Protein ID | Ani_SJS100_1|g8088.t1 |
Gene name | |
Location | scaffold_061:3206..5452 |
Strand | + |
Gene length (bp) | 2246 |
Transcript length (bp) | 1794 |
Coding sequence length (bp) | 1794 |
Protein length (aa) | 598 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10436 | BCDHK_Adom3 | Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase | 6.6E-73 | 181 | 414 |
PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 2.2E-12 | 460 | 587 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8088.t1 MGQYRSARVAAAAQAIHGVFEPGRFLLFPMTGWCDGQDPKSGSESAEEIATSSAKHGIADGNCPPPAHVTSDSPG IASLRSSPSKKSHPPPVAPAHFPPPFLCEAPFRGSSYRPPFRARLRAEVSLNLAALDHLEHLWNSYWLYRVLFQA VWPDPRVDIMWKPSESLMNTIRHYASFPATGVSLRQMVQFGDRPSTGTLFRASQFLSEELPIRLAHRVQDLGELP DGLSEMPSIKKVQDWYAQSFEEIINLPRPTLTQEVKTRLLRPGRLNGGTSRILSETTQNPSIREGQYRSSPSSLL NGNGNGKGAAVGRRYYAPSDDHGDWPPELNDYNERFAKTLQHIKRRHDSVVTTVAQGILEWKRKRQRLQIDSTVQ SFLDRFYMSRIGIRMLIGQHIALTEQTHVRQPNYVGIICTKTNVREVALEAIDNARFVCEDYYGLFDAPKVQLVC KDDLNFMYVPGHLSHMLFETLKNSLRAVVEAHGADKEAFPVTKVIIAEGKEDITIKISDEGGGIPRSAIPLVWTY MYTTVEQTPSLDPDFDKSDFKAPMAGFGYGLPISRLYARYFGGDLKLISMEGYGTDVYLHLNRLSSSSEPLQ* |
Coding | >Ani_SJS100_1|g8088.t1 ATGGGGCAATACAGATCTGCGAGGGTAGCAGCAGCAGCGCAGGCGATTCACGGAGTATTTGAGCCCGGACGGTTC CTGCTTTTCCCTATGACCGGGTGGTGCGATGGGCAAGATCCAAAGAGTGGCTCCGAATCGGCAGAGGAAATAGCA ACATCCTCGGCCAAGCACGGGATCGCAGACGGCAACTGCCCCCCACCAGCGCACGTGACCAGTGACTCCCCGGGA ATCGCGAGTCTCCGCAGCAGCCCATCCAAAAAGAGTCATCCTCCACCGGTCGCTCCTGCCCACTTCCCTCCGCCC TTTCTCTGCGAGGCACCATTCCGGGGATCTTCATACCGCCCGCCGTTCCGAGCTCGTCTGCGAGCGGAGGTGTCC CTCAACCTCGCTGCTCTCGATCATTTGGAGCACTTGTGGAATTCATATTGGTTGTATCGAGTGCTATTCCAGGCC GTCTGGCCTGATCCTCGCGTTGACATCATGTGGAAGCCGTCGGAGAGCCTGATGAACACCATCAGACATTATGCC AGCTTCCCTGCAACTGGTGTCTCTCTCCGGCAGATGGTGCAGTTTGGAGATAGACCCTCCACAGGCACCCTCTTT CGCGCCTCACAATTCCTTTCCGAAGAACTCCCAATACGCCTCGCTCATCGTGTTCAGGATCTTGGAGAACTTCCA GATGGACTCAGTGAAATGCCATCTATCAAGAAGGTCCAGGACTGGTACGCACAGTCGTTCGAGGAAATCATTAAC CTCCCCCGACCTACTCTGACCCAGGAAGTCAAGACTCGTCTGCTTCGTCCGGGGAGGCTCAACGGAGGCACTTCG AGGATCCTCTCCGAAACAACCCAGAACCCTAGCATCCGTGAAGGACAATATCGGTCGTCTCCCTCGTCCCTGTTG AATGGCAACGGCAACGGTAAAGGCGCCGCCGTGGGCCGAAGATACTATGCTCCATCTGACGACCACGGAGATTGG CCGCCAGAACTGAATGATTACAATGAACGCTTCGCCAAGACTTTGCAGCACATCAAGCGGAGACACGACAGTGTT GTAACTACCGTGGCTCAAGGTATTCTTGAATGGAAACGAAAGCGTCAACGTCTGCAGATTGATTCCACCGTCCAG TCCTTCCTCGATCGGTTCTACATGTCTCGGATTGGTATACGAATGTTGATTGGTCAACACATCGCCTTAACAGAA CAAACGCATGTGCGACAACCAAACTATGTCGGTATCATTTGTACGAAAACCAATGTGCGCGAGGTGGCCCTCGAG GCTATCGACAACGCTCGCTTCGTTTGTGAGGATTACTATGGCCTGTTTGATGCTCCCAAAGTGCAACTTGTCTGC AAGGACGATCTGAACTTCATGTATGTTCCGGGTCACTTGTCCCATATGCTCTTTGAAACCTTGAAGAACTCCCTG CGTGCTGTCGTGGAAGCCCACGGCGCAGACAAGGAAGCCTTCCCGGTCACCAAGGTCATCATCGCAGAGGGCAAA GAAGACATTACCATCAAGATTTCCGATGAAGGTGGTGGCATCCCCCGTTCCGCCATCCCCTTGGTCTGGACGTAT ATGTACACTACCGTAGAGCAAACTCCTAGCCTGGATCCCGATTTTGACAAGAGTGACTTCAAGGCTCCCATGGCT GGCTTTGGGTACGGTCTGCCAATTAGCCGACTGTATGCTCGCTACTTTGGTGGCGATCTGAAGCTGATCAGTATG GAAGGGTATGGCACGGACGTCTATCTCCATCTTAACCGACTCTCTTCGAGCTCGGAGCCCCTGCAATGA |
Transcript | >Ani_SJS100_1|g8088.t1 ATGGGGCAATACAGATCTGCGAGGGTAGCAGCAGCAGCGCAGGCGATTCACGGAGTATTTGAGCCCGGACGGTTC CTGCTTTTCCCTATGACCGGGTGGTGCGATGGGCAAGATCCAAAGAGTGGCTCCGAATCGGCAGAGGAAATAGCA ACATCCTCGGCCAAGCACGGGATCGCAGACGGCAACTGCCCCCCACCAGCGCACGTGACCAGTGACTCCCCGGGA ATCGCGAGTCTCCGCAGCAGCCCATCCAAAAAGAGTCATCCTCCACCGGTCGCTCCTGCCCACTTCCCTCCGCCC TTTCTCTGCGAGGCACCATTCCGGGGATCTTCATACCGCCCGCCGTTCCGAGCTCGTCTGCGAGCGGAGGTGTCC CTCAACCTCGCTGCTCTCGATCATTTGGAGCACTTGTGGAATTCATATTGGTTGTATCGAGTGCTATTCCAGGCC GTCTGGCCTGATCCTCGCGTTGACATCATGTGGAAGCCGTCGGAGAGCCTGATGAACACCATCAGACATTATGCC AGCTTCCCTGCAACTGGTGTCTCTCTCCGGCAGATGGTGCAGTTTGGAGATAGACCCTCCACAGGCACCCTCTTT CGCGCCTCACAATTCCTTTCCGAAGAACTCCCAATACGCCTCGCTCATCGTGTTCAGGATCTTGGAGAACTTCCA GATGGACTCAGTGAAATGCCATCTATCAAGAAGGTCCAGGACTGGTACGCACAGTCGTTCGAGGAAATCATTAAC CTCCCCCGACCTACTCTGACCCAGGAAGTCAAGACTCGTCTGCTTCGTCCGGGGAGGCTCAACGGAGGCACTTCG AGGATCCTCTCCGAAACAACCCAGAACCCTAGCATCCGTGAAGGACAATATCGGTCGTCTCCCTCGTCCCTGTTG AATGGCAACGGCAACGGTAAAGGCGCCGCCGTGGGCCGAAGATACTATGCTCCATCTGACGACCACGGAGATTGG CCGCCAGAACTGAATGATTACAATGAACGCTTCGCCAAGACTTTGCAGCACATCAAGCGGAGACACGACAGTGTT GTAACTACCGTGGCTCAAGGTATTCTTGAATGGAAACGAAAGCGTCAACGTCTGCAGATTGATTCCACCGTCCAG TCCTTCCTCGATCGGTTCTACATGTCTCGGATTGGTATACGAATGTTGATTGGTCAACACATCGCCTTAACAGAA CAAACGCATGTGCGACAACCAAACTATGTCGGTATCATTTGTACGAAAACCAATGTGCGCGAGGTGGCCCTCGAG GCTATCGACAACGCTCGCTTCGTTTGTGAGGATTACTATGGCCTGTTTGATGCTCCCAAAGTGCAACTTGTCTGC AAGGACGATCTGAACTTCATGTATGTTCCGGGTCACTTGTCCCATATGCTCTTTGAAACCTTGAAGAACTCCCTG CGTGCTGTCGTGGAAGCCCACGGCGCAGACAAGGAAGCCTTCCCGGTCACCAAGGTCATCATCGCAGAGGGCAAA GAAGACATTACCATCAAGATTTCCGATGAAGGTGGTGGCATCCCCCGTTCCGCCATCCCCTTGGTCTGGACGTAT ATGTACACTACCGTAGAGCAAACTCCTAGCCTGGATCCCGATTTTGACAAGAGTGACTTCAAGGCTCCCATGGCT GGCTTTGGGTACGGTCTGCCAATTAGCCGACTGTATGCTCGCTACTTTGGTGGCGATCTGAAGCTGATCAGTATG GAAGGGTATGGCACGGACGTCTATCTCCATCTTAACCGACTCTCTTCGAGCTCGGAGCCCCTGCAATGA |
Gene | >Ani_SJS100_1|g8088.t1 ATGGGGCAATACAGATCTGCGAGGGTAGCAGCAGCAGCGCAGGCGATTCACGGAGTATTTGAGCCCGGACGGTTC CTGCTTTTCCCTATGACCGGGTGGTGCGATGGGCAAGATCCAAAGAGTGGCTCCGAATCGGCAGAGGAAATAGCA ACATCCTCGGCCAAGCACGGGATCGCAGACGGCAACTGCCCCCCACCAGCGCACGTGACCAGTGACTCCCCGGGA ATCGCGAGTCTCCGCAGCAGCCCATCCAAAAAGAGTCATCCTCCACCGGTCGCTCCTGCCCACTTCCCTCCGCCC GTGCTCTCTTTCCTTTTTCTCTCTTTTCCCCAAACTAAAGATCTGGACCTTCTTGGCTGTTGTTGTGATTGTTGT TTGCTATCCATATTACCCCGTGGAGGCTCACCCCCCCGGTGTTTGATCCCCTTATATATCTCTCTGTCTCTTGCC CGCCGAGTTCCTAGTTTCTCTGCGAGGCACCATTCCGGGGATCTTCATACCGCCCGCCGTTCCGAGCTCGTCTGC GAGCGGAGGTGTCCCTCAACCTCGGTAGTCCTTCTCCCACTTCCCACTCTCCTCGACTGTCACAATTGACTGACC AAGTATTCTACCAGCTGCTCTCGATCATTTGGAGCACTTGTGGAATTCATATTGGTTGTATCGAGTGCTATTCCA GGCCGTCTGGCCTGATCCTCGCGTTGACATCATGTGGAAGCCGTCGGAGAGCCTGATGAACACCATCAGACATTA TGCCAGCTTCCCTGCAACTGGTGTCTCTCTCCGGCAGATGGTGCAGTTTGGAGATAGACCCTCCACAGGTAAGTC TTCTTCTTCTCAATCGGAAGCCCTCTCGCTCTTCCAACTCCTCGAGTCGAGTGACCACCGCCCGCTAACCTCGTG ATCTTCTCCCGCACCAGGCACCCTCTTTCGCGCCTCACAATTCCTTTCCGAAGAACTCCCAATACGCCTCGCTCA TCGTGTTCAGGATCTTGGAGAACTTCCAGATGGACTCAGTGAAATGCCATCTATCAAGAAGGTCCAGGACTGGTA CGCACAGTCGTTCGAGGTATGACTCATACTCGCGGGAGTTGGTTCTCGGGTGGATGACTGACATGTGATAATGTA GGAAATCATTAACCTCCCCCGACCTACTCTGACCCAGGAAGTCAAGACTCGTCTGCTTCGTCCGGGGAGGCTCAA CGGAGGCACTTCGAGGATCCTCTCCGAAACAACCCAGAACCCTAGCATCCGTGAAGGACAATATCGGTCGTCTCC CTCGTCCCTGTTGAATGGCAACGGCAACGGTAAAGGCGCCGCCGTGGGCCGAAGATACTATGCTCCATCTGACGA CCACGGAGATTGGCCGCCAGAACTGAATGATTACAATGAACGCTTCGCCAAGACTTTGCAGCACATCAAGCGGAG ACACGACAGTGTTGTAACTACCGTGGCTCAAGGTATTCTTGAATGGAAACGAAAGCGTCAACGTCTGCAGATTGA TTCCACCGTCCAGTCCTTCCTCGATCGGTTCTACATGTCTCGGATTGGTATACGAATGTTGATTGGTCAACACAT CGCCTTAACAGAACAAACGCATGTGCGACAACCAAACTATGTCGGTATCATTTGTACGAAAACCAATGTGCGCGA GGTGGCCCTCGAGGCTATCGACAACGCTCGCTTCGTTTGTGAGGATTACTATGGCCTGTTTGATGCTCCCAAAGT GCAACTTGTCTGCAAGGACGATCTGAACTTCATGTATGTTCCGGGTCACTTGTCCCATATGCTCTTTGAAACCTT GAAGAACTCCCTGCGTGCTGTCGTGGAAGCCCACGGCGCAGACAAGGAAGCCTTCCCGGTCACCAAGGTCATCAT CGCAGAGGGCAAAGAAGACATTACCATCAAGATTTCCGATGAAGGTGGTGGCATCCCCCGTTCCGCCATCCCCTT GGTCTGGACGTATATGTACACTACCGTAGAGCAAACTCCTAGCCTGGATCCCGATTTTGACAAGAGTGACTTCAA GGCTCCCATGGCTGGCTTTGGGTACGGTCTGCCAATTAGCCGACTGTATGCTCGCTACTTTGGTGGCGATCTGAA GCTGATCAGTATGGAAGGGTGAGTGCCAAGTTCCCGCGCCGGCATTATTGTGAACGAATCAAGGCCACTAACCAG ACACTAGGTATGGCACGGACGTCTATCTCCATCTTAACCGACTCTCTTCGAGCTCGGAGCCCCTGCAATGA |