© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g8152.t1 |
| Gene name | |
| Location | scaffold_061:204474..206032 |
| Strand | - |
| Gene length (bp) | 1558 |
| Transcript length (bp) | 1407 |
| Coding sequence length (bp) | 1407 |
| Protein length (aa) | 469 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00953 | Glycos_transf_4 | Glycosyl transferase family 4 | 4.0E-34 | 149 | 323 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0016740 | transferase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 32 | 17 |
| 2 | 39 | 61 | 22 |
| 3 | 85 | 107 | 22 |
| 4 | 178 | 200 | 22 |
| 5 | 215 | 237 | 22 |
| 6 | 244 | 266 | 22 |
| 7 | 276 | 298 | 22 |
| 8 | 311 | 333 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8152.t1 MAAANSSSLSRQETWRLFALVGACVGILLNTFQGDGAPLVASLAFSGIAFAVTFSMIRWLVPVFLKAGLKGRDMA KPRRPEIPETMGAVCAIVYLLALIFFIPFAFYKDIVAATSGGGNRDVVIEVEHVETGRMLHRFPHGKLASYLSGL LSLQCIVILGIGDDLLDIRWRHKVLIPAFGAIPMLIVYFVDFGVTQVVVPVPLQPYLGSTIDLGWLYYAYMAAVA IFCPNSINMLAGINGVEVAQSLVIAVLLIANDVLYLAPITPYPHPATDSHLFSLYFLLPFVGVSVALLCHNWYPS KVFVGDTYCYFAGMVFAVVGILGHFSKTLLLLFIPQIFNFLYSTPQLFNLIPCPRHRLPKFNSVTGLLDASVTEW TVPPSPLVATALNLLHTLRLMRVTKNEQGQIVESTNLTILNLWLVWAGPMKENQLAWSMVAVQTFCGLAGLFVRH RLALLVFREDNLALGGSV* |
| Coding | >Ani_SJS100_1|g8152.t1 ATGGCAGCAGCAAATTCAAGCTCTCTTTCTCGCCAGGAGACCTGGCGGCTCTTCGCCTTGGTGGGAGCCTGCGTC GGCATCCTTCTGAATACCTTCCAAGGCGATGGTGCGCCCTTGGTAGCTTCGCTCGCGTTTAGCGGTATCGCATTC GCAGTCACGTTTAGTATGATCAGATGGCTTGTACCGGTGTTCTTGAAGGCAGGCCTGAAAGGACGCGATATGGCG AAACCCAGGAGACCCGAAATACCGGAAACAATGGGAGCCGTTTGCGCTATTGTCTATCTCCTTGCTCTGATCTTC TTTATCCCCTTTGCTTTCTACAAGGATATAGTGGCTGCCACCTCAGGTGGAGGCAACCGAGATGTTGTAATTGAG GTAGAACACGTTGAGACTGGCCGGATGCTACACCGGTTTCCTCACGGGAAGCTTGCGTCCTATCTCTCCGGTCTT CTTTCACTGCAATGTATTGTCATTCTCGGAATTGGCGACGACCTACTTGATATACGATGGAGACACAAAGTCCTG ATTCCCGCCTTTGGAGCTATTCCAATGCTTATAGTGTACTTTGTGGACTTTGGTGTGACGCAAGTCGTCGTGCCA GTACCGCTGCAGCCCTATCTGGGCTCCACTATCGACCTCGGCTGGTTGTACTATGCCTACATGGCGGCTGTGGCC ATCTTCTGCCCTAACTCCATCAACATGCTGGCTGGAATCAACGGAGTTGAAGTGGCCCAGTCTTTGGTGATAGCG GTTCTGCTGATAGCAAACGACGTTTTATATTTGGCCCCCATTACGCCATACCCGCATCCGGCAACAGACTCTCAT CTGTTCTCTCTATACTTCTTGTTGCCTTTTGTTGGAGTATCCGTGGCCCTTTTGTGCCATAACTGGTACCCATCG AAAGTCTTTGTGGGAGATACATATTGCTACTTTGCGGGCATGGTGTTTGCCGTCGTTGGCATCTTGGGCCACTTC AGCAAGACGCTCCTGCTGCTCTTCATCCCGCAGATCTTCAACTTCTTATATTCAACGCCACAACTTTTTAACTTG ATCCCTTGCCCGCGTCATCGGTTGCCCAAATTCAATTCCGTCACTGGTCTGTTGGATGCATCGGTGACCGAATGG ACCGTGCCACCATCACCACTGGTGGCTACTGCTCTCAATCTTCTGCACACATTACGGCTGATGCGAGTCACCAAG AACGAACAGGGCCAGATTGTGGAGTCTACAAATCTCACCATCCTCAACCTGTGGCTCGTATGGGCTGGGCCGATG AAGGAGAACCAACTAGCGTGGAGCATGGTGGCTGTTCAGACATTTTGCGGCCTTGCTGGCCTGTTTGTGAGGCAC CGCCTAGCACTGCTGGTATTCCGAGAAGATAACCTGGCCTTGGGGGGTTCCGTATAG |
| Transcript | >Ani_SJS100_1|g8152.t1 ATGGCAGCAGCAAATTCAAGCTCTCTTTCTCGCCAGGAGACCTGGCGGCTCTTCGCCTTGGTGGGAGCCTGCGTC GGCATCCTTCTGAATACCTTCCAAGGCGATGGTGCGCCCTTGGTAGCTTCGCTCGCGTTTAGCGGTATCGCATTC GCAGTCACGTTTAGTATGATCAGATGGCTTGTACCGGTGTTCTTGAAGGCAGGCCTGAAAGGACGCGATATGGCG AAACCCAGGAGACCCGAAATACCGGAAACAATGGGAGCCGTTTGCGCTATTGTCTATCTCCTTGCTCTGATCTTC TTTATCCCCTTTGCTTTCTACAAGGATATAGTGGCTGCCACCTCAGGTGGAGGCAACCGAGATGTTGTAATTGAG GTAGAACACGTTGAGACTGGCCGGATGCTACACCGGTTTCCTCACGGGAAGCTTGCGTCCTATCTCTCCGGTCTT CTTTCACTGCAATGTATTGTCATTCTCGGAATTGGCGACGACCTACTTGATATACGATGGAGACACAAAGTCCTG ATTCCCGCCTTTGGAGCTATTCCAATGCTTATAGTGTACTTTGTGGACTTTGGTGTGACGCAAGTCGTCGTGCCA GTACCGCTGCAGCCCTATCTGGGCTCCACTATCGACCTCGGCTGGTTGTACTATGCCTACATGGCGGCTGTGGCC ATCTTCTGCCCTAACTCCATCAACATGCTGGCTGGAATCAACGGAGTTGAAGTGGCCCAGTCTTTGGTGATAGCG GTTCTGCTGATAGCAAACGACGTTTTATATTTGGCCCCCATTACGCCATACCCGCATCCGGCAACAGACTCTCAT CTGTTCTCTCTATACTTCTTGTTGCCTTTTGTTGGAGTATCCGTGGCCCTTTTGTGCCATAACTGGTACCCATCG AAAGTCTTTGTGGGAGATACATATTGCTACTTTGCGGGCATGGTGTTTGCCGTCGTTGGCATCTTGGGCCACTTC AGCAAGACGCTCCTGCTGCTCTTCATCCCGCAGATCTTCAACTTCTTATATTCAACGCCACAACTTTTTAACTTG ATCCCTTGCCCGCGTCATCGGTTGCCCAAATTCAATTCCGTCACTGGTCTGTTGGATGCATCGGTGACCGAATGG ACCGTGCCACCATCACCACTGGTGGCTACTGCTCTCAATCTTCTGCACACATTACGGCTGATGCGAGTCACCAAG AACGAACAGGGCCAGATTGTGGAGTCTACAAATCTCACCATCCTCAACCTGTGGCTCGTATGGGCTGGGCCGATG AAGGAGAACCAACTAGCGTGGAGCATGGTGGCTGTTCAGACATTTTGCGGCCTTGCTGGCCTGTTTGTGAGGCAC CGCCTAGCACTGCTGGTATTCCGAGAAGATAACCTGGCCTTGGGGGGTTCCGTATAG |
| Gene | >Ani_SJS100_1|g8152.t1 ATGGCAGCAGCAAATTCAAGCTCTCTTTCTCGCCAGGAGACCTGGCGGCTCTTCGCCTTGGTGGGAGCCTGCGTC GGCATCCTTCTGAATACCTTCCAAGGCGATGGTGCGCCCTTGGTAGCTTCGCTCGCGTTTAGCGGTATCGCATTC GCAGTCACGTTTAGTATGATCAGATGGCTTGTACCGGTGTTCTTGAAGGCAGGCCTGAAAGGACGCGATATGGCG AAACCCAGGAGACCCGAAATGTATGAATAACCCATGTTTCTTTATTTTGTTGTATGATAGTCTTTCATTGCATAC TTGACCTCATGGCCAATGCTAATGGGCTTGCGCTTAGACCGGAAACAATGGGAGCCGTTTGCGCTATTGTCTATC TCCTTGCTCTGATCTTCTTTATCCCCTTTGCTTTCTACAAGGATATAGTGGCTGCCACCTCAGGTGGAGGCAACC GAGATGTTGTAATTGAGGTAGAACACGTTGAGACTGGCCGGATGCTACACCGGTTTCCTCACGGGAAGGTCAGTA TCATTTTGAGTGCTTTGATCTGCGCTAGCCTACTGACAGCGGAAGTTCACAGCTTGCGTCCTATCTCTCCGGTCT TCTTTCACTGCAATGTATTGTCATTCTCGGAATTGGCGACGACCTACTTGATATACGATGGAGACACAAAGTCCT GATTCCCGCCTTTGGAGCTATTCCAATGCTTATAGTGTACTTTGTGGACTTTGGTGTGACGCAAGTCGTCGTGCC AGTACCGCTGCAGCCCTATCTGGGCTCCACTATCGACCTCGGCTGGTTGTACTATGCCTACATGGCGGCTGTGGC CATCTTCTGCCCTAACTCCATCAACATGCTGGCTGGAATCAACGGAGTTGAAGTGGCCCAGTCTTTGGTGATAGC GGTTCTGCTGATAGCAAACGACGTTTTATATTTGGCCCCCATTACGCCATACCCGCATCCGGCAACAGACTCTCA TCTGTTCTCTCTATACTTCTTGTTGCCTTTTGTTGGAGTATCCGTGGCCCTTTTGTGCCATAACTGGTACCCATC GAAAGTCTTTGTGGGAGATACATATTGCTACTTTGCGGGCATGGTGTTTGCCGTCGTTGGCATCTTGGGCCACTT CAGCAAGACGCTCCTGCTGCTCTTCATCCCGCAGATCTTCAACTTCTTATATTCAACGCCACAACTTTTTAACTT GATCCCTTGCCCGCGTCATCGGTTGCCCAAATTCAATTCCGTCACTGGTCTGTTGGATGCATCGGTGACCGAATG GACCGTGCCACCATCACCACTGGTGGCTACTGCTCTCAATCTTCTGCACACATTACGGCTGATGCGAGTCACCAA GAACGAACAGGGCCAGATTGTGGAGTCTACAAATCTCACCATCCTCAACCTGTGGCTCGTATGGGCTGGGCCGAT GAAGGAGAACCAACTAGCGTGGAGCATGGTGGCTGTTCAGACATTTTGCGGCCTTGCTGGCCTGTTTGTGAGGCA CCGCCTAGCACTGCTGGTATTCCGAGAAGATAACCTGGCCTTGGGGGGTTCCGTATAG |