Protein ID | Ani_SJS100_1|g8358.t1 |
Gene name | |
Location | scaffold_065:90506..92698 |
Strand | - |
Gene length (bp) | 2192 |
Transcript length (bp) | 2127 |
Coding sequence length (bp) | 2127 |
Protein length (aa) | 709 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07576 | BRAP2 | BRCA1-associated protein 2 | 6.2E-36 | 228 | 319 |
PF02148 | zf-UBP | Zn-finger in ubiquitin-hydrolases and other protein | 1.6E-20 | 440 | 499 |
PF13639 | zf-RING_2 | Ring finger domain | 6.7E-08 | 378 | 418 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008270 | zinc ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0046872 | metal ion binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8358.t1 MPSYFYHIAIELFARPHSDLQGTYPGVDKHSTSLSFDSACESLLPFQKRRHSPWAHRSSRHQAHGKHPRPSPNTF AETHGSDSTTSVADLRTPHLYTTSPTSASDFERDLRLDKVSIECIDMIPSEQDTTAAKRTGWKNAKENPIATGIG TDILGGLRTKGKYIPLDQSTSESVWGIVHLYRDAQETPFLTEEDYPSYLKGSAAAARTPYDEVAGSSRPPRAAEE HMPDEDCTTLCILAVPSYMSPSDFLGFVGESTMNDVNHFRMIKTARANRYMVLMKFRNGKKAKEWQKDWNGKVFN SMEPETCHVVFVKTVEIQAVEPGALSTGSQTGLLSPHAATSPVRTTPISTTQSSSIPSATLSTRPLAPPTPALIE LPTCPVCLERMDETTGLLTIICQHVFHCTCLQKWKGSGCPVCRYTQDDIRRNSQAALYDDEPAECSVCHSDINLW ICLICGNVGCGRYDGAHAFAHYKETAHAFAMDLSTQRVWDYVGDAYVHRIIQSKTDGKLVELPAADNSALDPPDW TDAVPREKLENMSVEYTHLLTSQLESQRAYFEEVVERAVDKASQASAAASSAQDAVEKATASLKSLQAQYDTLTS EIIPGLERDKARAEKRAEKFETMTRKMEKEWREEKTMNENLIERVELLKSEVESLKLANADLTEQNRDLTFFISG SARLQNQGDDVVQGTVSVPEPEKPKKKGKGRKK* |
Coding | >Ani_SJS100_1|g8358.t1 ATGCCCTCCTACTTTTACCACATTGCGATCGAATTATTTGCTCGCCCGCACTCTGACCTCCAAGGCACATACCCA GGCGTGGACAAGCACTCGACGTCGCTATCTTTCGACTCCGCATGCGAATCTCTACTCCCGTTCCAGAAGCGCCGG CACTCACCGTGGGCACATCGATCTTCTCGTCATCAAGCGCATGGGAAACACCCACGCCCCTCACCCAACACTTTC GCCGAAACCCACGGCTCAGACTCTACAACCAGCGTTGCAGACCTCCGTACCCCTCACCTCTACACGACTTCGCCG ACAAGCGCATCCGACTTCGAGCGCGACCTCAGGCTTGATAAAGTATCCATCGAGTGCATTGACATGATTCCATCG GAGCAGGACACAACTGCTGCGAAGCGGACGGGCTGGAAGAATGCAAAGGAGAATCCCATCGCGACCGGGATCGGC ACGGATATCTTGGGAGGACTACGCACGAAAGGCAAATACATACCGCTAGACCAGAGTACGTCGGAGAGTGTTTGG GGAATCGTGCATCTTTACCGAGATGCTCAGGAGACGCCGTTCTTGACAGAAGAGGACTACCCCTCGTACTTGAAA GGTTCGGCAGCTGCGGCGAGGACACCGTACGATGAAGTGGCCGGCAGCAGTAGGCCCCCGCGCGCAGCAGAAGAG CATATGCCCGATGAGGATTGCACGACGCTATGCATCCTAGCCGTGCCTTCCTATATGTCGCCGTCCGACTTTCTG GGGTTCGTGGGCGAATCGACTATGAACGATGTCAATCATTTTCGCATGATCAAGACCGCTCGAGCGAACCGGTAT ATGGTTTTGATGAAGTTCCGCAACGGGAAGAAGGCCAAGGAGTGGCAGAAAGACTGGAACGGAAAGGTGTTTAAC AGCATGGAGCCCGAAACGTGTCATGTCGTCTTCGTGAAAACCGTCGAGATACAAGCCGTTGAGCCGGGCGCGCTG TCTACTGGATCACAGACTGGTCTTCTCTCTCCACACGCTGCAACGAGCCCTGTGCGGACGACACCCATTTCAACT ACGCAGTCAAGCTCCATACCTTCCGCTACCCTCTCTACCAGGCCACTGGCGCCTCCTACCCCTGCGCTTATTGAA CTGCCAACATGCCCGGTGTGTCTAGAGCGCATGGATGAGACCACCGGCTTGCTGACCATCATATGCCAGCACGTC TTTCACTGCACGTGTTTACAGAAGTGGAAAGGAAGTGGCTGCCCGGTATGTCGATACACACAAGACGACATCCGG CGGAACAGCCAAGCCGCATTATATGATGATGAACCAGCCGAGTGCAGCGTGTGCCACTCGGACATTAACCTGTGG ATATGCCTTATTTGCGGAAACGTCGGCTGTGGACGCTATGACGGGGCACATGCATTTGCGCATTACAAGGAAACG GCGCATGCCTTTGCTATGGATCTCTCTACGCAGCGCGTCTGGGACTACGTCGGCGATGCCTACGTGCACCGCATC ATCCAAAGCAAAACCGACGGCAAGCTCGTGGAACTCCCAGCAGCCGACAACAGTGCGCTTGACCCTCCAGACTGG ACGGACGCCGTTCCGCGGGAGAAGCTAGAAAACATGAGCGTGGAATATACCCACTTACTTACTAGCCAACTGGAA AGCCAACGGGCCTATTTCGAAGAGGTAGTTGAGCGCGCCGTGGACAAAGCGTCTCAGGCCAGTGCTGCTGCCTCT TCCGCGCAGGACGCAGTCGAGAAAGCCACCGCCAGCTTGAAGAGCCTACAGGCGCAATATGACACCCTGACTAGC GAGATCATCCCCGGACTGGAGCGCGATAAGGCGCGGGCCGAAAAGCGCGCGGAGAAGTTCGAGACCATGACGCGC AAGATGGAGAAGGAGTGGCGGGAAGAGAAGACGATGAATGAGAATCTGATAGAACGGGTTGAGCTTTTGAAGTCC GAGGTGGAGAGTCTGAAACTTGCGAATGCCGACTTGACGGAACAGAACCGGGACCTCACGTTCTTTATTAGCGGG TCGGCGCGACTGCAGAATCAGGGCGATGATGTGGTGCAGGGGACGGTCAGTGTGCCTGAACCGGAGAAGCCGAAG AAGAAGGGGAAGGGGAGGAAGAAGTAA |
Transcript | >Ani_SJS100_1|g8358.t1 ATGCCCTCCTACTTTTACCACATTGCGATCGAATTATTTGCTCGCCCGCACTCTGACCTCCAAGGCACATACCCA GGCGTGGACAAGCACTCGACGTCGCTATCTTTCGACTCCGCATGCGAATCTCTACTCCCGTTCCAGAAGCGCCGG CACTCACCGTGGGCACATCGATCTTCTCGTCATCAAGCGCATGGGAAACACCCACGCCCCTCACCCAACACTTTC GCCGAAACCCACGGCTCAGACTCTACAACCAGCGTTGCAGACCTCCGTACCCCTCACCTCTACACGACTTCGCCG ACAAGCGCATCCGACTTCGAGCGCGACCTCAGGCTTGATAAAGTATCCATCGAGTGCATTGACATGATTCCATCG GAGCAGGACACAACTGCTGCGAAGCGGACGGGCTGGAAGAATGCAAAGGAGAATCCCATCGCGACCGGGATCGGC ACGGATATCTTGGGAGGACTACGCACGAAAGGCAAATACATACCGCTAGACCAGAGTACGTCGGAGAGTGTTTGG GGAATCGTGCATCTTTACCGAGATGCTCAGGAGACGCCGTTCTTGACAGAAGAGGACTACCCCTCGTACTTGAAA GGTTCGGCAGCTGCGGCGAGGACACCGTACGATGAAGTGGCCGGCAGCAGTAGGCCCCCGCGCGCAGCAGAAGAG CATATGCCCGATGAGGATTGCACGACGCTATGCATCCTAGCCGTGCCTTCCTATATGTCGCCGTCCGACTTTCTG GGGTTCGTGGGCGAATCGACTATGAACGATGTCAATCATTTTCGCATGATCAAGACCGCTCGAGCGAACCGGTAT ATGGTTTTGATGAAGTTCCGCAACGGGAAGAAGGCCAAGGAGTGGCAGAAAGACTGGAACGGAAAGGTGTTTAAC AGCATGGAGCCCGAAACGTGTCATGTCGTCTTCGTGAAAACCGTCGAGATACAAGCCGTTGAGCCGGGCGCGCTG TCTACTGGATCACAGACTGGTCTTCTCTCTCCACACGCTGCAACGAGCCCTGTGCGGACGACACCCATTTCAACT ACGCAGTCAAGCTCCATACCTTCCGCTACCCTCTCTACCAGGCCACTGGCGCCTCCTACCCCTGCGCTTATTGAA CTGCCAACATGCCCGGTGTGTCTAGAGCGCATGGATGAGACCACCGGCTTGCTGACCATCATATGCCAGCACGTC TTTCACTGCACGTGTTTACAGAAGTGGAAAGGAAGTGGCTGCCCGGTATGTCGATACACACAAGACGACATCCGG CGGAACAGCCAAGCCGCATTATATGATGATGAACCAGCCGAGTGCAGCGTGTGCCACTCGGACATTAACCTGTGG ATATGCCTTATTTGCGGAAACGTCGGCTGTGGACGCTATGACGGGGCACATGCATTTGCGCATTACAAGGAAACG GCGCATGCCTTTGCTATGGATCTCTCTACGCAGCGCGTCTGGGACTACGTCGGCGATGCCTACGTGCACCGCATC ATCCAAAGCAAAACCGACGGCAAGCTCGTGGAACTCCCAGCAGCCGACAACAGTGCGCTTGACCCTCCAGACTGG ACGGACGCCGTTCCGCGGGAGAAGCTAGAAAACATGAGCGTGGAATATACCCACTTACTTACTAGCCAACTGGAA AGCCAACGGGCCTATTTCGAAGAGGTAGTTGAGCGCGCCGTGGACAAAGCGTCTCAGGCCAGTGCTGCTGCCTCT TCCGCGCAGGACGCAGTCGAGAAAGCCACCGCCAGCTTGAAGAGCCTACAGGCGCAATATGACACCCTGACTAGC GAGATCATCCCCGGACTGGAGCGCGATAAGGCGCGGGCCGAAAAGCGCGCGGAGAAGTTCGAGACCATGACGCGC AAGATGGAGAAGGAGTGGCGGGAAGAGAAGACGATGAATGAGAATCTGATAGAACGGGTTGAGCTTTTGAAGTCC GAGGTGGAGAGTCTGAAACTTGCGAATGCCGACTTGACGGAACAGAACCGGGACCTCACGTTCTTTATTAGCGGG TCGGCGCGACTGCAGAATCAGGGCGATGATGTGGTGCAGGGGACGGTCAGTGTGCCTGAACCGGAGAAGCCGAAG AAGAAGGGGAAGGGGAGGAAGAAGTAA |
Gene | >Ani_SJS100_1|g8358.t1 ATGCCCTCCTACTTTTACCACATTGCGATCGAATTATTTGCTCGCCCGCACTCTGACCTCCAAGGCACATACCCA GGCGTGGACAAGCACTCGACGTCGCTATCTTTCGACTCCGCATGCGAATCTCTACTCCCGTTCCAGAAGCGCCGG CACTCACCGTGGGCACATCGATCTTCTCGTCATCAAGCGCATGGGAAACACCCACGCCCCTCACCCAACACTTTC GCCGAAACCCACGGCTCAGACTCTACAACCAGCGTTGCAGACCTCCGTACCCCTCACCTCTACACGACTTCGCCG ACAAGCGCATCCGACTTCGAGCGCGACCTCAGGCTTGATAAAGTATCCATCGAGTGCATTGACATGATTCCATCG GAGCAGGACACAACTGCTGCGAAGCGGACGGGCTGGAAGAATGCAAAGGAGAATCCCATCGCGACCGGGATCGGC ACGGATATCTTGGGAGGACTACGCACGAAAGGCAAATACATACCGCTAGACCAGAGTACGTCGGAGAGTGTTTGG GGAATCGTGCATCTTTACCGAGATGCTCAGGAGACGCCGTTCTTGACAGAAGAGGACTACCCCTCGTACTTGAAA GGTTCGGCAGCTGCGGCGAGGACACCGTACGATGAAGTGGCCGGCAGCAGTAGGCCCCCGCGCGCAGCAGAAGAG CATATGCCCGATGAGGATTGCACGACGCTATGCATCCTAGCCGTGCCTTCCTATATGTCGCCGTCCGACTTTCTG GGGTTCGTGGGCGAATCGACTATGAACGATGTCAATCATTTTCGCATGATCAAGACCGCTCGAGCGAACCGGTAT ATGGTTTTGATGAAGTTCCGCAACGGGAAGAAGGCCAAGGAGTGGCAGAAAGACTGGAACGGAAAGGTGTTTAAC AGCATGGAGGTAAGTGCATCATGCATTGCTTGGTGCAGATCCACAGCTGCGATGCTAACACGCCCTTGCTTCAGC CCGAAACGTGTCATGTCGTCTTCGTGAAAACCGTCGAGATACAAGCCGTTGAGCCGGGCGCGCTGTCTACTGGAT CACAGACTGGTCTTCTCTCTCCACACGCTGCAACGAGCCCTGTGCGGACGACACCCATTTCAACTACGCAGTCAA GCTCCATACCTTCCGCTACCCTCTCTACCAGGCCACTGGCGCCTCCTACCCCTGCGCTTATTGAACTGCCAACAT GCCCGGTGTGTCTAGAGCGCATGGATGAGACCACCGGCTTGCTGACCATCATATGCCAGCACGTCTTTCACTGCA CGTGTTTACAGAAGTGGAAAGGAAGTGGCTGCCCGGTATGTCGATACACACAAGACGACATCCGGCGGAACAGCC AAGCCGCATTATATGATGATGAACCAGCCGAGTGCAGCGTGTGCCACTCGGACATTAACCTGTGGATATGCCTTA TTTGCGGAAACGTCGGCTGTGGACGCTATGACGGGGCACATGCATTTGCGCATTACAAGGAAACGGCGCATGCCT TTGCTATGGATCTCTCTACGCAGCGCGTCTGGGACTACGTCGGCGATGCCTACGTGCACCGCATCATCCAAAGCA AAACCGACGGCAAGCTCGTGGAACTCCCAGCAGCCGACAACAGTGCGCTTGACCCTCCAGACTGGACGGACGCCG TTCCGCGGGAGAAGCTAGAAAACATGAGCGTGGAATATACCCACTTACTTACTAGCCAACTGGAAAGCCAACGGG CCTATTTCGAAGAGGTAGTTGAGCGCGCCGTGGACAAAGCGTCTCAGGCCAGTGCTGCTGCCTCTTCCGCGCAGG ACGCAGTCGAGAAAGCCACCGCCAGCTTGAAGAGCCTACAGGCGCAATATGACACCCTGACTAGCGAGATCATCC CCGGACTGGAGCGCGATAAGGCGCGGGCCGAAAAGCGCGCGGAGAAGTTCGAGACCATGACGCGCAAGATGGAGA AGGAGTGGCGGGAAGAGAAGACGATGAATGAGAATCTGATAGAACGGGTTGAGCTTTTGAAGTCCGAGGTGGAGA GTCTGAAACTTGCGAATGCCGACTTGACGGAACAGAACCGGGACCTCACGTTCTTTATTAGCGGGTCGGCGCGAC TGCAGAATCAGGGCGATGATGTGGTGCAGGGGACGGTCAGTGTGCCTGAACCGGAGAAGCCGAAGAAGAAGGGGA AGGGGAGGAAGAAGTAA |