATGGACCAGACGTCCCCGGAATCAATGCCGTCTCCTCACCAGATCGTC AAATCATAA |
Transcript | >Ani_SJS100_1|g8385.t1 ATGGCCATTTCCTACGCAAGTGGACTTCCAGCGGACCATACTCCTGCTCTTCCGTCATTTCGAGAGCTACTCCCG CCTCATCTCCATGATGAGATCGAATCGACCTCATATTTCACTTCTCGCCAGCATGCGCGCGAGCGGCCTACATCA GCAGCCCACGAATTGACGTCCAATCCCCGCCCTTTCTCTGATCGTCCCTACGGATCACCCCCGAAATTGCCATTC GCTGGCGATTATGCCGCCCGGTCGAGTGAACCCCAAAGCCGGATGGCTGGGCACCCGACCGACCCCATCACAGGC TCTCCTCGTTACGCTTCTCGTGGTCCGAGTCCTATTCTACCTTCCATCCGGGACCTTCAGTCGCTCCCTGAACGG GGACTGAATACTTCGGGCGCCGCTTACCCAGATTCAAGGGCCCTTTCTCGACCAGACTTCGCAGCGCAGGAATTC AGGGCGGGCCCGGTTGGCCCCCACGCATATCCCCCAACCAACATTCCAGGCACAGTACCGGGTGATCGGAGGAGC GTGGATTCTTTTCCCGTCATGCCCAATCAGACTGGCTATGCCTATCCCGCAATGGCTTACCAGAGTGATTCCGAA CAACCTTCTCCGCAATCCCTTTCTCATGCTCAACAATCAAATTTCGGTATCCTTGGAGATTCGATCGATCCCAAG AACAAGCGGAGACGGGGCAACCTGCCCAAGCCAGTCACCGACATTCTGCGTGCCTGGTTCCATGAACATCTTGAC CATCCGTATCCCAGTGAAGAGGACAAACAGATGTTCATGACCCGCACTGGACTCACTATCAGCCAGATCAGCAAT TGGTTCATCAATGCTAGACGGCGTCAACTTCCTGCTCTCCGGAACCAGATGCGAAACGGTGGAAACGACATTGAC TCTCAACGGCAATCTCCCTTCAGTGACATGGACCAGACGTCCCCGGAATCAATGCCGTCTCCTCACCAGATCGTC AAATCATAA |
Gene | >Ani_SJS100_1|g8385.t1 ATGGCCATTTCCTACGCAAGTGGACTTCCAGCGGACCATACTCCTGCTCTTCCGTCATTTCGAGAGGTGAGCCAA CATTACTACGCCTGGCAAAACCGACCGGTGGTTCCGCCGTAAGAGAATCAGTGAGACTAACGTACTTTTTGATAG CTACTCCCGCCTCATCTCCATGATGAGATCGAATCGACCTCATATTTCACTTCTCGCCAGCATGCGCGCGAGCGG CCTACATCAGCAGCCCACGAATTGACGTCCAATCCCCGCCCTTTCTCTGATCGTCCCTACGGATCACCCCCGAAA TTGCCATTCGCTGGCGATTATGCCGCCCGGTCGAGTGAACCCCAAAGCCGGATGGCTGGGCACCCGACCGACCCC ATCACAGGCTCTCCTCGTTACGCTTCTCGTGGTCCGAGTCCTATTCTACCTTCCATCCGGGACCTTCAGTCGCTC CCTGAACGGGGACTGAATACTTCGGGCGCCGCTTACCCAGATTCAAGGGCCCTTTCTCGACCAGACTTCGCAGCG CAGGAATTCAGGGCGGGCCCGGTTGGCCCCCACGCATATCCCCCAACCAACATTCCAGGCACAGTACCGGGTGAT CGGAGGAGCGTGGATTCTTTTCCCGTCATGCCCAATCAGACTGGCTATGCCTATCCCGCAATGGCTTACCAGAGT GATTCCGAACAACCTTCTCCGCAATCCCTTTCTCATGCTCAACAATCAAATTTCGGTATCCTTGGAGATTCGATC GATCCCAAGAACAAGCGGAGACGGGGCAACCTGCCCAAGCCAGTCACCGACATTCTGCGTGCCTGGTTCCATGAA CATCTTGACCATCCGTATCCCAGTGAAGAGGACAAACAGATGTTCATGACCCGCACTGGACTCACTATCAGCCAG GTTAGTAGCAGTTCTCCCCCCTTGTCTAACAAATCAGCACATGCTAATCAAAGATCTATATACAGATCAGCAATT GGTTCATCAATGCTAGACGGCGTCAACTTCCTGCTCTCCGGAACCAGATGCGAAACGGTGGAAACGACATTGACT CTCAACGGCAATCTCCCTTCAGTGACATGGACCAGACGTCCCCGGAATCAATGCCGTCTCCTCACCAGATCGTCA AATCATAA |