Protein ID | Ani_SJS100_1|g8309.t1 |
Gene name | |
Location | scaffold_064:152735..153603 |
Strand | + |
Gene length (bp) | 868 |
Transcript length (bp) | 693 |
Coding sequence length (bp) | 693 |
Protein length (aa) | 231 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 8.5E-22 | 96 | 207 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 50 | 22 |
2 | 63 | 85 | 22 |
3 | 117 | 139 | 22 |
4 | 148 | 170 | 22 |
5 | 185 | 207 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 8488 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8309.t1 MANMTEAIHDYYPSTIDLPHYVTNESSTFSLVAQFAVLWGLALGIASIIIRRPRTPVTQSDQFAFIWMCFTGCIH LFFESYFVVYHKTLAGSHTLFGQLWKEYSLSDSRYLTSDSFLVSMEAVTAFCWGPLAFLIAYCIATQHPARHVLQ LIVSVGQVYGDVLYYATSMFDLYYHEVSFCRPEGYYFWFYYVFMNFIWLAAGSYFAYESAVEITRGMKKLSAMDR KRKDC* |
Coding | >Ani_SJS100_1|g8309.t1 ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCACCGGATGCATACAT CTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCGCT TTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAG CTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCAT GAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCT GCTGGTTCTTATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGG AAGCGGAAGGACTGTTAG |
Transcript | >Ani_SJS100_1|g8309.t1 ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCACCGGATGCATACAT CTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCGCT TTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAG CTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCAT GAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCT GCTGGTTCTTATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGG AAGCGGAAGGACTGTTAG |
Gene | >Ani_SJS100_1|g8309.t1 ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAGTAAGTCGTGTCAT ATTCTCTACTTCTGCATGGAACAATTATTGACGGAGGAAAATCAGCCGGATGCATACATCTATTTTTTGAAAGCT ACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAATATTCCCTTT CTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCGCTGTAAGTCCTTATATCC AACACCCTGACACCTAATCAACTCATCATCAACTAACTTGTATAGTTTTGCTGGGGCCCGCTCGCATTCCTCATT GCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGA GATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTAC TATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCTGCTGGTTCTTGTGAGTTTATCAATACCTTG CTGAGTGGGAACTGTGATTGCTAATCATATTGCAGATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTAT GAAAAAGTTAAGCGCAATGGATCGGAAGCGGAAGGACTGTTAG |