Protein ID | Ani_SJS100_1|g8306.t1 |
Gene name | |
Location | scaffold_064:145230..145543 |
Strand | + |
Gene length (bp) | 313 |
Transcript length (bp) | 255 |
Coding sequence length (bp) | 255 |
Protein length (aa) | 85 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08122 | NDUF_B12 | NADH-ubiquinone oxidoreductase B12 subunit family | 1.1E-27 | 26 | 79 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005739 | mitochondrion | Yes |
GO:0022900 | electron transport chain | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0008150 | biological_process | No |
GO:0008152 | metabolic process | No |
GO:0043227 | membrane-bounded organelle | No |
GO:0009987 | cellular process | No |
GO:0044237 | cellular metabolic process | No |
GO:0006091 | generation of precursor metabolites and energy | No |
GO:0043226 | organelle | No |
GO:0043231 | intracellular membrane-bounded organelle | No |
GO:0005575 | cellular_component | No |
GO:0043229 | intracellular organelle | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 50 | 72 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 8485 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8306.t1 MAPNPTGFDINEFKAAAHPRSAWAKKDPWARYEAWRYTGPFSRFNRFKRIFPGFGIASVAFAGYCAYEHFFLKDD HHHHGEGHH* |
Coding | >Ani_SJS100_1|g8306.t1 ATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAG AAGGACCCCTGGGCTCGCTACGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATC TTCCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACGAGCACTTCTTCCTCAAGGATGAT CACCACCACCACGGCGAGGGCCACCACTAA |
Transcript | >Ani_SJS100_1|g8306.t1 ATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAG AAGGACCCCTGGGCTCGCTACGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATC TTCCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACGAGCACTTCTTCCTCAAGGATGAT CACCACCACCACGGCGAGGGCCACCACTAA |
Gene | >Ani_SJS100_1|g8306.t1 ATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAG AAGGACCCCTGGGCTCGCTAGTACGATACTATCCACGACCTACTTGGCTATTTCACGTTGTACTAACAGTTCGAC CAGCGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATCTTCCCTGGCTTCGGCAT TGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACGAGCACTTCTTCCTCAAGGATGATCACCACCACCACGGCGA GGGCCACCACTAA |