© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g8165.t1 |
| Gene name | |
| Location | scaffold_062:34979..36248 |
| Strand | + |
| Gene length (bp) | 1269 |
| Transcript length (bp) | 1215 |
| Coding sequence length (bp) | 1215 |
| Protein length (aa) | 405 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04616 | Glyco_hydro_43 | Glycosyl hydrolases family 43 | 2.4E-28 | 109 | 368 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003674 | molecular_function | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 60 | 82 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH43_30 | 2.8E-92 | 109 | 389 |
| Orthofinder run ID | 3 |
| Orthogroup | 8381 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8165.t1 MKGLPSLLNSSSTKKWTQSTPSTGEGENESGSTISPTKPPEPSTPPGGSNTSMIWTRKKIIWLITLIALSVAIIV VVITVPVVLLLDDKHNDDPSYYNSANRPVRVVHDFPDPGLIQVNSTWYAYATVATPDNPDVPHVPVSTSRNFSSW TWLQGYDVMPAISSWETNMNQYAPDVIQRKDGHFVLYYSGELKDWLRHHCVGAAVSNGTSPLGPYIPHNTTLACP RDHGGAIDPAPFRDVNGTLYVVYKVDGNSIGHGGGCNNGKKPIVSTPIMLQQLKDDGVTPVGDPVEILTNEKVDG PLVEAPDIIRTDRGIYYLFFSSHCFTSSKYSVKYAWSTSLKGPYTRAERPLFRSGDFGLKSPGGATASVDGSRIV FHAFCGDYRCMYAAAMNITANYTILPAAL* |
| Coding | >Ani_SJS100_1|g8165.t1 ATGAAAGGCCTCCCGTCACTGCTGAACAGCAGCAGCACCAAAAAATGGACACAATCCACCCCATCCACAGGCGAG GGTGAGAATGAGAGTGGTAGTACTATATCACCCACCAAGCCGCCCGAGCCATCCACACCCCCAGGAGGCTCAAAC ACCTCCATGATCTGGACGCGGAAGAAGATAATATGGCTCATCACCCTGATAGCTCTAAGCGTAGCCATAATCGTG GTGGTGATAACCGTCCCAGTAGTTCTCCTGCTGGACGATAAACACAACGACGATCCCAGCTACTACAACAGCGCC AACCGTCCAGTCCGCGTCGTGCATGATTTCCCCGACCCGGGTCTAATCCAGGTGAACAGCACGTGGTATGCATAC GCTACAGTCGCCACACCGGATAATCCTGACGTCCCTCACGTCCCGGTATCGACATCGCGGAACTTTAGCAGCTGG ACCTGGTTGCAGGGATACGATGTCATGCCTGCAATTAGCAGTTGGGAAACGAATATGAACCAGTACGCTCCGGAC GTGATTCAACGCAAAGACGGCCACTTCGTCCTCTACTACTCAGGCGAACTAAAAGACTGGCTCCGCCACCACTGC GTCGGCGCCGCTGTCTCCAACGGCACAAGTCCCCTAGGACCATACATCCCCCACAACACCACCCTCGCCTGTCCC CGCGACCACGGCGGTGCCATCGACCCCGCCCCCTTCAGAGACGTCAACGGGACCCTCTACGTCGTGTACAAAGTC GACGGCAACAGCATCGGCCACGGCGGAGGCTGCAACAACGGCAAGAAACCCATCGTCTCCACGCCCATCATGCTC CAACAACTCAAAGACGATGGAGTCACCCCCGTCGGTGATCCCGTTGAAATTCTAACCAACGAAAAAGTCGATGGG CCGTTAGTCGAGGCCCCGGACATTATTCGAACTGATCGCGGCATCTATTATCTGTTCTTCTCTTCGCATTGCTTT ACATCATCGAAGTATAGTGTTAAGTATGCATGGTCGACATCGCTAAAGGGGCCGTATACCAGGGCTGAGAGGCCC TTGTTCCGGTCTGGGGACTTTGGGCTAAAGTCTCCTGGCGGTGCGACGGCTTCAGTTGACGGGTCTAGGATTGTT TTTCATGCCTTTTGTGGGGATTATAGATGTATGTATGCCGCGGCGATGAATATTACGGCTAATTATACGATTTTG CCGGCGGCGCTTTGA |
| Transcript | >Ani_SJS100_1|g8165.t1 ATGAAAGGCCTCCCGTCACTGCTGAACAGCAGCAGCACCAAAAAATGGACACAATCCACCCCATCCACAGGCGAG GGTGAGAATGAGAGTGGTAGTACTATATCACCCACCAAGCCGCCCGAGCCATCCACACCCCCAGGAGGCTCAAAC ACCTCCATGATCTGGACGCGGAAGAAGATAATATGGCTCATCACCCTGATAGCTCTAAGCGTAGCCATAATCGTG GTGGTGATAACCGTCCCAGTAGTTCTCCTGCTGGACGATAAACACAACGACGATCCCAGCTACTACAACAGCGCC AACCGTCCAGTCCGCGTCGTGCATGATTTCCCCGACCCGGGTCTAATCCAGGTGAACAGCACGTGGTATGCATAC GCTACAGTCGCCACACCGGATAATCCTGACGTCCCTCACGTCCCGGTATCGACATCGCGGAACTTTAGCAGCTGG ACCTGGTTGCAGGGATACGATGTCATGCCTGCAATTAGCAGTTGGGAAACGAATATGAACCAGTACGCTCCGGAC GTGATTCAACGCAAAGACGGCCACTTCGTCCTCTACTACTCAGGCGAACTAAAAGACTGGCTCCGCCACCACTGC GTCGGCGCCGCTGTCTCCAACGGCACAAGTCCCCTAGGACCATACATCCCCCACAACACCACCCTCGCCTGTCCC CGCGACCACGGCGGTGCCATCGACCCCGCCCCCTTCAGAGACGTCAACGGGACCCTCTACGTCGTGTACAAAGTC GACGGCAACAGCATCGGCCACGGCGGAGGCTGCAACAACGGCAAGAAACCCATCGTCTCCACGCCCATCATGCTC CAACAACTCAAAGACGATGGAGTCACCCCCGTCGGTGATCCCGTTGAAATTCTAACCAACGAAAAAGTCGATGGG CCGTTAGTCGAGGCCCCGGACATTATTCGAACTGATCGCGGCATCTATTATCTGTTCTTCTCTTCGCATTGCTTT ACATCATCGAAGTATAGTGTTAAGTATGCATGGTCGACATCGCTAAAGGGGCCGTATACCAGGGCTGAGAGGCCC TTGTTCCGGTCTGGGGACTTTGGGCTAAAGTCTCCTGGCGGTGCGACGGCTTCAGTTGACGGGTCTAGGATTGTT TTTCATGCCTTTTGTGGGGATTATAGATGTATGTATGCCGCGGCGATGAATATTACGGCTAATTATACGATTTTG CCGGCGGCGCTTTGA |
| Gene | >Ani_SJS100_1|g8165.t1 ATGAAAGGCCTCCCGTCACTGCTGAACAGCAGCAGCACCAAAAAATGGACACAATCCACCCCATCCACAGGCGAG GGTGAGAATGAGAGTGGTAGTACTATATCACCCACCAAGCCGCCCGAGCCATCCACACCCCCAGGAGGCTCAAAC ACCTCCATGATCTGGACGCGGAAGAAGATAATATGGCTCATCACCCTGATAGCTCTAAGCGTAGCCATAATCGTG GTGGTGATAACCGTCCCAGTAGTTCTCCTGCTGGACGATAAACACAACGACGATCCCAGCTACTACAACAGCGCC AACCGTCCAGTCCGCGTCGTGCATGATTTCCCCGACCCGGGTCTAATCCAGGTGAACAGCACGTGGTATGCATAC GCTACAGTCGCCACACCGGATAATCCTGACGTCCCTCACGTCCCGGTATCGACATCGCGGAACTTTAGCAGCTGG ACCTGGTTGCAGGGATACGATGTCATGCCTGCAATTAGCAGTTGGGAAACGAATATGAACCAGTACGCTCCGGAC GTGATTCAACGCGTAAGTACCAGCCCAACCTTCAAGCATAACCAAATCAACTAAATACCCTTATAGAAAGACGGC CACTTCGTCCTCTACTACTCAGGCGAACTAAAAGACTGGCTCCGCCACCACTGCGTCGGCGCCGCTGTCTCCAAC GGCACAAGTCCCCTAGGACCATACATCCCCCACAACACCACCCTCGCCTGTCCCCGCGACCACGGCGGTGCCATC GACCCCGCCCCCTTCAGAGACGTCAACGGGACCCTCTACGTCGTGTACAAAGTCGACGGCAACAGCATCGGCCAC GGCGGAGGCTGCAACAACGGCAAGAAACCCATCGTCTCCACGCCCATCATGCTCCAACAACTCAAAGACGATGGA GTCACCCCCGTCGGTGATCCCGTTGAAATTCTAACCAACGAAAAAGTCGATGGGCCGTTAGTCGAGGCCCCGGAC ATTATTCGAACTGATCGCGGCATCTATTATCTGTTCTTCTCTTCGCATTGCTTTACATCATCGAAGTATAGTGTT AAGTATGCATGGTCGACATCGCTAAAGGGGCCGTATACCAGGGCTGAGAGGCCCTTGTTCCGGTCTGGGGACTTT GGGCTAAAGTCTCCTGGCGGTGCGACGGCTTCAGTTGACGGGTCTAGGATTGTTTTTCATGCCTTTTGTGGGGAT TATAGATGTATGTATGCCGCGGCGATGAATATTACGGCTAATTATACGATTTTGCCGGCGGCGCTTTGA |