© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g8154.t1 |
| Gene name | |
| Location | scaffold_061:208308..209832 |
| Strand | + |
| Gene length (bp) | 1524 |
| Transcript length (bp) | 1524 |
| Coding sequence length (bp) | 1524 |
| Protein length (aa) | 508 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 2.4E-60 | 6 | 462 |
| PF13520 | AA_permease_2 | Amino acid permease | 3.5E-23 | 7 | 426 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 80 | 102 | 22 |
| 3 | 107 | 124 | 17 |
| 4 | 137 | 159 | 22 |
| 5 | 179 | 201 | 22 |
| 6 | 233 | 252 | 19 |
| 7 | 272 | 294 | 22 |
| 8 | 327 | 349 | 22 |
| 9 | 359 | 381 | 22 |
| 10 | 402 | 424 | 22 |
| 11 | 444 | 461 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8154.t1 MALIPTFGTGLFIGAGQALAAGGPASLLGSYVLVFFLSYCLTTAIAEIAAHRPALNGTMVAHSYEYGSNHLGFSL GYLRWYSLAMMVPFEITTAMVNLSLWTPEPSMAIRIAMVAVLILLFNMLPQRAFQRTETIFTGLKIVTTAGLTIC SLFLAIRGIPGTPIRGFRYWHEPGPMNEYLIPGGGGRCLGFLQCFLYSVISFTFTPEITVQRAERSNTEGGPSIL SMARTDSGYLFALYILSAFMMTFVSPFDEPRLTNYGTGAGTSPFVVGFVRAGIPALRILVTVLIFLSSVASGRSF LYISSRTLYTLAESGHAPAMLTRCNRYDVPYVAILTSALFSMFAFLSLAESSSALFNSLMYFITTSGSISWLCSS IIYLRFRRKTEEQGFIRVHQSRVQPYGVYVGILGCTLLPIANALVLAFPPPSSEELPVQSWSQLRMRNAIPVYLG VLSFLSLYFGHQARTAIIQRRLKSEDELTSRRRWWRIIWPKRIEPSSSAPVSSPPEP* |
| Coding | >Ani_SJS100_1|g8154.t1 ATGGCTCTTATTCCCACCTTTGGAACCGGCCTCTTCATTGGGGCCGGCCAAGCTCTGGCTGCCGGTGGTCCAGCA TCATTACTTGGTTCATATGTACTGGTATTTTTCTTATCTTACTGCTTGACAACAGCCATTGCAGAGATTGCAGCC CACCGACCTGCACTCAACGGTACCATGGTGGCTCACAGCTATGAATATGGCTCCAACCATCTGGGGTTTTCTTTA GGCTACCTCAGATGGTACTCCCTGGCAATGATGGTTCCCTTCGAGATCACCACTGCCATGGTCAATCTCAGTTTG TGGACTCCTGAGCCCAGCATGGCGATCCGAATTGCAATGGTCGCGGTCCTGATCCTTCTATTCAATATGCTCCCC CAGCGGGCTTTCCAGAGAACTGAAACTATTTTCACGGGTCTGAAGATCGTCACTACTGCGGGCCTGACAATTTGC TCGCTGTTCCTAGCAATTCGAGGTATCCCAGGAACACCAATACGAGGATTTCGTTACTGGCACGAACCTGGACCC ATGAACGAGTATCTCATCCCCGGCGGTGGGGGGCGGTGCCTTGGATTCCTACAATGCTTTCTATACAGCGTGATC TCTTTCACCTTCACTCCCGAAATAACTGTTCAGAGGGCTGAGCGTTCCAACACGGAAGGAGGTCCTAGCATCCTG AGCATGGCCCGAACGGACAGTGGCTATCTTTTTGCCCTCTACATTCTAAGCGCGTTCATGATGACCTTTGTTAGT CCATTTGATGAGCCTCGACTGACCAATTATGGCACGGGCGCCGGCACATCGCCCTTCGTCGTGGGCTTCGTTCGC GCGGGCATCCCGGCGTTACGGATCCTGGTGACCGTGTTGATATTCCTTTCATCGGTCGCCTCTGGGCGCTCTTTC CTCTACATATCCTCTCGCACACTCTACACCTTGGCCGAATCTGGACATGCTCCAGCAATGCTTACGAGATGCAAC CGATATGACGTGCCCTATGTGGCCATACTGACATCTGCGCTATTCTCAATGTTTGCTTTCCTGTCGCTGGCAGAG TCCAGCTCGGCCCTTTTCAATTCACTTATGTACTTTATTACTACGTCCGGCTCCATCTCATGGCTCTGCTCGAGT ATCATCTACCTTCGATTTCGGAGGAAGACCGAGGAACAGGGCTTTATTCGAGTCCACCAGTCCCGCGTCCAGCCC TACGGGGTATATGTTGGGATCCTAGGCTGCACCCTGCTGCCAATTGCCAATGCTCTCGTTCTTGCGTTTCCCCCA CCATCATCCGAGGAACTCCCGGTTCAGTCCTGGTCACAACTGCGAATGAGAAACGCTATTCCTGTATACCTTGGG GTCTTGTCATTCCTCTCGCTCTATTTCGGTCACCAAGCGAGAACTGCCATTATACAACGGAGACTGAAGTCGGAG GATGAGCTGACCAGTCGTCGAAGATGGTGGAGAATAATCTGGCCGAAGCGCATTGAACCGTCATCCAGTGCCCCC GTCTCGAGTCCCCCGGAGCCGTGA |
| Transcript | >Ani_SJS100_1|g8154.t1 ATGGCTCTTATTCCCACCTTTGGAACCGGCCTCTTCATTGGGGCCGGCCAAGCTCTGGCTGCCGGTGGTCCAGCA TCATTACTTGGTTCATATGTACTGGTATTTTTCTTATCTTACTGCTTGACAACAGCCATTGCAGAGATTGCAGCC CACCGACCTGCACTCAACGGTACCATGGTGGCTCACAGCTATGAATATGGCTCCAACCATCTGGGGTTTTCTTTA GGCTACCTCAGATGGTACTCCCTGGCAATGATGGTTCCCTTCGAGATCACCACTGCCATGGTCAATCTCAGTTTG TGGACTCCTGAGCCCAGCATGGCGATCCGAATTGCAATGGTCGCGGTCCTGATCCTTCTATTCAATATGCTCCCC CAGCGGGCTTTCCAGAGAACTGAAACTATTTTCACGGGTCTGAAGATCGTCACTACTGCGGGCCTGACAATTTGC TCGCTGTTCCTAGCAATTCGAGGTATCCCAGGAACACCAATACGAGGATTTCGTTACTGGCACGAACCTGGACCC ATGAACGAGTATCTCATCCCCGGCGGTGGGGGGCGGTGCCTTGGATTCCTACAATGCTTTCTATACAGCGTGATC TCTTTCACCTTCACTCCCGAAATAACTGTTCAGAGGGCTGAGCGTTCCAACACGGAAGGAGGTCCTAGCATCCTG AGCATGGCCCGAACGGACAGTGGCTATCTTTTTGCCCTCTACATTCTAAGCGCGTTCATGATGACCTTTGTTAGT CCATTTGATGAGCCTCGACTGACCAATTATGGCACGGGCGCCGGCACATCGCCCTTCGTCGTGGGCTTCGTTCGC GCGGGCATCCCGGCGTTACGGATCCTGGTGACCGTGTTGATATTCCTTTCATCGGTCGCCTCTGGGCGCTCTTTC CTCTACATATCCTCTCGCACACTCTACACCTTGGCCGAATCTGGACATGCTCCAGCAATGCTTACGAGATGCAAC CGATATGACGTGCCCTATGTGGCCATACTGACATCTGCGCTATTCTCAATGTTTGCTTTCCTGTCGCTGGCAGAG TCCAGCTCGGCCCTTTTCAATTCACTTATGTACTTTATTACTACGTCCGGCTCCATCTCATGGCTCTGCTCGAGT ATCATCTACCTTCGATTTCGGAGGAAGACCGAGGAACAGGGCTTTATTCGAGTCCACCAGTCCCGCGTCCAGCCC TACGGGGTATATGTTGGGATCCTAGGCTGCACCCTGCTGCCAATTGCCAATGCTCTCGTTCTTGCGTTTCCCCCA CCATCATCCGAGGAACTCCCGGTTCAGTCCTGGTCACAACTGCGAATGAGAAACGCTATTCCTGTATACCTTGGG GTCTTGTCATTCCTCTCGCTCTATTTCGGTCACCAAGCGAGAACTGCCATTATACAACGGAGACTGAAGTCGGAG GATGAGCTGACCAGTCGTCGAAGATGGTGGAGAATAATCTGGCCGAAGCGCATTGAACCGTCATCCAGTGCCCCC GTCTCGAGTCCCCCGGAGCCGTGA |
| Gene | >Ani_SJS100_1|g8154.t1 ATGGCTCTTATTCCCACCTTTGGAACCGGCCTCTTCATTGGGGCCGGCCAAGCTCTGGCTGCCGGTGGTCCAGCA TCATTACTTGGTTCATATGTACTGGTATTTTTCTTATCTTACTGCTTGACAACAGCCATTGCAGAGATTGCAGCC CACCGACCTGCACTCAACGGTACCATGGTGGCTCACAGCTATGAATATGGCTCCAACCATCTGGGGTTTTCTTTA GGCTACCTCAGATGGTACTCCCTGGCAATGATGGTTCCCTTCGAGATCACCACTGCCATGGTCAATCTCAGTTTG TGGACTCCTGAGCCCAGCATGGCGATCCGAATTGCAATGGTCGCGGTCCTGATCCTTCTATTCAATATGCTCCCC CAGCGGGCTTTCCAGAGAACTGAAACTATTTTCACGGGTCTGAAGATCGTCACTACTGCGGGCCTGACAATTTGC TCGCTGTTCCTAGCAATTCGAGGTATCCCAGGAACACCAATACGAGGATTTCGTTACTGGCACGAACCTGGACCC ATGAACGAGTATCTCATCCCCGGCGGTGGGGGGCGGTGCCTTGGATTCCTACAATGCTTTCTATACAGCGTGATC TCTTTCACCTTCACTCCCGAAATAACTGTTCAGAGGGCTGAGCGTTCCAACACGGAAGGAGGTCCTAGCATCCTG AGCATGGCCCGAACGGACAGTGGCTATCTTTTTGCCCTCTACATTCTAAGCGCGTTCATGATGACCTTTGTTAGT CCATTTGATGAGCCTCGACTGACCAATTATGGCACGGGCGCCGGCACATCGCCCTTCGTCGTGGGCTTCGTTCGC GCGGGCATCCCGGCGTTACGGATCCTGGTGACCGTGTTGATATTCCTTTCATCGGTCGCCTCTGGGCGCTCTTTC CTCTACATATCCTCTCGCACACTCTACACCTTGGCCGAATCTGGACATGCTCCAGCAATGCTTACGAGATGCAAC CGATATGACGTGCCCTATGTGGCCATACTGACATCTGCGCTATTCTCAATGTTTGCTTTCCTGTCGCTGGCAGAG TCCAGCTCGGCCCTTTTCAATTCACTTATGTACTTTATTACTACGTCCGGCTCCATCTCATGGCTCTGCTCGAGT ATCATCTACCTTCGATTTCGGAGGAAGACCGAGGAACAGGGCTTTATTCGAGTCCACCAGTCCCGCGTCCAGCCC TACGGGGTATATGTTGGGATCCTAGGCTGCACCCTGCTGCCAATTGCCAATGCTCTCGTTCTTGCGTTTCCCCCA CCATCATCCGAGGAACTCCCGGTTCAGTCCTGGTCACAACTGCGAATGAGAAACGCTATTCCTGTATACCTTGGG GTCTTGTCATTCCTCTCGCTCTATTTCGGTCACCAAGCGAGAACTGCCATTATACAACGGAGACTGAAGTCGGAG GATGAGCTGACCAGTCGTCGAAGATGGTGGAGAATAATCTGGCCGAAGCGCATTGAACCGTCATCCAGTGCCCCC GTCTCGAGTCCCCCGGAGCCGTGA |