Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8306.t1
Gene name
Locationscaffold_064:145230..145543
Strand+
Gene length (bp)313
Transcript length (bp)255
Coding sequence length (bp)255
Protein length (aa) 85

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08122 NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit family 1.1E-27 26 79

GO

GO Term Description Terminal node
GO:0005739 mitochondrion Yes
GO:0022900 electron transport chain Yes
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0043227 membrane-bounded organelle No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0006091 generation of precursor metabolites and energy No
GO:0043226 organelle No
GO:0043231 intracellular membrane-bounded organelle No
GO:0005575 cellular_component No
GO:0043229 intracellular organelle No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 50 72 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup8485
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g1680.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g9553.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g3214.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g197.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g3502.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g782.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g10460.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g1390.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g779.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g510.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g650.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g5036.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g1737.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g310.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g1967.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g1377.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g2962.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g4381.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g1962.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g8306.t1 (this protein)
Aspergillus niger CBS 147371 Ani_SJS27_1|g1548.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g1196.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g5058.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g5199.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8306.t1
MAPNPTGFDINEFKAAAHPRSAWAKKDPWARYEAWRYTGPFSRFNRFKRIFPGFGIASVAFAGYCAYEHFFLKDD
HHHHGEGHH*
Coding >Ani_SJS100_1|g8306.t1
ATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAG
AAGGACCCCTGGGCTCGCTACGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATC
TTCCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACGAGCACTTCTTCCTCAAGGATGAT
CACCACCACCACGGCGAGGGCCACCACTAA
Transcript >Ani_SJS100_1|g8306.t1
ATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAG
AAGGACCCCTGGGCTCGCTACGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATC
TTCCCTGGCTTCGGCATTGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACGAGCACTTCTTCCTCAAGGATGAT
CACCACCACCACGGCGAGGGCCACCACTAA
Gene >Ani_SJS100_1|g8306.t1
ATGGCTCCCAACCCCACCGGATTTGACATCAACGAATTCAAGGCCGCCGCCCACCCTCGGTCGGCCTGGGCCAAG
AAGGACCCCTGGGCTCGCTAGTACGATACTATCCACGACCTACTTGGCTATTTCACGTTGTACTAACAGTTCGAC
CAGCGAGGCCTGGAGATACACCGGTCCTTTCAGCCGCTTCAACCGTTTCAAGCGCATCTTCCCTGGCTTCGGCAT
TGCCAGCGTTGCTTTCGCCGGCTACTGCGCCTACGAGCACTTCTTCCTCAAGGATGATCACCACCACCACGGCGA
GGGCCACCACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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