© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8349.t1 |
| Gene name | |
| Location | scaffold_065:57272..58005 |
| Strand | + |
| Gene length (bp) | 733 |
| Transcript length (bp) | 621 |
| Coding sequence length (bp) | 621 |
| Protein length (aa) | 207 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01981 | PTH2 | Peptidyl-tRNA hydrolase PTH2 | 2.4E-43 | 91 | 206 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004045 | aminoacyl-tRNA hydrolase activity | Yes |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0052689 | carboxylic ester hydrolase activity | No |
| GO:0140101 | catalytic activity, acting on a tRNA | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8349.t1 MSDLDRTAPSTAAYVVATAILAGITGYFIGQGSTLGLFSNKEKEGWPNSYNVKPHLDSSDEDYESEEEEEDSEEE GDGTELANFDSSNEEVKLVLVVRTDLGMTKGKIAAQCSHATLACYKYLTAYTPNSGILRRWESQGQAKIALQVKS EEEMEEMQAKAISLGLCARVITDAGRTQIASGSRTVLGVLGPKSVVDSVTGHLKLL* |
| Coding | >Ani_SJS100_1|g8349.t1 ATGTCCGACCTCGACCGCACAGCCCCCTCGACAGCCGCCTACGTGGTCGCGACGGCCATCCTAGCCGGCATAACG GGCTACTTCATCGGCCAAGGCAGCACCCTAGGTCTCTTCAGCAACAAAGAAAAAGAAGGCTGGCCGAACAGCTAC AATGTGAAACCGCACCTAGACTCGTCGGACGAAGACTACGAATCCGAAGAGGAAGAAGAGGACAGTGAAGAAGAA GGCGACGGCACTGAGCTCGCCAACTTCGATAGCTCCAATGAAGAAGTGAAATTGGTTCTTGTCGTGCGGACGGAT TTGGGTATGACGAAGGGTAAAATCGCCGCCCAATGCTCCCACGCTACACTCGCATGCTACAAATACCTCACGGCG TACACGCCTAACAGCGGCATCCTGCGACGATGGGAATCGCAGGGTCAGGCGAAGATCGCGCTGCAGGTCAAGTCG GAGGAGGAGATGGAGGAGATGCAGGCCAAGGCGATTAGTTTGGGACTTTGCGCCAGGGTGATTACGGATGCTGGA CGGACGCAGATTGCTAGTGGGAGTCGCACGGTGTTGGGGGTTTTGGGACCCAAGAGTGTGGTGGATTCTGTGACG GGGCATTTGAAGTTGTTGTAG |
| Transcript | >Ani_SJS100_1|g8349.t1 ATGTCCGACCTCGACCGCACAGCCCCCTCGACAGCCGCCTACGTGGTCGCGACGGCCATCCTAGCCGGCATAACG GGCTACTTCATCGGCCAAGGCAGCACCCTAGGTCTCTTCAGCAACAAAGAAAAAGAAGGCTGGCCGAACAGCTAC AATGTGAAACCGCACCTAGACTCGTCGGACGAAGACTACGAATCCGAAGAGGAAGAAGAGGACAGTGAAGAAGAA GGCGACGGCACTGAGCTCGCCAACTTCGATAGCTCCAATGAAGAAGTGAAATTGGTTCTTGTCGTGCGGACGGAT TTGGGTATGACGAAGGGTAAAATCGCCGCCCAATGCTCCCACGCTACACTCGCATGCTACAAATACCTCACGGCG TACACGCCTAACAGCGGCATCCTGCGACGATGGGAATCGCAGGGTCAGGCGAAGATCGCGCTGCAGGTCAAGTCG GAGGAGGAGATGGAGGAGATGCAGGCCAAGGCGATTAGTTTGGGACTTTGCGCCAGGGTGATTACGGATGCTGGA CGGACGCAGATTGCTAGTGGGAGTCGCACGGTGTTGGGGGTTTTGGGACCCAAGAGTGTGGTGGATTCTGTGACG GGGCATTTGAAGTTGTTGTAG |
| Gene | >Ani_SJS100_1|g8349.t1 ATGTCCGACCTCGACCGCACAGCCCCCTCGACAGCCGCCTACGTGGTCGCGACGGCCATCCTAGCCGGCATAACG GGCTACTTCATCGGCCAAGGCAGCACCCTAGGTCTCTTCAGCAACAAAGAAAAAGAAGGCTGGCCGAACAGCTAC AATGTGAAACCGCACCTAGACTCGTCGGACGAAGACTACGAATCCGAAGAGGAAGAAGAGGACAGTGAAGAAGAA GGCGACGGCACTGAGCTCGCCAACTTCGATAGCTCCAATGAAGAAGTGAAATTGGTTCTTGTCGTGCGGACGGAT TTGGGTATGACGAAGGGTAAGCTTATTCCCTTTTTCAATTCTCTACAATATTATGTTCTCTTGCTATCATTTGTT GCTTGCTACTGTTGTTTTTCGTGAAGCGCATGCTGATAGTTCTGATGTCGCAGGTAAAATCGCCGCCCAATGCTC CCACGCTACACTCGCATGCTACAAATACCTCACGGCGTACACGCCTAACAGCGGCATCCTGCGACGATGGGAATC GCAGGGTCAGGCGAAGATCGCGCTGCAGGTCAAGTCGGAGGAGGAGATGGAGGAGATGCAGGCCAAGGCGATTAG TTTGGGACTTTGCGCCAGGGTGATTACGGATGCTGGACGGACGCAGATTGCTAGTGGGAGTCGCACGGTGTTGGG GGTTTTGGGACCCAAGAGTGTGGTGGATTCTGTGACGGGGCATTTGAAGTTGTTGTAG |