Protein ID | Ani_SJS100_1|g8044.t1 |
Gene name | |
Location | scaffold_060:100558..102099 |
Strand | - |
Gene length (bp) | 1541 |
Transcript length (bp) | 1410 |
Coding sequence length (bp) | 1410 |
Protein length (aa) | 470 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12710 | HAD | haloacid dehalogenase-like hydrolase | 1.0E-21 | 251 | 422 |
PF00702 | Hydrolase | haloacid dehalogenase-like hydrolase | 2.3E-20 | 249 | 426 |
PF08282 | Hydrolase_3 | haloacid dehalogenase-like hydrolase | 2.9E-07 | 390 | 432 |
Orthofinder run ID | 3 |
Orthogroup | 8265 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8044.t1 MAAPNPTNNGRPTRPVLRQTLSSASFIQDHQQYKPSAPIQTIGNVIGNSPESAFAALSVKANPISPDPEKVTDSG IIHSIFNQQTNELPTGTQQLVATIYYKSADPIHPHLHPDSSPHVGSGQTLPSPMVPVGSAPTVDIEKIPREPPAP EPEPLDHLYGPFVSQLCLTNFLQIIETLPTPYQRTNTSHRCLDRHDQPRVVEVTFSPPPNPEYLTFEDLRKHESI WRFEREWNVEVVLQRESIFRRHKRLVVFDMDSTLIQNEVIDEIAKFIGVEKEVSEITARAMNGELDFSASLRERV SLLKGVPADVFEKLKSIITISPGARELCKALKTLGCKMAVLSGGFQPLAEWLAEQLGLDYAHANHLEIDPTTQTL TGKLVPTYPIIDANQKRSILHSIAAEHGIPISQTVAVGDGANDLLMLHAAGLGVAWRAKSKVQLEAPTRLNGESL VDVLYLLGLTKDDISELIA* |
Coding | >Ani_SJS100_1|g8044.t1 ATGGCAGCGCCCAACCCCACCAACAACGGCCGTCCAACGCGGCCGGTATTGCGACAGACCCTGTCCAGCGCATCC TTCATCCAGGATCATCAGCAGTACAAACCCTCTGCCCCCATTCAGACCATCGGCAACGTGATTGGCAACTCCCCT GAGTCAGCGTTTGCTGCGCTGTCCGTCAAAGCTAATCCCATTAGCCCCGATCCCGAGAAGGTGACCGACAGTGGC ATTATCCACAGCATCTTCAACCAGCAGACCAATGAACTGCCTACTGGAACACAGCAGCTGGTCGCTACGATCTAC TACAAGTCTGCTGACCCTATCCATCCCCATCTGCACCCCGATTCCTCCCCTCATGTCGGATCTGGCCAAACTCTG CCATCACCCATGGTACCCGTAGGTTCCGCCCCGACGGTCGATATTGAGAAGATCCCACGGGAGCCTCCCGCCCCA GAGCCGGAGCCGCTCGACCATCTGTACGGTCCGTTTGTATCGCAGCTCTGCCTGACCAACTTCCTTCAAATCATC GAAACCCTTCCGACCCCGTATCAGCGCACCAACACTTCGCATCGCTGCTTGGATCGTCACGACCAGCCTCGCGTC GTCGAAGTTACCTTCTCGCCTCCTCCCAACCCGGAATACCTCACCTTTGAGGACCTGCGGAAGCATGAGAGCATA TGGCGATTCGAGCGTGAATGGAATGTGGAGGTTGTCCTCCAGCGGGAGAGCATCTTCCGTCGGCACAAGCGGTTG GTAGTGTTCGATATGGACAGTACATTGATTCAGAATGAGGTGATCGATGAGATTGCCAAGTTCATCGGCGTGGAG AAGGAGGTTTCGGAAATCACGGCTCGTGCTATGAACGGCGAGCTGGACTTCTCCGCATCTCTCCGGGAGCGGGTT AGCCTGCTGAAGGGCGTTCCTGCGGATGTCTTCGAGAAGCTGAAGTCCATCATCACAATCTCTCCAGGTGCGCGC GAGCTGTGTAAGGCACTGAAGACCCTCGGCTGCAAAATGGCAGTCTTGAGTGGTGGCTTTCAGCCTCTTGCGGAG TGGCTTGCCGAACAGCTTGGACTTGACTACGCGCATGCCAACCATCTCGAGATCGATCCTACAACGCAAACTCTG ACCGGCAAATTGGTCCCCACATACCCCATCATCGATGCAAACCAGAAGCGCTCGATTCTTCACTCGATTGCCGCG GAGCATGGCATTCCTATCTCCCAAACTGTCGCTGTTGGTGACGGAGCCAATGATCTGCTTATGCTGCACGCAGCA GGATTGGGTGTTGCGTGGCGGGCCAAGAGCAAGGTGCAGCTCGAGGCACCGACCCGTCTTAATGGCGAGAGCCTC GTAGATGTCCTCTACCTCCTTGGCCTGACTAAGGATGACATTTCCGAGCTGATTGCGTAG |
Transcript | >Ani_SJS100_1|g8044.t1 ATGGCAGCGCCCAACCCCACCAACAACGGCCGTCCAACGCGGCCGGTATTGCGACAGACCCTGTCCAGCGCATCC TTCATCCAGGATCATCAGCAGTACAAACCCTCTGCCCCCATTCAGACCATCGGCAACGTGATTGGCAACTCCCCT GAGTCAGCGTTTGCTGCGCTGTCCGTCAAAGCTAATCCCATTAGCCCCGATCCCGAGAAGGTGACCGACAGTGGC ATTATCCACAGCATCTTCAACCAGCAGACCAATGAACTGCCTACTGGAACACAGCAGCTGGTCGCTACGATCTAC TACAAGTCTGCTGACCCTATCCATCCCCATCTGCACCCCGATTCCTCCCCTCATGTCGGATCTGGCCAAACTCTG CCATCACCCATGGTACCCGTAGGTTCCGCCCCGACGGTCGATATTGAGAAGATCCCACGGGAGCCTCCCGCCCCA GAGCCGGAGCCGCTCGACCATCTGTACGGTCCGTTTGTATCGCAGCTCTGCCTGACCAACTTCCTTCAAATCATC GAAACCCTTCCGACCCCGTATCAGCGCACCAACACTTCGCATCGCTGCTTGGATCGTCACGACCAGCCTCGCGTC GTCGAAGTTACCTTCTCGCCTCCTCCCAACCCGGAATACCTCACCTTTGAGGACCTGCGGAAGCATGAGAGCATA TGGCGATTCGAGCGTGAATGGAATGTGGAGGTTGTCCTCCAGCGGGAGAGCATCTTCCGTCGGCACAAGCGGTTG GTAGTGTTCGATATGGACAGTACATTGATTCAGAATGAGGTGATCGATGAGATTGCCAAGTTCATCGGCGTGGAG AAGGAGGTTTCGGAAATCACGGCTCGTGCTATGAACGGCGAGCTGGACTTCTCCGCATCTCTCCGGGAGCGGGTT AGCCTGCTGAAGGGCGTTCCTGCGGATGTCTTCGAGAAGCTGAAGTCCATCATCACAATCTCTCCAGGTGCGCGC GAGCTGTGTAAGGCACTGAAGACCCTCGGCTGCAAAATGGCAGTCTTGAGTGGTGGCTTTCAGCCTCTTGCGGAG TGGCTTGCCGAACAGCTTGGACTTGACTACGCGCATGCCAACCATCTCGAGATCGATCCTACAACGCAAACTCTG ACCGGCAAATTGGTCCCCACATACCCCATCATCGATGCAAACCAGAAGCGCTCGATTCTTCACTCGATTGCCGCG GAGCATGGCATTCCTATCTCCCAAACTGTCGCTGTTGGTGACGGAGCCAATGATCTGCTTATGCTGCACGCAGCA GGATTGGGTGTTGCGTGGCGGGCCAAGAGCAAGGTGCAGCTCGAGGCACCGACCCGTCTTAATGGCGAGAGCCTC GTAGATGTCCTCTACCTCCTTGGCCTGACTAAGGATGACATTTCCGAGCTGATTGCGTAG |
Gene | >Ani_SJS100_1|g8044.t1 ATGGCAGCGCCCAACCCCACCAACAACGGCCGTCCAACGCGGCCGGTATTGCGACAGACCCTGTCCAGCGCATCC TTCATCCAGGATCATCAGCAGTACAAACCCTCTGCCCCCATTCAGACCATCGGCAACGTGATTGGCAACTCCCCT GAGTCAGCGTTTGCTGCGCTGTCCGTCAAAGCTAATCCCATTAGCCCCGATCCCGAGAAGGTGACCGACAGTGGC ATTATCCACAGCATCTTCAACCAGCAGACCAATGAACTGCCTACTGGAACACAGCAGCTGGTCGCTACGATCTAC TACAAGTCTGCTGACCCTATCCATCCCCATCTGCACCCCGATTCCTCCCCTCATGTCGGATCTGGCCAAACTCTG CCATCACCCATGGTACCCGTAGGTTCCGCCCCGACGGTCGATATTGAGAAGATCCCACGGGAGCCTCCCGCCCCA GAGCCGGAGCCGCTCGACCATCTGTACGGTCCGTTTGTATCGCAGCTCTGCCTGACCAACTTCCTTCAAATCATC GAAACCCTTCCGACCCCGTATCAGCGCACCAACACTTCGCATCGCTGCTTGGATCGTCACGACCAGCCTCGCGTC GTCGAAGTTACCTTCTCGCCTCCTCCCAACCCGGAATACCTCACCTTTGAGGACCTGCGGAAGCATGAGAGCATA TGGCGATTCGAGCGTGAATGGAATGTGGAGGTTGTCCTCCAGCGGGAGAGCATCTTCCGTCGGCACAAGCGGTTG GTAGTGTTCGATATGGACAGTACATTGATTCAGAATGAGGTGATCGATGAGATTGCCAAGTTCATCGGCGTGGAG AAGGAGGTTTCGGTTCGTACCTTCTTCAAATAATGATGGCAAGGGGCTGTATATGCTGATATTGATGGCAGGAAA TCACGGCTCGTGCTATGAACGGCGAGCTGGACTTCTCCGCATCTCTCCGGGAGCGGGTTAGCCTGCTGAAGGGCG TTCCTGCGGATGTCTTCGAGAAGCTGAAGTCCATCATCACAATCTCTCCAGGTGCGCGCGAGCTGTGTAAGGCAC TGAAGACCCTCGGCTGCAAAATGGCAGTCTTGAGTGGTGGCTTTCAGCCTCTTGCGGAGTGGCTTGCCGAACAGC TTGGACTTGACTACGCGCATGCCAACCATGTATGTGATGCGACACCTGACCCGTCGAAACTGTTTTGTATGTTTT GATTGTGTACTAATTGACTGTTCCAGCTCGAGATCGATCCTACAACGCAAACTCTGACCGGCAAATTGGTCCCCA CATACCCCATCATCGATGCAAACCAGAAGCGCTCGATTCTTCACTCGATTGCCGCGGAGCATGGCATTCCTATCT CCCAAACTGTCGCTGTTGGTGACGGAGCCAATGATCTGCTTATGCTGCACGCAGCAGGATTGGGTGTTGCGTGGC GGGCCAAGAGCAAGGTGCAGCTCGAGGCACCGACCCGTCTTAATGGCGAGAGCCTCGTAGATGTCCTCTACCTCC TTGGCCTGACTAAGGATGACATTTCCGAGCTGATTGCGTAG |