Protein ID | Ani_SJS100_1|g8166.t1 |
Gene name | |
Location | scaffold_062:37981..40010 |
Strand | - |
Gene length (bp) | 2029 |
Transcript length (bp) | 1971 |
Coding sequence length (bp) | 1971 |
Protein length (aa) | 657 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03815 | LCCL | LCCL domain | 3.9E-23 | 166 | 287 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 130 | 152 | 22 |
2 | 323 | 345 | 22 |
3 | 360 | 382 | 22 |
4 | 432 | 454 | 22 |
5 | 464 | 486 | 22 |
6 | 507 | 529 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8166.t1 MRPEHPSRSRSRSPSSSFGKTSQDYPLAVFDPNENDSESSQFITVGRESTDSARPDRRENTNEPLLPTSTHHPRR IAAARPFTCTLSGIRAWIKGPPHPHRYQITPWLQRWQTAPGRLVERYFPSTRAKVWLLLACICTWGVIFLSILHS SVAGQQVSGYGVPVKLSCNARLWPNSTDCGLNGDSCRPFDDGAFAFRCPASCADAMLLEPYFVGPEEYNYRPLVI GGTAEGDSTEGIYRGDSAICPAALHAGLIDSQKGGCGVLRRTGERTNFPSAASNGIESIGYASYFPLSFTFSGEP SETSCQDLRWPLFTFSVVVTTLLSLFITSPAAFYASIYFIVYFQVALSSDPPYSPDYYEVVSTALGRFLPCAFVG FAIYYFCVRKTLTDLTAHWDKTVLWLGSCWVGALNTDTFDKIPISRLTPHDIQQQPGAIPALIIIIGLLVAIVLT QAIAFRREGRMPKMLLLYGIMACGVIALMLVPHMNLRIHHYVLSLLFLPGTTLQTRPSLLYQGLLVGLFINGIAR WGFDSILQTSAALLDGAQLGSVLPVIGAPVMMSRQNIMFNFNDVDKDADGISVLVNDVERFRAFKSDDGMLESFN WTRHLEGEPEYFRFGYIKVNALGGIWYEDFTRPGTWEGEGQWIPLDSDSRSSMESI* |
Coding | >Ani_SJS100_1|g8166.t1 ATGCGCCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTCCTTTGGAAAGACATCCCAAGACTAC CCGTTGGCAGTCTTTGATCCGAATGAGAATGACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACC GACTCCGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCCAACTTCAACTCATCATCCCCGTCGC ATAGCGGCGGCGAGGCCATTTACATGTACGCTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACAC CGGTATCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCGCCTTGTGGAGCGCTATTTTCCGAGC ACTCGTGCCAAAGTTTGGCTTTTGTTGGCCTGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCC TCTGTAGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATCGTGTAACGCTAGACTATGGCCAAAC TCGACCGACTGCGGTCTGAATGGTGACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCTGTCCCGCA AGTTGCGCAGATGCGATGCTGCTAGAGCCGTATTTTGTAGGCCCCGAGGAGTACAACTATCGTCCTCTTGTCATC GGGGGCACTGCAGAAGGTGATAGTACTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGGCACTACAC GCTGGTCTGATAGATAGCCAAAAAGGCGGCTGTGGTGTCTTGCGTCGAACGGGTGAAAGAACCAATTTTCCATCA GCGGCAAGTAACGGCATCGAAAGCATTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCGGAGAGCCA TCTGAAACAAGCTGCCAGGACCTCCGCTGGCCACTTTTCACCTTCTCAGTCGTTGTAACAACCCTGCTATCCCTA TTTATCACGTCTCCCGCAGCATTCTATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCTCCTCCGAC CCGCCTTACTCCCCAGACTACTATGAAGTCGTATCTACAGCCCTAGGCCGCTTCCTCCCCTGCGCCTTCGTCGGC TTTGCAATTTACTACTTTTGCGTCCGCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCGTCCTCTGG CTCGGCAGCTGCTGGGTCGGCGCCCTCAACACCGACACATTCGACAAAATTCCCATCTCACGCCTCACACCTCAC GACATCCAACAACAACCAGGCGCCATCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTGTTCTCACC CAAGCCATCGCTTTCCGCAGAGAAGGCCGCATGCCCAAAATGCTTCTCCTCTATGGAATCATGGCCTGCGGCGTG ATCGCCCTGATGCTCGTCCCGCACATGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCTTACCGGGG ACAACACTCCAAACGCGCCCCAGTCTCCTATACCAAGGCCTCCTGGTAGGACTGTTCATCAACGGCATCGCCCGC TGGGGCTTCGATAGCATTCTGCAGACGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCCTGCCTGTC ATTGGGGCTCCTGTTATGATGTCACGTCAGAACATCATGTTCAATTTCAATGATGTAGACAAAGATGCAGATGGG ATTAGCGTGCTTGTTAATGATGTCGAACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGTCGTTTAAT TGGACCCGCCATTTGGAAGGTGAGCCGGAGTATTTCCGGTTTGGGTACATTAAAGTTAATGCGTTGGGAGGAATT TGGTATGAGGATTTTACGAGGCCGGGGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTGATTCTCGG TCGTCTATGGAATCTATCTAG |
Transcript | >Ani_SJS100_1|g8166.t1 ATGCGCCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTCCTTTGGAAAGACATCCCAAGACTAC CCGTTGGCAGTCTTTGATCCGAATGAGAATGACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACC GACTCCGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCCAACTTCAACTCATCATCCCCGTCGC ATAGCGGCGGCGAGGCCATTTACATGTACGCTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACAC CGGTATCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCGCCTTGTGGAGCGCTATTTTCCGAGC ACTCGTGCCAAAGTTTGGCTTTTGTTGGCCTGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCC TCTGTAGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATCGTGTAACGCTAGACTATGGCCAAAC TCGACCGACTGCGGTCTGAATGGTGACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCTGTCCCGCA AGTTGCGCAGATGCGATGCTGCTAGAGCCGTATTTTGTAGGCCCCGAGGAGTACAACTATCGTCCTCTTGTCATC GGGGGCACTGCAGAAGGTGATAGTACTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGGCACTACAC GCTGGTCTGATAGATAGCCAAAAAGGCGGCTGTGGTGTCTTGCGTCGAACGGGTGAAAGAACCAATTTTCCATCA GCGGCAAGTAACGGCATCGAAAGCATTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCGGAGAGCCA TCTGAAACAAGCTGCCAGGACCTCCGCTGGCCACTTTTCACCTTCTCAGTCGTTGTAACAACCCTGCTATCCCTA TTTATCACGTCTCCCGCAGCATTCTATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCTCCTCCGAC CCGCCTTACTCCCCAGACTACTATGAAGTCGTATCTACAGCCCTAGGCCGCTTCCTCCCCTGCGCCTTCGTCGGC TTTGCAATTTACTACTTTTGCGTCCGCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCGTCCTCTGG CTCGGCAGCTGCTGGGTCGGCGCCCTCAACACCGACACATTCGACAAAATTCCCATCTCACGCCTCACACCTCAC GACATCCAACAACAACCAGGCGCCATCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTGTTCTCACC CAAGCCATCGCTTTCCGCAGAGAAGGCCGCATGCCCAAAATGCTTCTCCTCTATGGAATCATGGCCTGCGGCGTG ATCGCCCTGATGCTCGTCCCGCACATGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCTTACCGGGG ACAACACTCCAAACGCGCCCCAGTCTCCTATACCAAGGCCTCCTGGTAGGACTGTTCATCAACGGCATCGCCCGC TGGGGCTTCGATAGCATTCTGCAGACGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCCTGCCTGTC ATTGGGGCTCCTGTTATGATGTCACGTCAGAACATCATGTTCAATTTCAATGATGTAGACAAAGATGCAGATGGG ATTAGCGTGCTTGTTAATGATGTCGAACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGTCGTTTAAT TGGACCCGCCATTTGGAAGGTGAGCCGGAGTATTTCCGGTTTGGGTACATTAAAGTTAATGCGTTGGGAGGAATT TGGTATGAGGATTTTACGAGGCCGGGGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTGATTCTCGG TCGTCTATGGAATCTATCTAG |
Gene | >Ani_SJS100_1|g8166.t1 ATGCGCCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTCCTTTGGAAAGACATCCCAAGACTAC CCGTTGGCAGTCTTTGATCCGAATGAGAATGACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACC GACTCCGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCCAACTTCAACTCATCATCCCCGTCGC ATAGCGGCGGCGAGGCCATTTACATGTACGCTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACAC CGGTATCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCGCCTTGTGGAGCGCTATTTTCCGAGC ACTCGTGCCAAAGTTTGGCTTTTGTTGGCCTGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCC TCTGTAGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATCGTGTAACGCTAGACTATGGTATGTG ACCTGTGCTCTGGCGGTTCCAAACTGTTCCCAAATTAATCTCTTTATGCAGGCCAAACTCGACCGACTGCGGTCT GAATGGTGACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCTGTCCCGCAAGTTGCGCAGATGCGAT GCTGCTAGAGCCGTATTTTGTAGGCCCCGAGGAGTACAACTATCGTCCTCTTGTCATCGGGGGCACTGCAGAAGG TGATAGTACTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGGCACTACACGCTGGTCTGATAGATAG CCAAAAAGGCGGCTGTGGTGTCTTGCGTCGAACGGGTGAAAGAACCAATTTTCCATCAGCGGCAAGTAACGGCAT CGAAAGCATTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCGGAGAGCCATCTGAAACAAGCTGCCA GGACCTCCGCTGGCCACTTTTCACCTTCTCAGTCGTTGTAACAACCCTGCTATCCCTATTTATCACGTCTCCCGC AGCATTCTATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCTCCTCCGACCCGCCTTACTCCCCAGA CTACTATGAAGTCGTATCTACAGCCCTAGGCCGCTTCCTCCCCTGCGCCTTCGTCGGCTTTGCAATTTACTACTT TTGCGTCCGCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCGTCCTCTGGCTCGGCAGCTGCTGGGT CGGCGCCCTCAACACCGACACATTCGACAAAATTCCCATCTCACGCCTCACACCTCACGACATCCAACAACAACC AGGCGCCATCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTGTTCTCACCCAAGCCATCGCTTTCCG CAGAGAAGGCCGCATGCCCAAAATGCTTCTCCTCTATGGAATCATGGCCTGCGGCGTGATCGCCCTGATGCTCGT CCCGCACATGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCTTACCGGGGACAACACTCCAAACGCG CCCCAGTCTCCTATACCAAGGCCTCCTGGTAGGACTGTTCATCAACGGCATCGCCCGCTGGGGCTTCGATAGCAT TCTGCAGACGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCCTGCCTGTCATTGGGGCTCCTGTTAT GATGTCACGTCAGAACATCATGTTCAATTTCAATGATGTAGACAAAGATGCAGATGGGATTAGCGTGCTTGTTAA TGATGTCGAACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGTCGTTTAATTGGACCCGCCATTTGGA AGGTGAGCCGGAGTATTTCCGGTTTGGGTACATTAAAGTTAATGCGTTGGGAGGAATTTGGTATGAGGATTTTAC GAGGCCGGGGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTGATTCTCGGTCGTCTATGGAATCTAT CTAG |