Protein ID | Ani_SJS100_1|g8321.t1 |
Gene name | |
Location | scaffold_064:181378..183634 |
Strand | - |
Gene length (bp) | 2256 |
Transcript length (bp) | 1122 |
Coding sequence length (bp) | 1122 |
Protein length (aa) | 374 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 7.8E-27 | 39 | 331 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 65 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 35 | 57 | 22 |
2 | 67 | 89 | 22 |
3 | 116 | 138 | 22 |
4 | 143 | 165 | 22 |
5 | 174 | 196 | 22 |
6 | 225 | 247 | 22 |
7 | 259 | 281 | 22 |
8 | 304 | 326 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8321.t1 MATEKKDIEDVPQQPEYVHDDVFGEISEHGPNFRNVGFIGTVILMMKTQIGLGVLAIPSALEVLGMVPGIICLFV IYCIATWSAYVIGIFKINHRDVYSIDDAGGLMFGPLGRWTLSAAFCLYYVFTSGSAILGLSIGLNAVSTHATCTA VFTAVAAIAGLCFCSIRTLGRITAVAWVGLPCILTAVIIVTVGVGIEDRPADAPKTDSPWVSDWVAVGNPSFADG IAAVSNLLFSFTGIPAFFSIVSEMRDPHQYTKAVVVSQTGVFAVYAIIGGVVYYYCGTYVSSPALGSAGGVVKVI SYAFALPGLLATLTIVAHIPAKFIFVNILRGSRHLTSNSPTHWITWLSSNRNDQGTPGSRSLRTVHKLRKPTG* |
Coding | >Ani_SJS100_1|g8321.t1 ATGGCCACCGAAAAGAAAGACATTGAAGACGTGCCGCAGCAACCCGAATACGTCCATGATGATGTATTCGGAGAG ATCTCGGAGCACGGTCCCAACTTTCGCAATGTCGGGTTCATAGGAACCGTCATCCTCATGATGAAGACGCAGATC GGTTTGGGCGTCCTTGCCATCCCATCTGCTCTGGAAGTCCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTA ATCTACTGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAACCACCGCGATGTCTACAGCATT GACGATGCCGGTGGACTCATGTTTGGCCCTTTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTT TTCACGAGCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTCTACCCATGCAACATGCACGGCA GTCTTCACCGCCGTTGCAGCCATTGCCGGGTTGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTT GCATGGGTGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGGAGTCGGTATAGAGGACCGCCCC GCTGACGCGCCCAAAACGGACAGTCCTTGGGTTTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGA ATTGCAGCTGTATCTAATCTGCTATTCTCCTTTACAGGAATCCCGGCATTCTTTTCCATCGTTTCCGAGATGCGT GACCCCCACCAATATACCAAAGCCGTGGTGGTAAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGA GTGGTGTACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCCGGTGGTGTTGTGAAGGTCATC AGCTACGCATTTGCACTGCCCGGCCTCTTAGCCACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTC GTCAATATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTGGATCACCTGGCTGAGCTCGAAC CGCAATGATCAGGGTACCCCCGGTAGTCGGTCACTCCGAACCGTTCATAAGCTACGAAAACCCACCGGCTAA |
Transcript | >Ani_SJS100_1|g8321.t1 ATGGCCACCGAAAAGAAAGACATTGAAGACGTGCCGCAGCAACCCGAATACGTCCATGATGATGTATTCGGAGAG ATCTCGGAGCACGGTCCCAACTTTCGCAATGTCGGGTTCATAGGAACCGTCATCCTCATGATGAAGACGCAGATC GGTTTGGGCGTCCTTGCCATCCCATCTGCTCTGGAAGTCCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTA ATCTACTGTATCGCTACTTGGTCTGCCTATGTTATTGGCATTTTCAAGATCAACCACCGCGATGTCTACAGCATT GACGATGCCGGTGGACTCATGTTTGGCCCTTTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTACTACGTT TTCACGAGCGGTTCGGCTATTCTTGGACTTTCCATTGGCTTGAACGCCGTGTCTACCCATGCAACATGCACGGCA GTCTTCACCGCCGTTGCAGCCATTGCCGGGTTGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTT GCATGGGTGGGCCTACCATGTATCCTTACAGCCGTGATTATTGTTACTGTCGGAGTCGGTATAGAGGACCGCCCC GCTGACGCGCCCAAAACGGACAGTCCTTGGGTTTCCGACTGGGTAGCCGTCGGCAACCCCAGTTTTGCTGATGGA ATTGCAGCTGTATCTAATCTGCTATTCTCCTTTACAGGAATCCCGGCATTCTTTTCCATCGTTTCCGAGATGCGT GACCCCCACCAATATACCAAAGCCGTGGTGGTAAGTCAGACCGGGGTCTTCGCCGTATATGCCATAATCGGCGGA GTGGTGTACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCCGGTGGTGTTGTGAAGGTCATC AGCTACGCATTTGCACTGCCCGGCCTCTTAGCCACACTCACCATCGTCGCACATATCCCCGCAAAATTCATATTC GTCAATATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGCCCACGCACTGGATCACCTGGCTGAGCTCGAAC CGCAATGATCAGGGTACCCCCGGTAGTCGGTCACTCCGAACCGTTCATAAGCTACGAAAACCCACCGGCTAA |
Gene | >Ani_SJS100_1|g8321.t1 ATGGCCACCGAAAAGAAAGACATTGAAGACGTGCCGCAGCAACCCGAATACGTCCATGATGATGTATTCGGAGAG ATCTCGGAGCACGGTCCCAACTTTCGCAATGTTTATACAAGCAGTTCTCATTGAAAAAAAGTCCCAGAAGCTAAT TGGTTCAACTAGGTCGGGTTCATAGGAACCGTCATCCTCATGATGAAGACGCAGATCGGTTTGGGCGTCCTTGCC ATCCCATCTGCTCTGGAAGTCCTGGGCATGGTCCCGGGCATTATTTGTCTCTTTGTAATCTACTGTATCGCTACT TGGTCTGCCTATGTTATTGGCATTTTCAAGATCAACCACCGCGATGTCTACAGCATTGACGATGCCGGTGGACTC ATGTTTGGCCCTTTGGGCCGGTGGACCCTTTCAGCCGCATTCTGCCTTTGTACGTGGCCCTCATGAACTAGTCGA AGCAATATAATGCTAATGGTAGGAATTGATACCATACAGACTACGTTTTCACGAGCGGTTCGGCTATTCTTGGAC TTTCCATTGGCTTGAACGCCGTGTCTACCCATGCAACATGCACGGCAGTCTTCACCGCCGTTGCAGCCATTGCCG GGTTGTGCTTCTGTAGTATCCGAACATTAGGTCGCATCACTGCGGTTGCATGGGTGGGCCTACCATGTATCCTTA CAGCCGGTACTTTCCCCAGCGATACATCTCCTGCATGATGCACTGACGGTACCTAGTGATTATTGTTACTGTCGG AGTCGGTATAGAGGACCGCCCCGCTGACGCGCCCAAAACGGACAGTCCTTGGGTTTCCGACTGGGTAGCCGTCGG CAACCCCAGTTTTGCTGATGGAATTGCAGCTGTATCTAATCTGCTATTCTCCTTTACAGGAATCCCGGGTGGGTT AATTGCCGTTTTCCTGGCTCTTTTCGGCATCCTATCACACGCTAATATCCATCACCTCCAGCATTCTTTTCCATC GTTTCCGAGATGCGTGACCCCCACCAATATACCAAAGCCGTGGTGGTAAGTCAGACCGGGGTCTTCGCCGTATAT GCCATAATCGGCGGAGTGGTGTACTATTACTGCGGTACCTACGTTTCATCACCGGCCCTTGGTTCAGCCGGTGGT GTTGTGAAGGTCATCAGCTACGCATTTGCACTGCCCGGCCTCTTAGCCACACTCACCATCGTCGCACATGTAAGA GAAACCCAAAGAATCAGAAGAAAAGAAGCCCGATTGGGATATACACCTCAATATGCTAACAAAATCCTCTCGTAA ACCCACCAAAGATCCCCGCAAAATTCATATTCGTCAATATCCTCCGCGGCTCGCGCCATCTCACCAGCAACTCGC CCACGCACTGGATCACCTGGCTGAGCTGTACGTTCGGGATCATCTTAATTGCTTGGATCATTGCCAGCACGATAC CCATCTTTGATGCCTTGGTTTCTCTCATCGGGGCTTTACTTGGTCCGCTTATCTGCATTCAGCCGATGGGTGCGA TGTGGCTGTACGATAACTGGAGGAAGGGGAAGGATGCGGCGCATAAGTCGAAACGGTGGATGTTTATGGTAGTGT GGAGTGTGCTAATAATACTCATTGGGTCATTCATGATGGTTGCGGGAACTTACGGGTCTGTTGAGTACATCATGG CGTCTTATGCCGAGGATGGGGGATCGGCTGCTTTTTCGTGTGCTGATAATTCGAATTCTGTTTGAGTGGATGCGC GTCATGAAGGAGATAGAGTTTGTCTTCGGGAGACGAGATATGTACAGGATACATACCATGAACCATAGATAAAGA TACAAACACTAGAAATGTGCTTATTCTTCGTATGCACCAGGTGTATATTCCAGAAAAACTTTCTCATTGGAAGAT AAAAAAACTATGCTAAACAGGAATGAAAAAAATAAAAAGCAAAATACATACAACAGAAGGGATTCGCTGGTGGTC ACCCACCCAACTACTAACCTCCCGGCGTGTGGCTTGAGTACGGCTGAGCGGACGGGAAGCCCTATTTTCCACACC CTGTGGTCGTATGTACTTATTTATTTTTTGCCAAGATATATATGGCTTCTAAAGTCTAATCGAGAAAAGGCTTCA GATGACCAACCAATACTTGAATAAGCCATAGGCCCTATATCCCACACCAGTCGATCAAATTATACCCCTTCGCCA AAAGCGAACCGCAATGATCAGGGTACCCCCGGTAGTCGGTCACTCCGAACCGTTCATAAGCTACGAAAACCCACC GGCTAA |