Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8265.t1
Gene name
Locationscaffold_064:8468..10014
Strand-
Gene length (bp)1546
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 18 40 22
2 53 75 22
3 121 143 22
4 150 172 22
5 182 204 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8265.t1
MLSRSLGKGTSFTGQQTTVLGIGVAFMAFTSVVIALRVYVRTLLLRAWGADDVLMVIGTILTYGLSIASIVAAYY
GVGKHYSDVHIEDRIPMFKASYNTNTEEDDDPLTITSQKFYEVNGILVIVMDILIWAVPIPMLWRVRISLRKKIA
VLGVFSVGLLSIAAACVRYNTVLQLANNPDETYVLAASLNWCGIEAYVAIFCGSTPALYVFVKRYLPQILGPSYA
HNPTYPGQSNAKRFSAPFCRVSRQDVSESRLGESQDALHDGDGIMLKTDIRWEVTDIDAEGRVDSHHVNI*
Coding >Ani_SJS100_1|g8265.t1
ATGCTGTCGCGATCGCTGGGAAAGGGAACGTCCTTCACAGGGCAGCAAACGACAGTGCTTGGAATTGGAGTAGCA
TTTATGGCATTTACCTCCGTTGTAATTGCCCTTCGCGTCTATGTAAGAACGCTTTTGCTGCGTGCGTGGGGTGCT
GATGACGTGCTCATGGTGATCGGAACGATACTTACATACGGTCTTTCTATCGCCTCAATTGTGGCTGCATACTAT
GGGGTTGGAAAACACTATTCAGATGTTCATATTGAAGACCGGATTCCTATGTTCAAGGCAAGTTATAACACTAAT
ACCGAGGAAGACGACGACCCACTGACTATAACCAGTCAGAAGTTCTACGAGGTCAATGGCATCCTCGTCATTGTC
ATGGATATTCTCATCTGGGCTGTTCCCATTCCGATGCTATGGCGTGTTCGTATCTCTTTGCGCAAGAAGATTGCA
GTACTGGGAGTTTTCAGCGTGGGCCTTCTGTCTATAGCTGCTGCTTGCGTGAGATACAACACCGTCTTGCAACTA
GCCAACAATCCAGATGAAACATACGTCCTCGCTGCCTCGCTTAACTGGTGTGGCATCGAAGCCTACGTCGCCATA
TTCTGTGGCTCCACTCCGGCATTATATGTCTTTGTGAAGCGTTACCTCCCACAAATTCTGGGCCCCTCCTACGCG
CACAATCCAACTTACCCGGGACAGAGCAATGCAAAGAGATTCAGCGCACCTTTCTGCAGAGTGTCCCGTCAAGAT
GTGAGCGAAAGCCGGCTAGGAGAGAGCCAAGATGCATTACATGATGGGGATGGCATTATGCTTAAGACAGACATT
CGCTGGGAGGTCACTGATATAGATGCGGAAGGTCGAGTGGACTCGCACCATGTAAATATATGA
Transcript >Ani_SJS100_1|g8265.t1
ATGCTGTCGCGATCGCTGGGAAAGGGAACGTCCTTCACAGGGCAGCAAACGACAGTGCTTGGAATTGGAGTAGCA
TTTATGGCATTTACCTCCGTTGTAATTGCCCTTCGCGTCTATGTAAGAACGCTTTTGCTGCGTGCGTGGGGTGCT
GATGACGTGCTCATGGTGATCGGAACGATACTTACATACGGTCTTTCTATCGCCTCAATTGTGGCTGCATACTAT
GGGGTTGGAAAACACTATTCAGATGTTCATATTGAAGACCGGATTCCTATGTTCAAGGCAAGTTATAACACTAAT
ACCGAGGAAGACGACGACCCACTGACTATAACCAGTCAGAAGTTCTACGAGGTCAATGGCATCCTCGTCATTGTC
ATGGATATTCTCATCTGGGCTGTTCCCATTCCGATGCTATGGCGTGTTCGTATCTCTTTGCGCAAGAAGATTGCA
GTACTGGGAGTTTTCAGCGTGGGCCTTCTGTCTATAGCTGCTGCTTGCGTGAGATACAACACCGTCTTGCAACTA
GCCAACAATCCAGATGAAACATACGTCCTCGCTGCCTCGCTTAACTGGTGTGGCATCGAAGCCTACGTCGCCATA
TTCTGTGGCTCCACTCCGGCATTATATGTCTTTGTGAAGCGTTACCTCCCACAAATTCTGGGCCCCTCCTACGCG
CACAATCCAACTTACCCGGGACAGAGCAATGCAAAGAGATTCAGCGCACCTTTCTGCAGAGTGTCCCGTCAAGAT
GTGAGCGAAAGCCGGCTAGGAGAGAGCCAAGATGCATTACATGATGGGGATGGCATTATGCTTAAGACAGACATT
CGCTGGGAGGTCACTGATATAGATGCGGAAGGTCGAGTGGACTCGCACCATGTAAATATATGA
Gene >Ani_SJS100_1|g8265.t1
ATGCTGTCGCGATCGCTGGGAAAGGGAACGTCCTTCACAGGGCAGCAAACGACAGTGCTTGGAATTGGAGTAGCA
TTTATGGCATTTACCTCCGTTGTAATTGCCCTTCGCGTCTATGTAAGAACGCTTTTGCTGCGTGCGTGGGGTGCT
GATGACGGTGAGCCGACTATTGTACCTAGGTCCTTTGATAAATCTAACGAACATGCAGTGCTCATGGTGATCGGA
ACGGTAAGCCAGATAGTACCATTTCGATGTTCCGTCAAGTTGTTGACCTCGGGGTCAGATACTTACATACGGTCT
TTCTATCGCCTCAATTGTGGGTAGGTCCAGGCACGTACATACGTCTTAAGTAATTGAGTTACTGACCGTGGCAGC
TGCATACTATGGGGTTGGAAAACACTGTACGTCTTCTACTGATTTGCTTGACTTGACGTCTTCTAATGTGAACCA
AGATTCAGATGTTCATATTGAAGACCGGATTCCTATGTTCAAGGCAAGTTATAACACTAATACCGAGGAAGACGA
CGACCCACTGACTATAACCAGTGTATATGGGCTATACGCCTCCTCTACGTGCTCGGCCTGTGCTTCATCAAGCTA
TCACTTCTTTGGTTTTATCTCCGGCTGGAAACACGACGTTTTATGCAATGGCTTGTGTACTCGGTCATCTTCATC
GTTCTAGGGGTATCAATCTCAAGCTTCTTCGTTGATACACTCTCCTGCATACCTCCTTCTAAATTTTGGAATTCT
ACCAAGTCCGGACATTGTATGTCAACGGCGTCCCAGCAGAAGTTCTACGAGGTCAATGGCATCCTCGTCATTGTC
ATGGATATTCTCATCTGGGCTGTTCCCATTCCGATGCTATGGCGTGTTCGTATCTCTTTGGTAAGTACAAAGATA
CCATTTCCAATTCTTTGCCACCTCTTGATTAACATCTTACAGCGCAAGAAGATTGCAGTACTGGGAGTTTTCAGC
GTGGGCCTTCTGTCTATAGCTGGTAGGTTGCTCATTACATTATCCGTGCCTTTTTGTTTATTTCTCTTTCGTCTC
TTTTTTCCCCTTAAAACAGTTTCGGATTAACCAATGCAGCTGCTTGCGTGAGATACAACACCGTCTTGCAACTAG
CCAACAATCCAGATGAAACATACGTCCTCGCTGCCTCGCTTAACTGGTGTGGCATCGAAGCCTACGTCGGTACGT
ACCATTTTTCCTCCCCGACACGTCAGGCTTCGTACTAATGGATCATCCCGTAGCCATATTCTGTGGCTCCACTCC
GGCATTATATGTCTTTGTGAAGCGTTACCTCCCACAAATTCTGGGCCCCTCCTACGCGCACAATCCAACTTACCC
GGGACAGAGCAATGCAAAGAGATTCAGCGCACCTTTCTGCAGAGTGTCCCGTCAAGATGTGAGCGAAAGCCGGCT
AGGAGAGAGCCAAGATGCATTACATGATGGGGATGGCATTATGCTTAAGACAGACATTCGCTGGGAGGTCACTGA
TATAGATGCGGAAGGTCGAGTGGACTCGCACCATGTAAATATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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