Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8067.t1
Gene name
Locationscaffold_060:155347..156590
Strand+
Gene length (bp)1243
Transcript length (bp)1011
Coding sequence length (bp)1011
Protein length (aa) 337

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02104 SURF1 SURF1 family 1.4E-53 95 309

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 87 109 22
2 300 319 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8067.t1
MRSLLSVLSRTGSRTTPLRPTSSILRTALNRTGTAAGPDSLCTRCLRRTNNTTQLRFYNNNQFTDDQRWLSVVDA
PSQVVRTGRKHGPGLIILALIPIISFALGTWQIQRLEWKTNLIAKFEDRLIKPPLPLPPRVDPSAISEFDYRRVV
ATGTLRHDQEMLVGPRMREGQDGFFVVTPLEREGGSTVLVNRGWISRKMKEKRDRLRQGEGRALPEGEVVVEGLL
REPWKKNMFTPDNVPAEGKFYFPDIEQMAELTGSQPVWIEETMVPDMVEAMDREAKGIPIGRAAEVNLKNNHSQY
IFTWYGLSLATSIMLWMIIRKRPNEATRRVRQNRNW*
Coding >Ani_SJS100_1|g8067.t1
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTG
CGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCC
CCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC
TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTA
ATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC
GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTT
GTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG
GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTG
AGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT
GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCG
ATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGTAT
ATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAG
GCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
Transcript >Ani_SJS100_1|g8067.t1
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTG
CGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCC
CCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC
TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTA
ATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC
GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTT
GTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG
GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTG
AGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT
GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCG
ATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGTAT
ATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAG
GCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
Gene >Ani_SJS100_1|g8067.t1
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTG
CGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCC
CCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGGTGCGCTATAACCCCGTCCA
TTCCAACCTCATAACCATAGACTAACATACAATGATGAAATACAGCACTAATCCCCATAATCTCCTTCGCCCTCG
GAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCC
CGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGA
CGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGC
CGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGG
ATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGT
GGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATTGAGCAGATGG
CGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGGTATGTTATTCTTCCTGCTTCACTTTGTCC
TTTCGACTTGGTTTGGCTTCGGCTATGTATTGGGATGAAGAAGCTAATCTAGGATGCTGGATCAGTCCCCGATAT
GGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCA
CAGTCAGTATATCTTTACTTGGTAGGTTTCCCTTCCTCCGTTCCTCCCCGGATGCTGCATGGCTGCCTGGGATCC
TGGCTAACGGCTGCGCAGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCC
CAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail