© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g827.t1 |
| Gene name | |
| Location | scaffold_003:55951..56992 |
| Strand | + |
| Gene length (bp) | 1041 |
| Transcript length (bp) | 1041 |
| Coding sequence length (bp) | 1041 |
| Protein length (aa) | 347 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 2.0E-26 | 175 | 302 |
| PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 9.6E-20 | 207 | 338 |
| PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 7.9E-08 | 31 | 132 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 255 | 277 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g827.t1 MQQMKAVRAVTAGGNKLMTELREEPLPSPGQHEVLIRVHAVSLNYRDAVLLRGDFPVNSKEEVIPVSDGAGEVIA VGPGVKRVKPNVRVAVGCFTTWIGGPFIPEYFRTSAGFSIDGMLAEYVLFHENALVHIPDYMSYAEAASLPCAAV TAWTALNKIEPLQPGQTVLIQGTGGVSLFALQIAKIYGARVLAITSSDTKAARLKALGADAVVNYNTSPDWDREI LTLTDGKGVDRTLDIAGEKTIQKAAACTKIGGVIILIGFASGLGGGIPPIDIMARTLTLTGSIIGSRLDFETMLA AMVRHEMRPVIDQVYPFAEYKEAYQRLESGQQVGKVVIEIVNQTAD* |
| Coding | >Ani_SJS100_1|g827.t1 ATGCAGCAAATGAAAGCAGTCCGCGCTGTTACCGCAGGAGGTAATAAGCTTATGACCGAGCTTCGTGAGGAACCT TTGCCCAGCCCAGGTCAACACGAAGTTTTGATCCGGGTTCACGCCGTCTCACTCAACTACCGAGATGCAGTGCTA CTGCGAGGCGACTTTCCTGTCAATAGCAAGGAGGAGGTGATTCCTGTTTCCGACGGCGCCGGCGAGGTTATCGCG GTCGGGCCAGGAGTAAAACGGGTTAAACCCAATGTTCGGGTTGCAGTCGGTTGTTTTACAACCTGGATTGGCGGC CCATTTATTCCAGAATATTTCCGCACGAGCGCTGGGTTTAGCATCGATGGAATGCTCGCAGAGTACGTGCTCTTT CATGAAAATGCACTTGTACACATTCCCGATTATATGTCCTATGCTGAAGCTGCTTCGCTTCCCTGTGCAGCAGTC ACAGCGTGGACAGCACTGAATAAAATTGAGCCTCTTCAGCCTGGCCAGACAGTACTGATTCAGGGAACCGGGGGC GTTTCACTATTCGCGTTACAGATTGCGAAGATCTATGGCGCTCGTGTGCTGGCTATTACCTCGTCTGATACCAAA GCTGCTAGGCTGAAGGCACTCGGTGCAGATGCTGTAGTAAACTACAACACTTCTCCAGACTGGGATCGCGAGATC TTGACTCTAACTGATGGCAAGGGGGTGGACAGGACCCTTGATATTGCTGGAGAGAAGACTATTCAGAAAGCCGCG GCATGCACCAAGATAGGTGGTGTAATTATTCTAATCGGCTTTGCAAGTGGTCTTGGTGGCGGTATCCCGCCTATT GATATCATGGCTCGGACCCTGACGTTGACTGGATCAATTATCGGGTCACGACTAGATTTTGAGACAATGCTTGCG GCAATGGTAAGACATGAGATGAGGCCGGTTATTGATCAGGTGTACCCCTTTGCGGAATACAAGGAGGCTTATCAA AGACTGGAGAGCGGACAGCAGGTTGGCAAAGTTGTTATTGAAATTGTTAATCAGACTGCTGATTAG |
| Transcript | >Ani_SJS100_1|g827.t1 ATGCAGCAAATGAAAGCAGTCCGCGCTGTTACCGCAGGAGGTAATAAGCTTATGACCGAGCTTCGTGAGGAACCT TTGCCCAGCCCAGGTCAACACGAAGTTTTGATCCGGGTTCACGCCGTCTCACTCAACTACCGAGATGCAGTGCTA CTGCGAGGCGACTTTCCTGTCAATAGCAAGGAGGAGGTGATTCCTGTTTCCGACGGCGCCGGCGAGGTTATCGCG GTCGGGCCAGGAGTAAAACGGGTTAAACCCAATGTTCGGGTTGCAGTCGGTTGTTTTACAACCTGGATTGGCGGC CCATTTATTCCAGAATATTTCCGCACGAGCGCTGGGTTTAGCATCGATGGAATGCTCGCAGAGTACGTGCTCTTT CATGAAAATGCACTTGTACACATTCCCGATTATATGTCCTATGCTGAAGCTGCTTCGCTTCCCTGTGCAGCAGTC ACAGCGTGGACAGCACTGAATAAAATTGAGCCTCTTCAGCCTGGCCAGACAGTACTGATTCAGGGAACCGGGGGC GTTTCACTATTCGCGTTACAGATTGCGAAGATCTATGGCGCTCGTGTGCTGGCTATTACCTCGTCTGATACCAAA GCTGCTAGGCTGAAGGCACTCGGTGCAGATGCTGTAGTAAACTACAACACTTCTCCAGACTGGGATCGCGAGATC TTGACTCTAACTGATGGCAAGGGGGTGGACAGGACCCTTGATATTGCTGGAGAGAAGACTATTCAGAAAGCCGCG GCATGCACCAAGATAGGTGGTGTAATTATTCTAATCGGCTTTGCAAGTGGTCTTGGTGGCGGTATCCCGCCTATT GATATCATGGCTCGGACCCTGACGTTGACTGGATCAATTATCGGGTCACGACTAGATTTTGAGACAATGCTTGCG GCAATGGTAAGACATGAGATGAGGCCGGTTATTGATCAGGTGTACCCCTTTGCGGAATACAAGGAGGCTTATCAA AGACTGGAGAGCGGACAGCAGGTTGGCAAAGTTGTTATTGAAATTGTTAATCAGACTGCTGATTAG |
| Gene | >Ani_SJS100_1|g827.t1 ATGCAGCAAATGAAAGCAGTCCGCGCTGTTACCGCAGGAGGTAATAAGCTTATGACCGAGCTTCGTGAGGAACCT TTGCCCAGCCCAGGTCAACACGAAGTTTTGATCCGGGTTCACGCCGTCTCACTCAACTACCGAGATGCAGTGCTA CTGCGAGGCGACTTTCCTGTCAATAGCAAGGAGGAGGTGATTCCTGTTTCCGACGGCGCCGGCGAGGTTATCGCG GTCGGGCCAGGAGTAAAACGGGTTAAACCCAATGTTCGGGTTGCAGTCGGTTGTTTTACAACCTGGATTGGCGGC CCATTTATTCCAGAATATTTCCGCACGAGCGCTGGGTTTAGCATCGATGGAATGCTCGCAGAGTACGTGCTCTTT CATGAAAATGCACTTGTACACATTCCCGATTATATGTCCTATGCTGAAGCTGCTTCGCTTCCCTGTGCAGCAGTC ACAGCGTGGACAGCACTGAATAAAATTGAGCCTCTTCAGCCTGGCCAGACAGTACTGATTCAGGGAACCGGGGGC GTTTCACTATTCGCGTTACAGATTGCGAAGATCTATGGCGCTCGTGTGCTGGCTATTACCTCGTCTGATACCAAA GCTGCTAGGCTGAAGGCACTCGGTGCAGATGCTGTAGTAAACTACAACACTTCTCCAGACTGGGATCGCGAGATC TTGACTCTAACTGATGGCAAGGGGGTGGACAGGACCCTTGATATTGCTGGAGAGAAGACTATTCAGAAAGCCGCG GCATGCACCAAGATAGGTGGTGTAATTATTCTAATCGGCTTTGCAAGTGGTCTTGGTGGCGGTATCCCGCCTATT GATATCATGGCTCGGACCCTGACGTTGACTGGATCAATTATCGGGTCACGACTAGATTTTGAGACAATGCTTGCG GCAATGGTAAGACATGAGATGAGGCCGGTTATTGATCAGGTGTACCCCTTTGCGGAATACAAGGAGGCTTATCAA AGACTGGAGAGCGGACAGCAGGTTGGCAAAGTTGTTATTGAAATTGTTAATCAGACTGCTGATTAG |