Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8359.t1
Gene name
Locationscaffold_065:93235..94296
Strand-
Gene length (bp)1061
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00240 ubiquitin Ubiquitin family 1.6E-32 3 74
PF00240 ubiquitin Ubiquitin family 1.6E-32 79 150
PF00240 ubiquitin Ubiquitin family 1.6E-32 155 226
PF00240 ubiquitin Ubiquitin family 1.6E-32 231 302
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 2.4E-15 1 71
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 2.4E-15 77 147
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 2.4E-15 153 223
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 2.4E-15 229 299
PF14560 Ubiquitin_2 Ubiquitin-like domain 1.0E-03 12 69
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.2E-04 87 145
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.2E-04 163 221
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.2E-04 239 297
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.5E-01 15 71
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 89 147
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 165 223
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.5E-01 241 299

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup317
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g6925.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g8443.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g10535.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g7188.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g9299.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g10589.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g7317.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g7358.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g6062.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g9542.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g11013.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g5261.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g3165.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g9936.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g6348.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g9086.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g9857.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g409.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g9311.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g6041.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g8359.t1 (this protein)
Aspergillus niger CBS 147371 Ani_SJS27_1|g3837.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g10878.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g6860.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g8783.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8359.t1
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
GMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
GGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
RGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGN*
Coding >Ani_SJS100_1|g8359.t1
ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAAC
GTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTG
GAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGT
GGTATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC
AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAG
CTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGT
GGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACACTGGAAGTTGAATCTTCCGACACAATT
GATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAG
CAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTC
CGTGGTGGTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACC
ATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGT
AAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGT
CTCCGTGGCGGAAACTAA
Transcript >Ani_SJS100_1|g8359.t1
ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAAC
GTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTG
GAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGT
GGTATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC
AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAG
CTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGT
GGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACACTGGAAGTTGAATCTTCCGACACAATT
GATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAG
CAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTC
CGTGGTGGTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACC
ATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGT
AAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGT
CTCCGTGGCGGAAACTAA
Gene >Ani_SJS100_1|g8359.t1
ATGCAGATCTTCGTTAAGACCCGTGAGTATTCCTAACCATCTCTCAAGCTTAGCATCAGGAATCCATCATCTGAC
TGTTTGTTTCCATCTAGTCACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAA
GACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGA
TGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTAT
GCAGATTTGTAAGTTGTCCTGAACTCTATTTGCCACACTGTTGGCCACCTTCACTTGGACCATATACTGACCTCA
TATTAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGA
AGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGG
ATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA
TGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACACTGGAAGTTGAATCTTCCGACACAATTGATAACG
TTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGG
AGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTG
GTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATA
ACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGT
TGGAAGATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTG
GCGGAAACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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