© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8147.t1 |
| Gene name | |
| Location | scaffold_061:173900..175314 |
| Strand | + |
| Gene length (bp) | 1414 |
| Transcript length (bp) | 1335 |
| Coding sequence length (bp) | 1335 |
| Protein length (aa) | 445 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10332 | DUF2418 | Protein of unknown function (DUF2418) | 5.8E-36 | 164 | 268 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 62 | 19 |
| 2 | 82 | 104 | 22 |
| 3 | 176 | 198 | 22 |
| 4 | 208 | 230 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8147.t1 MPRLVRRRPLTERIKSYLNPLDFLLWLSEEIDTHDWDQFEKNWALPLGIALNVVFLIARANSQSYSSQAIDDVFG DDGSTPWLSWFSSFIVHLLTTFTAFNAFYTFYRKRHYRMFEASIDQAPATPSAHRVRVNSTPVTASPLKYLADTI ARSAQSRAHPDAQRDVWELAVWDPLPICIRLFCLFSPGHVLVYWVFLPTQLSDPRPSVTIVTTIFIAALLSVQMT FLSSSYTQQAKDSMVVHKEVLREYDTKYVHPRTQPLMRDVATQFSESDPDVKQNKVDTFTPTVVLHRGFKTSPNP NYVSHVDPEGRSSVRQSFAATPTGVSHRAAALQTPSHLRDASPIVRSSISAIRQPQFRQTPTTTGDGGSLGIYSH ANSPLKKSTPANLERRLQSNGDFFYKERGTSAMRRPSSPLKRSNVPAGSPLTPGPRRSQVDARRDSGRF* |
| Coding | >Ani_SJS100_1|g8147.t1 ATGCCCCGGCTTGTCCGTCGCCGACCATTGACGGAGCGCATCAAGTCCTACTTGAATCCTCTGGACTTTCTCTTG TGGCTGTCGGAGGAGATCGATACTCATGACTGGGACCAGTTTGAGAAGAACTGGGCGCTCCCCCTGGGGATAGCT CTGAATGTTGTCTTTTTGATCGCCAGGGCCAATAGTCAATCATACAGCAGTCAAGCCATAGATGATGTCTTTGGC GATGATGGAAGCACTCCATGGCTCAGTTGGTTTTCTTCCTTCATCGTCCACCTCCTCACCACCTTTACCGCGTTC AACGCCTTCTATACATTTTACCGGAAGCGACACTATCGCATGTTTGAAGCATCGATCGATCAGGCTCCTGCAACT CCCTCCGCTCATCGAGTCCGCGTTAATTCGACTCCTGTAACCGCTTCGCCACTGAAATATCTGGCGGATACGATA GCCAGATCAGCCCAGTCGAGAGCCCACCCAGACGCACAGCGAGATGTATGGGAACTTGCCGTCTGGGACCCTCTA CCTATTTGCATTCGATTGTTCTGCCTCTTCAGTCCTGGACATGTCTTAGTATACTGGGTTTTCCTGCCCACCCAG CTATCCGATCCCCGACCAAGTGTGACTATTGTGACCACCATCTTCATAGCGGCACTCCTCTCGGTACAGATGACG TTCCTTTCCTCGTCCTATACCCAGCAAGCGAAGGATTCAATGGTGGTTCATAAGGAGGTGCTTCGTGAATACGAC ACCAAATACGTTCACCCTCGTACCCAGCCTCTGATGAGAGACGTGGCCACTCAGTTCTCCGAGTCCGATCCCGAT GTTAAGCAGAATAAGGTTGATACCTTCACGCCCACTGTCGTACTTCATAGAGGCTTCAAGACGAGCCCAAATCCC AATTACGTCAGCCATGTGGACCCCGAGGGCCGCTCTTCCGTGCGCCAGTCCTTTGCAGCGACACCTACTGGAGTG TCTCATCGTGCAGCCGCGTTGCAGACCCCGAGCCATCTGCGAGATGCTTCCCCTATTGTGCGAAGCTCGATCTCT GCAATTCGCCAGCCTCAGTTCCGGCAGACACCGACGACTACAGGTGATGGTGGAAGCCTTGGCATTTACTCGCAT GCCAACTCGCCTCTGAAGAAGTCTACACCAGCCAATCTTGAACGTCGTCTTCAGAGCAATGGTGACTTCTTTTAC AAAGAACGGGGAACAAGTGCGATGAGAAGGCCATCTAGTCCCCTCAAAAGAAGTAATGTCCCCGCAGGCAGTCCC TTAACTCCGGGACCGAGGCGGAGTCAAGTGGACGCACGCCGCGACAGTGGACGGTTTTAG |
| Transcript | >Ani_SJS100_1|g8147.t1 ATGCCCCGGCTTGTCCGTCGCCGACCATTGACGGAGCGCATCAAGTCCTACTTGAATCCTCTGGACTTTCTCTTG TGGCTGTCGGAGGAGATCGATACTCATGACTGGGACCAGTTTGAGAAGAACTGGGCGCTCCCCCTGGGGATAGCT CTGAATGTTGTCTTTTTGATCGCCAGGGCCAATAGTCAATCATACAGCAGTCAAGCCATAGATGATGTCTTTGGC GATGATGGAAGCACTCCATGGCTCAGTTGGTTTTCTTCCTTCATCGTCCACCTCCTCACCACCTTTACCGCGTTC AACGCCTTCTATACATTTTACCGGAAGCGACACTATCGCATGTTTGAAGCATCGATCGATCAGGCTCCTGCAACT CCCTCCGCTCATCGAGTCCGCGTTAATTCGACTCCTGTAACCGCTTCGCCACTGAAATATCTGGCGGATACGATA GCCAGATCAGCCCAGTCGAGAGCCCACCCAGACGCACAGCGAGATGTATGGGAACTTGCCGTCTGGGACCCTCTA CCTATTTGCATTCGATTGTTCTGCCTCTTCAGTCCTGGACATGTCTTAGTATACTGGGTTTTCCTGCCCACCCAG CTATCCGATCCCCGACCAAGTGTGACTATTGTGACCACCATCTTCATAGCGGCACTCCTCTCGGTACAGATGACG TTCCTTTCCTCGTCCTATACCCAGCAAGCGAAGGATTCAATGGTGGTTCATAAGGAGGTGCTTCGTGAATACGAC ACCAAATACGTTCACCCTCGTACCCAGCCTCTGATGAGAGACGTGGCCACTCAGTTCTCCGAGTCCGATCCCGAT GTTAAGCAGAATAAGGTTGATACCTTCACGCCCACTGTCGTACTTCATAGAGGCTTCAAGACGAGCCCAAATCCC AATTACGTCAGCCATGTGGACCCCGAGGGCCGCTCTTCCGTGCGCCAGTCCTTTGCAGCGACACCTACTGGAGTG TCTCATCGTGCAGCCGCGTTGCAGACCCCGAGCCATCTGCGAGATGCTTCCCCTATTGTGCGAAGCTCGATCTCT GCAATTCGCCAGCCTCAGTTCCGGCAGACACCGACGACTACAGGTGATGGTGGAAGCCTTGGCATTTACTCGCAT GCCAACTCGCCTCTGAAGAAGTCTACACCAGCCAATCTTGAACGTCGTCTTCAGAGCAATGGTGACTTCTTTTAC AAAGAACGGGGAACAAGTGCGATGAGAAGGCCATCTAGTCCCCTCAAAAGAAGTAATGTCCCCGCAGGCAGTCCC TTAACTCCGGGACCGAGGCGGAGTCAAGTGGACGCACGCCGCGACAGTGGACGGTTTTAG |
| Gene | >Ani_SJS100_1|g8147.t1 ATGCCCCGGCTTGTCCGTCGCCGACCATTGACGGAGCGCATCAAGTCCTACTTGAATCCTCTGGACTTTCTCTTG TGGCTGTCGGAGGAGATCGATACTCATGACTGGGACCAGTTTGAGAAGAACTGGGCGCTCCCCCTGGGGATAGCT CTGAATGTTGTCTTTTTGATCGCCAGGGCCAATAGTCAATCATACAGCAGTCAAGCCATAGATGATGTCTTTGGC GATGATGGAAGCACTCCATGGCTCAGTTGGTTTGTATGTGACGCCGAATCGACTTTGACTTTGCCTTGAATATAC GCTCCATGTGCTGCATTGCTAACGCAACGGGTGATAGTCTTCCTTCATCGTCCACCTCCTCACCACCTTTACCGC GTTCAACGCCTTCTATACATTTTACCGGAAGCGACACTATCGCATGTTTGAAGCATCGATCGATCAGGCTCCTGC AACTCCCTCCGCTCATCGAGTCCGCGTTAATTCGACTCCTGTAACCGCTTCGCCACTGAAATATCTGGCGGATAC GATAGCCAGATCAGCCCAGTCGAGAGCCCACCCAGACGCACAGCGAGATGTATGGGAACTTGCCGTCTGGGACCC TCTACCTATTTGCATTCGATTGTTCTGCCTCTTCAGTCCTGGACATGTCTTAGTATACTGGGTTTTCCTGCCCAC CCAGCTATCCGATCCCCGACCAAGTGTGACTATTGTGACCACCATCTTCATAGCGGCACTCCTCTCGGTACAGAT GACGTTCCTTTCCTCGTCCTATACCCAGCAAGCGAAGGATTCAATGGTGGTTCATAAGGAGGTGCTTCGTGAATA CGACACCAAATACGTTCACCCTCGTACCCAGCCTCTGATGAGAGACGTGGCCACTCAGTTCTCCGAGTCCGATCC CGATGTTAAGCAGAATAAGGTTGATACCTTCACGCCCACTGTCGTACTTCATAGAGGCTTCAAGACGAGCCCAAA TCCCAATTACGTCAGCCATGTGGACCCCGAGGGCCGCTCTTCCGTGCGCCAGTCCTTTGCAGCGACACCTACTGG AGTGTCTCATCGTGCAGCCGCGTTGCAGACCCCGAGCCATCTGCGAGATGCTTCCCCTATTGTGCGAAGCTCGAT CTCTGCAATTCGCCAGCCTCAGTTCCGGCAGACACCGACGACTACAGGTGATGGTGGAAGCCTTGGCATTTACTC GCATGCCAACTCGCCTCTGAAGAAGTCTACACCAGCCAATCTTGAACGTCGTCTTCAGAGCAATGGTGACTTCTT TTACAAAGAACGGGGAACAAGTGCGATGAGAAGGCCATCTAGTCCCCTCAAAAGAAGTAATGTCCCCGCAGGCAG TCCCTTAACTCCGGGACCGAGGCGGAGTCAAGTGGACGCACGCCGCGACAGTGGACGGTTTTAG |