Protein ID | Ani_SJS100_1|g8040.t1 |
Gene name | |
Location | scaffold_060:90185..91701 |
Strand | + |
Gene length (bp) | 1516 |
Transcript length (bp) | 1374 |
Coding sequence length (bp) | 1374 |
Protein length (aa) | 458 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02598 | Methyltrn_RNA_3 | Putative RNA methyltransferase | 3.9E-115 | 77 | 437 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 41 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8040.t1 MNKCSSLKVSSSSSTSPSRPSASPSSSGRPEMRRPNYKRRKTTHEDSPPSHHNGITGPLFTEKPSAVFTPKGGRS HTLSVAIPGSIITNAHSVEQKTFLAGVIARALAVFCVDEVVVFDDNEYGAHCDYYDHRDSYNSPIAKTRDQVDGD TSSPKAYTANSDPSHFLTHVLSYLETPPYLRKHLFRIHPNLRTAGLLPSLDMPHHLRANEWCDFREGIVVSSSAR KNNPASKITQMSKDHPFHRRNSSTNNGPATIVDTGLSQKIVLPNIHLPEHARVTVRFPQHEFPYAEPVHPSTPRA EAGYYWGYYVRRCRSLSSVFTECPYDGGYDLSFGTSERGVPVSAVLEEKPQQAHDRYKQGHSFCRDQISPDFQHI LVVFGGVAGIEAAVRNDPQLRDMAIRPSDAGKLFDYWVNFLPGQGSRTIRTEEAVWMGLTSLQGLLDGTHRLRKA YRCHHDG* |
Coding | >Ani_SJS100_1|g8040.t1 ATGAACAAGTGTTCGTCCCTGAAAGTTTCTTCTTCGTCCTCCACTTCCCCTTCTCGCCCATCTGCATCGCCTTCT TCTTCCGGCCGCCCTGAAATGCGCCGTCCCAACTATAAGAGACGCAAGACTACCCATGAAGATAGTCCTCCTTCG CACCACAATGGCATAACCGGTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCGATCG CATACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAACGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCC GGTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGGCGCC CACTGTGATTATTATGACCATAGAGACTCCTATAACTCACCCATTGCCAAAACTAGAGACCAAGTTGATGGCGAT ACATCCTCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTATCTTGAG ACTCCACCATATTTGCGCAAACATCTCTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTG GACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCAGCGCGG AAAAATAACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATCATCCTTTCCACCGTCGTAACAGCTCTACTAAT AATGGCCCTGCCACAATAGTTGACACGGGTCTCTCACAGAAAATAGTTCTCCCAAACATCCACCTCCCAGAACAT GCCCGAGTCACTGTTCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCGGTACACCCATCCACCCCTCGTGCC GAAGCGGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCTCTCTTCCGTTTTTACGGAATGTCCCTAT GACGGTGGCTACGATCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCA CAACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGACTTCCAGCATATT CTTGTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATC CGCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCAGAACCATCCGC ACTGAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCA TACCGATGTCATCACGACGGTTAG |
Transcript | >Ani_SJS100_1|g8040.t1 ATGAACAAGTGTTCGTCCCTGAAAGTTTCTTCTTCGTCCTCCACTTCCCCTTCTCGCCCATCTGCATCGCCTTCT TCTTCCGGCCGCCCTGAAATGCGCCGTCCCAACTATAAGAGACGCAAGACTACCCATGAAGATAGTCCTCCTTCG CACCACAATGGCATAACCGGTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCGATCG CATACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAACGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCC GGTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGGCGCC CACTGTGATTATTATGACCATAGAGACTCCTATAACTCACCCATTGCCAAAACTAGAGACCAAGTTGATGGCGAT ACATCCTCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTATCTTGAG ACTCCACCATATTTGCGCAAACATCTCTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTG GACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCAGCGCGG AAAAATAACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATCATCCTTTCCACCGTCGTAACAGCTCTACTAAT AATGGCCCTGCCACAATAGTTGACACGGGTCTCTCACAGAAAATAGTTCTCCCAAACATCCACCTCCCAGAACAT GCCCGAGTCACTGTTCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCGGTACACCCATCCACCCCTCGTGCC GAAGCGGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCTCTCTTCCGTTTTTACGGAATGTCCCTAT GACGGTGGCTACGATCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCA CAACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGACTTCCAGCATATT CTTGTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATC CGCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCAGAACCATCCGC ACTGAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCA TACCGATGTCATCACGACGGTTAG |
Gene | >Ani_SJS100_1|g8040.t1 ATGAACAAGTGTTCGTCCCTGAAAGTTTCTTCTTCGTCCTCCACTTCCCCTTCTCGCCCATCTGCATCGCCTTCT TCTTCCGGCCGCCCTGAAATGCGCCGTCCCAACTATAAGGTATGTCGATGACAGCTTGTACCTCCTTGTAATAGC AATCAGTATCTGACGTGAGAAAATGTGGTACATATAGAGACGCAAGACTACCCATGAAGATAGTCCTCCTTCGCA CCACAATGGCATAACCGGTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCGATCGCA TACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAAGTAAACCCCCCTTGACAAATGCTTCCCAGGGGCTGC TGGTGTATATGACCGCTAACAGATGCTGCGCAGCGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCCGGTGTAAT CGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGGCGCCCACTGTGA TTATTATGACCATAGAGACTCCTATAACTCACCCATTGCCAAAACTAGAGACCAAGTTGATGGCGATACATCCTC TCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTATCTTGAGACTCCACC ATATTTGCGCAAACATCTCTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTGGACATGCC TCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCAGCGCGGAAAAATAA CCCGGCCAGCAAGATCACTCAGATGAGCAAAGATCATCCTTTCCACCGTCGTAACAGCTCTACTAATAATGGCCC TGCCACAATAGTTGACACGGGTCTCTCACAGAAAATAGTTCTCCCAAACATCCACCTCCCAGAACATGCCCGAGT CACTGTTCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCGGTACACCCATCCACCCCTCGTGCCGAAGCGGG TTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCTCTCTTCCGTTTTTACGGAATGTCCCTATGACGGTGG CTACGATCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACAACAAGC ACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGACTTCCAGCATATTCTTGTCGT CTTCGGTGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCGCCCATC CGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCAGAACCATCCGCACTGAAGA AGCCGTTTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATACCGATG TCATCACGACGGTTAG |