© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8182.t1 |
| Gene name | |
| Location | scaffold_062:91499..93045 |
| Strand | + |
| Gene length (bp) | 1546 |
| Transcript length (bp) | 1323 |
| Coding sequence length (bp) | 1323 |
| Protein length (aa) | 441 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01529 | DHHC | DHHC palmitoyltransferase | 1.7E-28 | 166 | 285 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016409 | palmitoyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 53 | 75 | 22 |
| 3 | 212 | 234 | 22 |
| 4 | 247 | 269 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8182.t1 MARPDRRVNLAVARAIPPFLLCVCVYACYIVTKPLCIDYLIRPLPKYSHGRRVGAGIAILVIFYILILVVIITYL RLLFNITRNPGFLPRAPAPTKEEQETEPSDRPPRRKRKHRRTRTAEKPDKTDVDIERGADGNADSGAIPLDIIGL ESFYTKDVFVCQEDGRPLYCSTCSRYKPDRAHHCREVDRCVLKMDHFCPWVGGVVSETSFKFFIQFVFYTLIFCA FSLIICATFTAEIIQDAGGANVHLAIGIGLSSLFGLFSFGMTISSLQLAMWNLSTIENLNRRSAVWTLAIRVPDR MLARLNPESRWAPTFRTITYPLPPVPLSPEAARDYQPPEKQHVFAILQTLPGENPFDLGSRFKNLQQVLGYSIID WFLPLRQSPCADRTTRDSFYELGPVVSRLKKEAGLDPPPESQPTTQNDTERKHKRRRSSHRRSQG* |
| Coding | >Ani_SJS100_1|g8182.t1 ATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTGTGTGTATGTGTA TATGCATGCTATATTGTCACAAAGCCGTTATGCATTGACTACCTGATCCGCCCTCTCCCAAAATATTCCCACGGC CGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTATTATAACCTATCTC CGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAG ACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGAGAAGCCGGATAAG ACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATATTATTGGCTTG GAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTCGACATGTTCTCGC TACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCTTGG GTAGGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAGTTCGTGTTTTATACTCTGATATTTTGCGCA TTCAGTTTGATAATATGCGCAACCTTCACGGCAGAGATTATTCAAGATGCTGGCGGAGCCAATGTTCATCTGGCT ATCGGTATTGGATTGAGCTCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCTTGCGATG TGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTGCCAGATCGT ATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCCACCTGTG CCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTCCAAACCCTG CCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCATCATCGAC TGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTAGGACCGGTA GTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGACACAGAA AGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAGGGTGA |
| Transcript | >Ani_SJS100_1|g8182.t1 ATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTGTGTGTATGTGTA TATGCATGCTATATTGTCACAAAGCCGTTATGCATTGACTACCTGATCCGCCCTCTCCCAAAATATTCCCACGGC CGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTATTATAACCTATCTC CGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAG ACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGAGAAGCCGGATAAG ACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATATTATTGGCTTG GAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTCGACATGTTCTCGC TACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCTTGG GTAGGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAGTTCGTGTTTTATACTCTGATATTTTGCGCA TTCAGTTTGATAATATGCGCAACCTTCACGGCAGAGATTATTCAAGATGCTGGCGGAGCCAATGTTCATCTGGCT ATCGGTATTGGATTGAGCTCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCTTGCGATG TGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTGCCAGATCGT ATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCCACCTGTG CCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTCCAAACCCTG CCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCATCATCGAC TGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTAGGACCGGTA GTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGACACAGAA AGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAGGGTGA |
| Gene | >Ani_SJS100_1|g8182.t1 ATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTGTGTGTATGTGTA TATGCATGCTATATTGTCACAAAGCCGTTATGCAGTAAGTGCCCCCTGAGCCAATGGCTTACTTCCGCCGCTAAT TGTCCGAATTAGTTGACTACCTGATCCGCCCTCTCCCAAAATATTCCCACGGCCGTCGAGTTGGCGCTGGCATAG CCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGTTCAATATCACCC GCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAGACGGAACCATCGGACCGCCCTC CACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTGATATTGAAAGAG GTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATATTATTGGCTTGGAGAGTTTCTATACAAAAGATG TTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTGATAGAGCACATC ACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCTTGGTGAGTTCCTCTTCCTCAGTGAT CACTGGACCGGACTGTCATTAACATTTGATCAGGGTAGGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTAT ACAGTTCGTGTTTTATACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACCTTCACGGCAGAGATTAT TCAAGATGTGAGAAAATGTCTTTCAAGCTCTCTGGTCTGTAGACTAACCGTTTTCTTTTGCATAGGCTGGCGGAG CCAATGTTCATCTGGCTATCGGTATTGGATTGTAAGTATTTTCAACGTATGCTTCAGGTTTACCGATCGCCTTCT AACGATCAGTAGGAGCTCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCTTGCGATGTG GAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTGCCAGATCGTAT GCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCCACCTGTGCC TCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTCCAAACCCTGCC TGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCATCATCGACTG GTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTAGGACCGGTAGT GTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGACACAGAAAG AAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAGGGTGA |