Protein ID | Ani_SJS100_1|g8367.t1 |
Gene name | |
Location | scaffold_065:125462..128015 |
Strand | - |
Gene length (bp) | 2553 |
Transcript length (bp) | 1395 |
Coding sequence length (bp) | 1395 |
Protein length (aa) | 465 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10199 | Adaptin_binding | Alpha and gamma adaptin binding protein p34 | 1.2E-20 | 337 | 459 |
PF01423 | LSM | LSM domain | 2.9E-13 | 14 | 77 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8367.t1 MGKLTSTIGIPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDGRVSHLDQVYIRGSHVKF FIVPDMLRNAPMFRSRGQRGRGVGLARAPGSSSPTPTPTLSSATTLAASSTTSIASSTTITTFAGYTTHPPLHLS NKYYTADVPIWVDEIPLPTPDSSEPTPSVSGSTISPAQWKSEFSSPEAQVVRDAIGAVMICFRNPVQMDPVPGQE QQDVEDRADVRGLKEFVKAVGEVRALIEEERGGVGEVPGLVVLVGEKKTGSGKVGSGDGEEDEDGLGLEIDEVFS EGWWEDQICEMELMGMEVVRWDGKEGEEEEGRNRYGELQGMRRIKEVLETHDWAATEDAETGLLHDGVDDDLERE LLGLDDADNGFDLEVDELQREMVGLRMAIERGGGDGFDDDDEGDEELRVDAVEALLLRMRAIKDISDELPEAERK RFAAKAVRDIMREM* |
Coding | >Ani_SJS100_1|g8367.t1 ATGGGCAAGTTGACCAGCACGATCGGTATCCCGATCAAGCTTCTTAATGAGGCGCAGGGCCACGTCGTCACACTC GAGATCACGTCCGGGGTTGTCTACCGTGGAAAACTCCTAGAGGCTGAGGACAACATGAACGTCCAACTGAAGGAT ATCACGGTCACCGCGCGCGACGGCCGCGTGTCACATCTCGACCAGGTGTACATTCGGGGAAGCCATGTGAAGTTT TTCATTGTGCCGGATATGCTTAGAAACGCTCCCATGTTCCGCTCACGAGGCCAGCGCGGTCGCGGTGTCGGTCTT GCTCGTGCACCAGGATCCTCCTCGCCAACACCAACTCCGACCCTCTCCTCCGCCACAACCCTCGCCGCCTCCTCC ACCACCTCCATCGCATCCAGCACCACTATCACCACCTTCGCCGGCTACACCACGCACCCGCCCCTCCACCTCTCA AACAAATACTACACAGCCGACGTCCCGATCTGGGTCGACGAGATCCCTCTCCCAACCCCCGATTCCTCTGAACCG ACCCCCTCAGTGTCCGGGAGTACCATCTCCCCCGCGCAATGGAAGTCCGAGTTCTCCAGCCCCGAAGCGCAAGTC GTCCGGGATGCGATCGGCGCCGTGATGATCTGTTTCCGGAATCCGGTGCAGATGGATCCGGTACCTGGACAGGAG CAGCAGGATGTGGAAGACAGGGCTGATGTGCGCGGGCTGAAGGAGTTTGTCAAGGCTGTTGGGGAGGTGAGGGCT TTGATTGAAGAGGAGAGGGGCGGGGTAGGGGAGGTGCCGGGGTTGGTTGTTTTGGTGGGGGAGAAGAAGACGGGG TCCGGGAAAGTGGGTTCTGGGGATGGTGAGGAGGATGAGGATGGGCTGGGATTGGAGATTGATGAGGTGTTTTCG GAGGGGTGGTGGGAGGATCAGATTTGTGAGATGGAGTTGATGGGGATGGAGGTGGTGAGGTGGGATGGGAAGGAG GGAGAAGAGGAGGAGGGGAGGAATCGGTACGGTGAATTACAGGGCATGCGCCGGATTAAAGAGGTACTGGAGACG CATGATTGGGCTGCGACGGAGGATGCAGAGACAGGGTTACTGCATGATGGGGTTGATGATGATCTTGAGCGCGAG CTTTTGGGCTTGGATGATGCGGATAATGGGTTCGATTTGGAGGTGGATGAACTGCAGCGCGAGATGGTCGGGTTG CGCATGGCGATTGAGCGGGGAGGAGGGGATGGGTTTGACGATGACGATGAAGGGGACGAGGAGTTGCGCGTCGAT GCGGTCGAGGCGCTGTTGCTCCGGATGAGAGCCATCAAGGATATCAGCGACGAGTTGCCCGAAGCGGAGAGGAAA CGGTTTGCAGCAAAGGCCGTGCGTGATATCATGAGGGAGATGTAG |
Transcript | >Ani_SJS100_1|g8367.t1 ATGGGCAAGTTGACCAGCACGATCGGTATCCCGATCAAGCTTCTTAATGAGGCGCAGGGCCACGTCGTCACACTC GAGATCACGTCCGGGGTTGTCTACCGTGGAAAACTCCTAGAGGCTGAGGACAACATGAACGTCCAACTGAAGGAT ATCACGGTCACCGCGCGCGACGGCCGCGTGTCACATCTCGACCAGGTGTACATTCGGGGAAGCCATGTGAAGTTT TTCATTGTGCCGGATATGCTTAGAAACGCTCCCATGTTCCGCTCACGAGGCCAGCGCGGTCGCGGTGTCGGTCTT GCTCGTGCACCAGGATCCTCCTCGCCAACACCAACTCCGACCCTCTCCTCCGCCACAACCCTCGCCGCCTCCTCC ACCACCTCCATCGCATCCAGCACCACTATCACCACCTTCGCCGGCTACACCACGCACCCGCCCCTCCACCTCTCA AACAAATACTACACAGCCGACGTCCCGATCTGGGTCGACGAGATCCCTCTCCCAACCCCCGATTCCTCTGAACCG ACCCCCTCAGTGTCCGGGAGTACCATCTCCCCCGCGCAATGGAAGTCCGAGTTCTCCAGCCCCGAAGCGCAAGTC GTCCGGGATGCGATCGGCGCCGTGATGATCTGTTTCCGGAATCCGGTGCAGATGGATCCGGTACCTGGACAGGAG CAGCAGGATGTGGAAGACAGGGCTGATGTGCGCGGGCTGAAGGAGTTTGTCAAGGCTGTTGGGGAGGTGAGGGCT TTGATTGAAGAGGAGAGGGGCGGGGTAGGGGAGGTGCCGGGGTTGGTTGTTTTGGTGGGGGAGAAGAAGACGGGG TCCGGGAAAGTGGGTTCTGGGGATGGTGAGGAGGATGAGGATGGGCTGGGATTGGAGATTGATGAGGTGTTTTCG GAGGGGTGGTGGGAGGATCAGATTTGTGAGATGGAGTTGATGGGGATGGAGGTGGTGAGGTGGGATGGGAAGGAG GGAGAAGAGGAGGAGGGGAGGAATCGGTACGGTGAATTACAGGGCATGCGCCGGATTAAAGAGGTACTGGAGACG CATGATTGGGCTGCGACGGAGGATGCAGAGACAGGGTTACTGCATGATGGGGTTGATGATGATCTTGAGCGCGAG CTTTTGGGCTTGGATGATGCGGATAATGGGTTCGATTTGGAGGTGGATGAACTGCAGCGCGAGATGGTCGGGTTG CGCATGGCGATTGAGCGGGGAGGAGGGGATGGGTTTGACGATGACGATGAAGGGGACGAGGAGTTGCGCGTCGAT GCGGTCGAGGCGCTGTTGCTCCGGATGAGAGCCATCAAGGATATCAGCGACGAGTTGCCCGAAGCGGAGAGGAAA CGGTTTGCAGCAAAGGCCGTGCGTGATATCATGAGGGAGATGTAG |
Gene | >Ani_SJS100_1|g8367.t1 ATGGGCAAGTTGACCAGCACGATCGGTATCCCGATCAAGCTTCTTAATGAGGCGCAGGTTAGTCTATCCTTCATC CTAAGCTATTGCTTGTATCTATGTATTGCGATTAAGCTAACGCGGGATTCTGCATAGGGCCACGTCGTCACACTC GAGATCACGTCCGGGGTTGTCTACCGTGGAAAACTCCTAGAGGGTGCGTTGCTTCACCCCTCCTCAACACCTATC CATCCTCTCCAATACACCAATGTCAAATATTCTCGTCACTAACATCCTCTGCTATAGCTGAGGACAACATGAACG TCCAACTGAAGGATATCACGGTCACCGCGCGCGACGGCCGCGTGTCACATCTCGACCAGGTGTACATTCGGGGAA GCCATGTGAAGTTTTTCATTGTGCCGGATATGCTTAGGTCGGTTGCCACCCACCTTAATTTTCTACATATTTATC AGGGATATGGGGCAATGCTAACTAGTATGGTTATAGAAACGCTCCCATGTTCCGCTCACGAGGCCAGCGCGGTCG CGGTGTCGGTCTTGCTCGTGGTAAGGCCACGGTGCAGAGGGCGAGGGGACAGAGACGGGGTTGATTCGGATGGAA TACTAGTGGATAAGTGGATGGATGCTTCGGTGCGGCGTTTTGTTCTATTTGAGTTCTTTCTGTGTCTCCTTTTCG TATCTATAAACTTGTCTCGTATTGGCTGTCTGGGTCGTCGGGTCTGATATCATATCGAATAAATCGAGTTGATTG GGTTAAATTGGGTTTCCTGAGGGCATTGATGATGGTAATGTGATTGTGGCAGTGCTGCTTGGGTTCCGTATGGTG TTTCCTTGGGAGGATTCTCAAAATGTAGTGATGAGACCAAAGCTGTGCTGCAGATGCACAGACAGCTAAGCTGAT AGGCTAAATTGAACCCCACGACACGAAGAATATGGAATATATCATTACCACATTGTGAATAACTCAAAGCATAAT TCTTATGATAAGAGGATATGAAACATGGTAGGGAATGTCAACACGAGATCACCAGTTCAAATCAATCACTACTAA CCACCTCCGAGCTCTCTCCGCCGTCCCCGCACCCGACCAACTTTCTCTCCTCAACTCTATCCCTTCACGATAAAT ACACAGCAACCCTACATTCATCTACACCACTTACCTCATCTCAAACACTCCCACATCAACATCCGAAAATGCCAC CCACAACGACATCAACAACCTCCAACCCAACCCCCATCACCAACCCCCGCCGCCTCCTCATCCTCACACCAACCA CCCACTCCCAATCCATCGTCCCTCCCCTCCTCCACTCCCTAACAGGCACCCCAGTCACCACTCCCCCAACAGCAC CAGGATCCTCCTCGCCAACACCAACTCCGACCCTCTCCTCCGCCACAACCCTCGCCGCCTCCTCCACCACCTCCA TCGCATCCAGCACCACTATCACCACCTTCGCCGGCTACACCACGCACCCGCCCCTCCACCTCTCAAACAAATACT ACACAGCCGACGTCCCGATCTGGGTCGACGAGATCCCTCTCCCAACCCCCGATTCCTCTGAACCGACCCCCTCAG TGTCCGGGAGTACCATCTCCCCCGCGCAATGGAAGTCCGAGTTCTCCAGCCCCGAAGCGCAAGTCGTCCGGGATG CGATCGGCGCCGTGATGATCTGTTTCCGGAATCCGGTGCAGATGGATCCGGTACCTGGACAGGAGCAGCAGGATG TGGAAGACAGGGCTGATGTGCGCGGGCTGAAGGAGTTTGTCAAGGCTGTTGGGGAGGTGAGGGCTTTGATTGAAG AGGAGAGGGGCGGGGTAGGGGAGGTGCCGGGGTTGGTTGTTTTGGTGGGGGAGAAGAAGACGGGGTCCGGGAAAG TGGGTTCTGGGGATGGTGAGGAGGATGAGGATGGGCTGGGATTGGAGATTGATGAGGTGTTTTCGGAGGGGTGGT GGGAGGATCAGATTTGTGAGATGGAGTTGATGGGGATGGAGGTGGTGAGGTGGGATGGGAAGGAGGGAGAAGAGG AGGAGGGGAGGAATCGGTACGGTGGTATGTTCATTCTTTTCTTATTTTTTTGGTATACTTATTGGTGATATGCTA ACTGGTTGTAGAATTACAGGGCATGCGCCGGATTAAAGAGGTACTGGAGACGCATGATTGGGCTGCGACGGAGGA TGCAGAGACAGGGTTACTGCATGATGGGGTTGATGATGATCTTGAGCGCGAGCTTTTGGGCTTGGATGATGCGGA TAATGGGTTCGATTTGGAGGTGGATGAACTGCAGCGCGAGATGGTCGGGTTGCGCATGGCGATTGAGCGGGGAGG AGGGGATGGGTTTGACGATGACGATGAAGGGGACGAGGAGTTGCGCGTCGATGCGGTCGAGGCGCTGTTGCTCCG GATGAGAGCCATCAAGGGTAGTGATGATTCCTTCTGTCTGCAATGATCCCGGTGTTTGCTAACATGGTAATAGAT ATCAGCGACGAGTTGCCCGAAGCGGAGAGGAAACGGTTTGCAGCAAAGGCCGTGCGTGATATCATGAGGGAGATG TAG |