© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8023.t1 |
| Gene name | |
| Location | scaffold_060:42433..44825 |
| Strand | - |
| Gene length (bp) | 2392 |
| Transcript length (bp) | 1701 |
| Coding sequence length (bp) | 1701 |
| Protein length (aa) | 567 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 8.4E-120 | 26 | 523 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.8E-11 | 30 | 245 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.4E-10 | 326 | 518 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 66 | 87 | 21 |
| 3 | 94 | 116 | 22 |
| 4 | 120 | 142 | 22 |
| 5 | 149 | 171 | 22 |
| 6 | 223 | 240 | 17 |
| 7 | 321 | 343 | 22 |
| 8 | 358 | 380 | 22 |
| 9 | 387 | 409 | 22 |
| 10 | 424 | 446 | 22 |
| 11 | 459 | 477 | 18 |
| 12 | 487 | 509 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8023.t1 MASSTQNPNGGFALIYQNPYLLGVASFSTLGGLLFGYDQGVVSGVITMQSFGARFPRVYMDSSFKGWFVSTLLIS AWFGSLINGPIVDRIGRKLSIITAVVVFVVGSAIQCGAVNIPMLFAGRAIAGVAVGQLTMVVPLYISEVSIPEIR GGLVVLQQLSVTIGILISYWIDYGTNYIGGTRCAPNIPYTGGTASSPSFDPYTDIPSDGICTGQSEASWRLPLAI QIIPALTLGLGMLFFPDSPRWLLMKERDDEALQALSRLRRQSTNNPDLTNEYLEIKASIMLENSFARERFPELSG FRLHAAQYISLVTTWARFKRLAIGCCIMFFQQFMGCNAIIYYAPTIFAQLGLDGNTSSLLATGVYGIINCLSTLP ALFLIDKVGRRGLLMSGATGTCISLVIVGAIIGVYGSDLVHHRSAGWAGIAFIYIYDINFSYSFAPIGWVLPSEI FNLSIRSKAISITTSATWMCNFIIGLVTPDMLDSITWGTYIFFAAFCLLAFGFTFFFIPETRGKTLEDMDLIFGD TAAHEEKQRIVGIEAQLRGIDGPTVDPEFVKPFAQEEEDVA* |
| Coding | >Ani_SJS100_1|g8023.t1 ATGGCCTCCAGTACTCAGAATCCCAATGGCGGTTTCGCCTTGATATACCAAAACCCCTACCTGCTGGGCGTTGCA TCGTTCTCCACCTTAGGTGGGCTGCTCTTTGGCTATGATCAGGGCGTGGTTTCCGGTGTGATAACCATGCAATCA TTCGGCGCTCGATTCCCTCGAGTATACATGGACAGCAGCTTCAAGGGGTGGTTTGTGTCGACCCTATTAATCTCT GCTTGGTTTGGCTCCCTCATCAACGGCCCTATCGTAGACCGAATAGGCCGCAAACTATCCATCATCACCGCTGTC GTTGTATTCGTCGTTGGGTCCGCCATCCAATGCGGTGCCGTTAATATACCAATGCTCTTTGCTGGACGTGCAATC GCAGGCGTAGCCGTTGGGCAACTAACCATGGTGGTACCTCTGTATATCTCCGAAGTCTCCATTCCCGAAATACGC GGTGGTCTTGTCGTTCTCCAACAACTCTCCGTCACCATCGGCATCCTAATCAGTTACTGGATTGACTACGGCACA AACTACATCGGGGGCACCCGCTGCGCCCCCAATATTCCTTACACAGGCGGCACCGCCTCCTCCCCATCCTTTGAT CCCTACACAGACATCCCCTCCGACGGCATCTGCACCGGCCAATCCGAAGCATCCTGGCGTCTACCACTAGCCATC CAGATCATCCCAGCCCTTACACTCGGCCTGGGGATGCTCTTTTTCCCAGACTCCCCTAGATGGCTACTAATGAAA GAACGAGACGACGAAGCTCTCCAGGCACTTTCCAGGCTACGTCGACAATCTACAAACAACCCAGACCTAACAAAC GAATACCTCGAGATCAAAGCATCCATCATGTTAGAGAACAGTTTCGCTAGAGAACGGTTCCCGGAGTTATCTGGG TTCAGGCTGCATGCTGCGCAGTATATCTCACTCGTAACCACATGGGCGCGTTTCAAACGTCTAGCGATCGGATGC TGCATTATGTTCTTCCAGCAGTTTATGGGCTGTAACGCTATAATTTACTACGCACCAACAATTTTCGCTCAGCTG GGCCTCGATGGAAACACCAGCTCCCTCCTAGCCACCGGAGTCTACGGGATCATCAATTGCCTTAGCACCCTCCCT GCGCTTTTCCTAATCGACAAAGTCGGTCGAAGAGGTTTGCTCATGTCCGGTGCCACGGGGACCTGTATCTCGCTG GTAATCGTGGGTGCGATTATTGGGGTCTACGGATCGGATCTAGTCCATCATCGGTCTGCCGGATGGGCCGGGATC GCGTTCATCTATATCTACGATATCAACTTCTCATACTCTTTTGCTCCAATCGGATGGGTCCTGCCATCGGAAATC TTCAATCTATCCATACGCTCCAAAGCTATCTCCATCACAACTTCCGCTACTTGGATGTGTAACTTTATCATCGGC CTCGTCACCCCTGATATGCTTGACTCGATCACCTGGGGTACCTATATCTTTTTCGCAGCTTTCTGCCTCCTGGCA TTCGGGTTCACGTTCTTCTTTATCCCAGAGACCCGTGGAAAGACTCTGGAAGATATGGATCTCATCTTTGGTGAC ACGGCTGCCCATGAGGAAAAACAGCGTATTGTCGGAATCGAGGCTCAACTGCGTGGCATTGATGGTCCCACGGTC GACCCAGAATTCGTGAAGCCCTTCGCACAGGAGGAAGAGGACGTTGCTTGA |
| Transcript | >Ani_SJS100_1|g8023.t1 ATGGCCTCCAGTACTCAGAATCCCAATGGCGGTTTCGCCTTGATATACCAAAACCCCTACCTGCTGGGCGTTGCA TCGTTCTCCACCTTAGGTGGGCTGCTCTTTGGCTATGATCAGGGCGTGGTTTCCGGTGTGATAACCATGCAATCA TTCGGCGCTCGATTCCCTCGAGTATACATGGACAGCAGCTTCAAGGGGTGGTTTGTGTCGACCCTATTAATCTCT GCTTGGTTTGGCTCCCTCATCAACGGCCCTATCGTAGACCGAATAGGCCGCAAACTATCCATCATCACCGCTGTC GTTGTATTCGTCGTTGGGTCCGCCATCCAATGCGGTGCCGTTAATATACCAATGCTCTTTGCTGGACGTGCAATC GCAGGCGTAGCCGTTGGGCAACTAACCATGGTGGTACCTCTGTATATCTCCGAAGTCTCCATTCCCGAAATACGC GGTGGTCTTGTCGTTCTCCAACAACTCTCCGTCACCATCGGCATCCTAATCAGTTACTGGATTGACTACGGCACA AACTACATCGGGGGCACCCGCTGCGCCCCCAATATTCCTTACACAGGCGGCACCGCCTCCTCCCCATCCTTTGAT CCCTACACAGACATCCCCTCCGACGGCATCTGCACCGGCCAATCCGAAGCATCCTGGCGTCTACCACTAGCCATC CAGATCATCCCAGCCCTTACACTCGGCCTGGGGATGCTCTTTTTCCCAGACTCCCCTAGATGGCTACTAATGAAA GAACGAGACGACGAAGCTCTCCAGGCACTTTCCAGGCTACGTCGACAATCTACAAACAACCCAGACCTAACAAAC GAATACCTCGAGATCAAAGCATCCATCATGTTAGAGAACAGTTTCGCTAGAGAACGGTTCCCGGAGTTATCTGGG TTCAGGCTGCATGCTGCGCAGTATATCTCACTCGTAACCACATGGGCGCGTTTCAAACGTCTAGCGATCGGATGC TGCATTATGTTCTTCCAGCAGTTTATGGGCTGTAACGCTATAATTTACTACGCACCAACAATTTTCGCTCAGCTG GGCCTCGATGGAAACACCAGCTCCCTCCTAGCCACCGGAGTCTACGGGATCATCAATTGCCTTAGCACCCTCCCT GCGCTTTTCCTAATCGACAAAGTCGGTCGAAGAGGTTTGCTCATGTCCGGTGCCACGGGGACCTGTATCTCGCTG GTAATCGTGGGTGCGATTATTGGGGTCTACGGATCGGATCTAGTCCATCATCGGTCTGCCGGATGGGCCGGGATC GCGTTCATCTATATCTACGATATCAACTTCTCATACTCTTTTGCTCCAATCGGATGGGTCCTGCCATCGGAAATC TTCAATCTATCCATACGCTCCAAAGCTATCTCCATCACAACTTCCGCTACTTGGATGTGTAACTTTATCATCGGC CTCGTCACCCCTGATATGCTTGACTCGATCACCTGGGGTACCTATATCTTTTTCGCAGCTTTCTGCCTCCTGGCA TTCGGGTTCACGTTCTTCTTTATCCCAGAGACCCGTGGAAAGACTCTGGAAGATATGGATCTCATCTTTGGTGAC ACGGCTGCCCATGAGGAAAAACAGCGTATTGTCGGAATCGAGGCTCAACTGCGTGGCATTGATGGTCCCACGGTC GACCCAGAATTCGTGAAGCCCTTCGCACAGGAGGAAGAGGACGTTGCTTGA |
| Gene | >Ani_SJS100_1|g8023.t1 ATGGCCTCCAGTACTCAGAATCCCAATGGCGGTTTCGCCTTGATATACCAAAACCCCTACCTGCTGGGCGTTGCA TCGGTGAGTTTTCATATACCCAAGAAGAACCAGACATTGTTCTGACCCGATCCAACATCTACTAGTTCTCCACCT TAGGTGGGCTGCTCTTTGGCTATGATCAGGGCGTGGTTTCCGGTGTGATAACCATGCAATCATTCGGCGCTCGAT TCCCTCGAGTATACATGGACAGCAGCTTCAAGGGGTGGTTTGTGTCGACCCTATTAATCTGTATGCCGCGTCCTG CTTTGCCAATTATTTCACCATAATGAACGAATGCTCACTCACTGTATCAATAGCTGCTTGGTTTGGCTCCCTCAT CAACGGCCCTATCGTAGACCGAATAGGCCGCAAACTATCCATCATCACCGCTGTCGTTGTATTCGTCGTTGGGTC CGCCATCCAATGCGGTGCCGTTAATATACCAATGCTCTTTGCTGGTATGCATCCTTGCTTGGACATTGCCAATAC CCTTTCCCAGACTACCGCTTACACGCCACAGGACGTGCAATCGCAGGCGTAGCCGTTGGGCAACTAACCATGGTG GTACCTCTGTATATCTCCGAAGTATGAACCTTCTCCCACACATTCAACACGATAACCATAGTACTCACCTTCACC CAACAGGTCTCCATTCCCGAAATACGCGGTGGTCTTGTCGTTCTCCAACAACGTGAGTAGTATCCCCTCACTCCA GTCCCATCTCACAACCACTAACCCAATCAGTCTCCGTCACCATCGGCATCCTAATCAGTTACTGGATTGACTACG GCACAAACTACATCGGGGGCACCCGCTGCGCCCCCAATATTCCTTACACAGGCGGCACCGCCTCCTCCCCATCCT TTGATCCCTACACAGACATCCCCTCCGACGGCATCTGCACCGGCCAATCCGAAGCATCCTGGCGTCTACCACTAG CCATCCAGATCATCCCAGCCCTTACACTCGGCCTGGGGATGCTCTTTTTCCCAGACTCCCCTAGATGGCTACTAA TGAAAGAACGAGACGACGAAGCTCTCCAGGCACTTTCCAGGCTACGTCGACAATCTACAAACAACCCAGACCTAA CAAACGAATACCTCGAGATCAAAGCATCCATCATGTTAGAGAACAGTTTCGCTAGAGAACGGTTCCCGGAGTTAT CTGGGTTCAGGCTGCATGCTGCGCAGGTTCGGTTTCCCCCCTCTCCCAATCCAACATTGAGCATCGTTCTAATTC ATCAATGACAATGATAGTATATCTCACTCGTAACCACATGGGCGCGTTTCAAACGTCTAGCGATCGGATGCTGCA TTATGTTCTTCCAGCAGTTTATGGGCTGTAACGGTATGCCATTTCCTCCCCTTCCCTCTTTCTTACCCATAATAT GAGCTAAAGTACCCCCACAGCTATAATTTACTACGCACCAACAATTTTCGCTCAGCTGGGCCTCGATGGAAACAC CGTACGCTTTAACCTTATCTTATTTATCTCAGGAGGAGCTGATGAGACTGACACGACCAAACAGAGCTCCCTCCT AGCCACCGGAGTCTACGGGATCATCAATTGCCTTAGCACCCTCCCTGCGCTTTTCCTAATCGACAAAGTCGGTCG AAGAGGTTTGCTCATGTCCGGTGCCACGGGGACCTGTATCTCGCTGGTAATCGTGGGTGCGATTATTGGGGTCTA CGGATCGGATCTAGTCCATCATCGGTCTGCCGGATGGGCCGGGATCGCGTTCATCTATATCTACGATATCAACTT CTCATACTCTTTTGGTTTGTTTAGTATGTTTCAGGTCTAAAGTGGATCTTGCTAATGCGCATATAGCTCCAATCG GATGGGTCCTGCCATCGGAAATCTTCAATCTATCCATACGCTCCAAAGCTATCTCCATCACAACTTCCGCTACTT GGATGTGTAACTTGTATGTTGAGGAAGTCCCATGTTTTTTTATCCAGTTTTTTTAAATCGTGATGGTCATGACTC ATTCTCGACATTTGCACCTAGTATCATCGGCCTCGTCACCCCTGATATGCTTGACTCGATCACCTGGGGTACCTA TATCTTTTTCGCAGCTTTCTGCCTCCTGGCATTCGGGTTCACGTTCTTCTTTATCCCAGAGACCCGTGGAAAGGT ATGCTTGGGTTGCCCTTGGCTATCTTTTAGACGTCACTAACATGGCTACCTTGTTTAGACTCTGGAAGATATGGA TCTCATCTTTGGTGACACGGCTGCCCATGAGGAAAAACAGCGTATTGTCGGAATCGAGGCTCAACTGCGTGGCAT TGATGGTCCCACGGTCGACCCAGAATTCGTGAAGCCCTTCGCACAGGAGGAAGAGGACGTTGCTTGA |