© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8067.t1 |
| Gene name | |
| Location | scaffold_060:155347..156590 |
| Strand | + |
| Gene length (bp) | 1243 |
| Transcript length (bp) | 1011 |
| Coding sequence length (bp) | 1011 |
| Protein length (aa) | 337 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02104 | SURF1 | SURF1 family | 1.4E-53 | 95 | 309 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 87 | 109 | 22 |
| 2 | 300 | 319 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8067.t1 MRSLLSVLSRTGSRTTPLRPTSSILRTALNRTGTAAGPDSLCTRCLRRTNNTTQLRFYNNNQFTDDQRWLSVVDA PSQVVRTGRKHGPGLIILALIPIISFALGTWQIQRLEWKTNLIAKFEDRLIKPPLPLPPRVDPSAISEFDYRRVV ATGTLRHDQEMLVGPRMREGQDGFFVVTPLEREGGSTVLVNRGWISRKMKEKRDRLRQGEGRALPEGEVVVEGLL REPWKKNMFTPDNVPAEGKFYFPDIEQMAELTGSQPVWIEETMVPDMVEAMDREAKGIPIGRAAEVNLKNNHSQY IFTWYGLSLATSIMLWMIIRKRPNEATRRVRQNRNW* |
| Coding | >Ani_SJS100_1|g8067.t1 ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTG CGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCC CCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTA ATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTT GTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTG AGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCG ATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGTAT ATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAG GCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG |
| Transcript | >Ani_SJS100_1|g8067.t1 ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTG CGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCC CCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTA ATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTT GTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTG AGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCG ATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGTAT ATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAG GCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG |
| Gene | >Ani_SJS100_1|g8067.t1 ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTG CGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCC CCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGGTGCGCTATAACCCCGTCCA TTCCAACCTCATAACCATAGACTAACATACAATGATGAAATACAGCACTAATCCCCATAATCTCCTTCGCCCTCG GAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCC CGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGA CGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGC CGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGG ATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGT GGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATTGAGCAGATGG CGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGGTATGTTATTCTTCCTGCTTCACTTTGTCC TTTCGACTTGGTTTGGCTTCGGCTATGTATTGGGATGAAGAAGCTAATCTAGGATGCTGGATCAGTCCCCGATAT GGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCA CAGTCAGTATATCTTTACTTGGTAGGTTTCCCTTCCTCCGTTCCTCCCCGGATGCTGCATGGCTGCCTGGGATCC TGGCTAACGGCTGCGCAGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCC CAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG |