Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g8090.t1
Gene name
Location	scaffold_061:8498..9755
Strand	-
Gene length (bp)	1257
Transcript length (bp)	1071
Coding sequence length (bp)	1071
Protein length (aa)	357

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03935	SKN1_KRE6_Sbg1	Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1	3.3E-172	5	356

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g8090.t1 MNFWYGWYDPDAVTTKDGSLEIRFDAFTNHELGYRSGMVQSWNKLCFSGGRLEASISLPGAGDVSGFWPGFWAMG NLGRPGYAATTDGTWPYSYWDGCDAGITPNQSSPDGINFLPGMRLPACTCEGADHPTPGKSRGAPEIDVIEASVG PLNNNPNAYIGTASQSLQMAPFDIWYMPDYEYTAVYDPRITEINSYRGGPYQQAMSGLTNLNNRWYNGTEYQVYA FEYTPGAVGNVTWFVGQDKTWTLDGRAIGPNGNVGQRMIPMEPMSIVMNLGMAWSFAPINATIRDLMPGIMRFDY IRIYQDPDNISVTCDPPGYETTEYIASHAEAYNNNNVTTWDEAGYDWPTNSLMHGC*
Coding	>Ani_SJS100_1\|g8090.t1 ATGAATTTCTGGTATGGTTGGTATGACCCGGATGCGGTCACGACGAAAGACGGATCGTTGGAGATTCGCTTCGAT GCGTTTACAAACCATGAGCTTGGATACCGTTCGGGAATGGTGCAAAGCTGGAATAAGCTGTGCTTCTCCGGTGGA CGCTTGGAAGCCAGTATCTCCCTACCCGGAGCTGGGGATGTATCTGGATTTTGGCCTGGGTTCTGGGCGATGGGC AACCTAGGCCGCCCGGGCTATGCTGCGACCACGGATGGCACGTGGCCATACAGCTACTGGGACGGATGCGACGCA GGCATTACGCCTAACCAAAGTTCTCCAGATGGTATCAATTTCCTTCCCGGCATGCGTCTACCGGCGTGCACTTGC GAAGGTGCCGATCATCCCACCCCGGGCAAGTCCCGCGGCGCCCCAGAAATCGACGTGATCGAGGCCAGTGTAGGG CCTCTGAACAACAACCCAAACGCATACATCGGAACCGCGTCCCAGAGTTTACAGATGGCACCATTTGACATCTGG TACATGCCTGACTACGAATACACTGCCGTGTACGACCCTCGTATCACCGAGATCAACTCCTATCGAGGCGGGCCG TATCAGCAGGCTATGTCTGGCCTGACTAACCTCAACAATCGCTGGTACAATGGGACCGAGTACCAGGTATATGCG TTCGAGTATACCCCGGGTGCGGTAGGCAACGTGACCTGGTTCGTGGGCCAGGATAAGACCTGGACCCTAGACGGG CGAGCTATTGGTCCTAACGGCAACGTTGGACAGCGAATGATTCCCATGGAGCCGATGTCGATAGTTATGAACCTG GGTATGGCATGGAGTTTCGCTCCTATAAATGCCACAATCCGCGACTTAATGCCTGGGATTATGAGATTTGATTAT ATCCGCATATACCAGGATCCGGACAACATCAGTGTCACCTGCGACCCACCAGGCTATGAGACGACCGAGTATATT GCCAGCCACGCAGAAGCGTACAATAACAACAACGTAACAACATGGGATGAAGCCGGCTACGACTGGCCCACGAAC TCATTAATGCACGGGTGCTAA
Transcript	>Ani_SJS100_1\|g8090.t1 ATGAATTTCTGGTATGGTTGGTATGACCCGGATGCGGTCACGACGAAAGACGGATCGTTGGAGATTCGCTTCGAT GCGTTTACAAACCATGAGCTTGGATACCGTTCGGGAATGGTGCAAAGCTGGAATAAGCTGTGCTTCTCCGGTGGA CGCTTGGAAGCCAGTATCTCCCTACCCGGAGCTGGGGATGTATCTGGATTTTGGCCTGGGTTCTGGGCGATGGGC AACCTAGGCCGCCCGGGCTATGCTGCGACCACGGATGGCACGTGGCCATACAGCTACTGGGACGGATGCGACGCA GGCATTACGCCTAACCAAAGTTCTCCAGATGGTATCAATTTCCTTCCCGGCATGCGTCTACCGGCGTGCACTTGC GAAGGTGCCGATCATCCCACCCCGGGCAAGTCCCGCGGCGCCCCAGAAATCGACGTGATCGAGGCCAGTGTAGGG CCTCTGAACAACAACCCAAACGCATACATCGGAACCGCGTCCCAGAGTTTACAGATGGCACCATTTGACATCTGG TACATGCCTGACTACGAATACACTGCCGTGTACGACCCTCGTATCACCGAGATCAACTCCTATCGAGGCGGGCCG TATCAGCAGGCTATGTCTGGCCTGACTAACCTCAACAATCGCTGGTACAATGGGACCGAGTACCAGGTATATGCG TTCGAGTATACCCCGGGTGCGGTAGGCAACGTGACCTGGTTCGTGGGCCAGGATAAGACCTGGACCCTAGACGGG CGAGCTATTGGTCCTAACGGCAACGTTGGACAGCGAATGATTCCCATGGAGCCGATGTCGATAGTTATGAACCTG GGTATGGCATGGAGTTTCGCTCCTATAAATGCCACAATCCGCGACTTAATGCCTGGGATTATGAGATTTGATTAT ATCCGCATATACCAGGATCCGGACAACATCAGTGTCACCTGCGACCCACCAGGCTATGAGACGACCGAGTATATT GCCAGCCACGCAGAAGCGTACAATAACAACAACGTAACAACATGGGATGAAGCCGGCTACGACTGGCCCACGAAC TCATTAATGCACGGGTGCTAA
Gene	>Ani_SJS100_1\|g8090.t1 ATGAATTTCTGGTATGGTGTGACGCAGGACCTAGAGGCTAGTACTGATATCGTATTTCATCGATATATCACGACT AACCGATTGACAGTGGTATGACCCGGATGCGGTCACGACGAAAGACGGATCGTTGGAGATTCGCTTCGATGCGTT TACAAACCATGAGCTTGGATACCGTTCGGGAATGGTGCAAAGCTGGAATAAGCTGTGCTTCTCCGGTGGACGCTT GGAAGCCAGTATCTCCCTACCCGGAGCTGGGGATGTATCTGGATTTTGGCCTGGGTTCTGGGCGATGGGCAACCT AGGCCGCCCGGGCTATGCTGCGACCACGGATGGCACGTGGCCATACAGCTACTGGGACGGATGCGACGCAGGCAT TACGCCTAACCAAAGTTCTCCAGATGGTATCAATTTCCTTCCCGGCATGCGTCTACCGGCGTGCACTTGCGAAGG TGCCGATCATCCCACCCCGGGCAAGTCCCGCGGCGCCCCAGAAATCGACGTGATCGAGGCCAGTGTAGGGCCTCT GAACAACAACCCAAACGCATACATCGGAACCGCGTCCCAGAGTTTACAGATGGCACCATTTGACATCTGGTACAT GCCTGACTACGGTAGGTGACTGACGTTGCTGACAAGCATGCGCCTGGCAATCCCTGATCTGACAATCTGCAGAAT ACACTGCCGTGTACGACCCTCGTATCACCGAGATCAACTCCTATCGAGGCGGGCCGTATCAGCAGGCTATGTCTG GCCTGACTAACCTCAACAATCGCTGGTACAATGGGACCGAGTACCAGGTATATGCGTTCGAGTATACCCCGGGTG CGGTAGGCAACGTGACCTGGTTCGTGGGCCAGGATAAGACCTGGACCCTAGACGGGCGAGCTATTGGTCCTAACG GCAACGTTGGACAGCGAATGATTCCCATGGAGCCGATGTCGATAGTTATGAACCTGGGTATGGCATGGAGTTTCG CTCCTATAAATGCCACAATCCGCGACTTAATGCCTGGGATTATGAGATTTGATTATATCCGCATATACCAGGATC CGGACAACATCAGTGTCACCTGCGACCCACCAGGCTATGAGACGACCGAGTATATTGCCAGCCACGCAGAAGCGT ACAATAACAACAACGTAACAACATGGTATGTGTATCCGTCCTCTGGACTTTGCAGCACAGGGTTTTCTAATGCAT AGCAGGGATGAAGCCGGCTACGACTGGCCCACGAACTCATTAATGCACGGGTGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail