© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8015.t1 |
| Gene name | |
| Location | scaffold_060:14392..15594 |
| Strand | - |
| Gene length (bp) | 1202 |
| Transcript length (bp) | 1092 |
| Coding sequence length (bp) | 1092 |
| Protein length (aa) | 364 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02774 | Semialdhyde_dhC | Semialdehyde dehydrogenase, dimerisation domain | 3.1E-34 | 165 | 343 |
| PF01118 | Semialdhyde_dh | Semialdehyde dehydrogenase, NAD binding domain | 2.0E-29 | 8 | 132 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046983 | protein dimerization activity | Yes |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Yes |
| GO:0051287 | NAD binding | Yes |
| GO:0008652 | cellular amino acid biosynthetic process | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0005515 | protein binding | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0006520 | cellular amino acid metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0019752 | carboxylic acid metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0046394 | carboxylic acid biosynthetic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0000166 | nucleotide binding | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0044283 | small molecule biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016053 | organic acid biosynthetic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0016491 | oxidoreductase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8015.t1 MASYPKKKCGVLGATGSVGQRFILLLADHPFLELHAVGASERSAGKQYKDAVRWKQSTAMSEKLSTLVLRDCKAE QFADCDLVFSGLNSDIAGDVEMEFIKADIPVFSNAKNYRKHPLVPLVVPTVNPQHLDLIPHQRKHFGLKKGFLVC NSNCAVIGIVIPFAALQAKFGPVEEVEVFTEQALSGAGYPGVPSMDILDNVIPFISGEEDKLENEAQKILGSLNA DATAFEEQSGLRVGATCTRVGVTDGHMAFVSLRFKNRPAPSAEQVAQAMREYQSEAQKLGAPSAPAQAIRVFDEP DRPQPRLDRDISKGYTVSVGRVRDGNEGGYFDLRFAALSHNTVIGAAGSSILNAEVAVIKGYI* |
| Coding | >Ani_SJS100_1|g8015.t1 ATGGCCTCGTATCCTAAGAAGAAGTGCGGTGTTTTGGGCGCCACCGGCTCCGTGGGCCAGCGTTTCATCCTCCTG CTTGCCGACCACCCCTTCCTGGAGCTGCACGCCGTCGGTGCGTCTGAGCGTTCTGCGGGCAAGCAGTACAAGGAT GCCGTGAGATGGAAGCAGTCTACGGCTATGTCTGAGAAGCTTAGCACACTCGTCCTCCGCGACTGCAAGGCCGAA CAGTTCGCTGACTGCGATCTCGTCTTCTCTGGGCTTAACAGCGACATTGCGGGTGATGTTGAGATGGAATTCATC AAGGCCGATATCCCCGTCTTCTCGAATGCGAAGAACTACCGCAAGCATCCTCTCGTCCCTCTCGTCGTTCCCACC GTCAACCCCCAGCACCTGGATCTCATCCCTCACCAGCGCAAACACTTCGGCCTGAAGAAGGGATTCTTGGTTTGC AACTCCAACTGCGCAGTCATTGGCATTGTTATCCCATTCGCTGCCCTGCAGGCCAAGTTTGGACCCGTTGAGGAG GTGGAGGTCTTCACCGAGCAGGCTCTCTCTGGAGCTGGATACCCTGGCGTGCCCAGCATGGATATCCTGGACAAC GTCATTCCTTTTATCAGCGGTGAGGAAGACAAGCTTGAGAACGAGGCCCAGAAGATCCTGGGCTCCTTGAACGCC GATGCTACTGCTTTCGAAGAGCAGTCCGGCCTACGGGTTGGCGCCACCTGCACTCGCGTTGGAGTTACTGACGGT CACATGGCATTTGTTTCCTTGCGCTTCAAGAACCGCCCTGCTCCCAGCGCAGAGCAGGTGGCTCAGGCCATGAGG GAGTACCAGTCGGAGGCTCAGAAGCTGGGCGCTCCTTCTGCACCCGCCCAGGCTATCCGAGTGTTCGACGAGCCC GACAGACCCCAGCCTAGACTGGACCGGGACATCTCCAAGGGCTACACCGTTAGCGTCGGACGGGTGCGCGACGGC AACGAGGGTGGCTACTTCGATCTCCGTTTCGCTGCTCTTTCGCACAACACCGTTATCGGCGCTGCTGGATCATCC ATCCTCAACGCGGAGGTTGCTGTCATCAAGGGCTACATCTAA |
| Transcript | >Ani_SJS100_1|g8015.t1 ATGGCCTCGTATCCTAAGAAGAAGTGCGGTGTTTTGGGCGCCACCGGCTCCGTGGGCCAGCGTTTCATCCTCCTG CTTGCCGACCACCCCTTCCTGGAGCTGCACGCCGTCGGTGCGTCTGAGCGTTCTGCGGGCAAGCAGTACAAGGAT GCCGTGAGATGGAAGCAGTCTACGGCTATGTCTGAGAAGCTTAGCACACTCGTCCTCCGCGACTGCAAGGCCGAA CAGTTCGCTGACTGCGATCTCGTCTTCTCTGGGCTTAACAGCGACATTGCGGGTGATGTTGAGATGGAATTCATC AAGGCCGATATCCCCGTCTTCTCGAATGCGAAGAACTACCGCAAGCATCCTCTCGTCCCTCTCGTCGTTCCCACC GTCAACCCCCAGCACCTGGATCTCATCCCTCACCAGCGCAAACACTTCGGCCTGAAGAAGGGATTCTTGGTTTGC AACTCCAACTGCGCAGTCATTGGCATTGTTATCCCATTCGCTGCCCTGCAGGCCAAGTTTGGACCCGTTGAGGAG GTGGAGGTCTTCACCGAGCAGGCTCTCTCTGGAGCTGGATACCCTGGCGTGCCCAGCATGGATATCCTGGACAAC GTCATTCCTTTTATCAGCGGTGAGGAAGACAAGCTTGAGAACGAGGCCCAGAAGATCCTGGGCTCCTTGAACGCC GATGCTACTGCTTTCGAAGAGCAGTCCGGCCTACGGGTTGGCGCCACCTGCACTCGCGTTGGAGTTACTGACGGT CACATGGCATTTGTTTCCTTGCGCTTCAAGAACCGCCCTGCTCCCAGCGCAGAGCAGGTGGCTCAGGCCATGAGG GAGTACCAGTCGGAGGCTCAGAAGCTGGGCGCTCCTTCTGCACCCGCCCAGGCTATCCGAGTGTTCGACGAGCCC GACAGACCCCAGCCTAGACTGGACCGGGACATCTCCAAGGGCTACACCGTTAGCGTCGGACGGGTGCGCGACGGC AACGAGGGTGGCTACTTCGATCTCCGTTTCGCTGCTCTTTCGCACAACACCGTTATCGGCGCTGCTGGATCATCC ATCCTCAACGCGGAGGTTGCTGTCATCAAGGGCTACATCTAA |
| Gene | >Ani_SJS100_1|g8015.t1 ATGGCCTCGTATCCTAAGAAGAAGTGCGGTATGGATATACAACACTAGCTATTGCCTGTGGCTTCAGTGCTAATG ACATACAGGTGTTTTGGGCGCCACCGGCTCCGTGGGCCAGCGTTTCATCCTCCTGCTTGCCGACCACCCCTTCCT GGAGCTGCACGCCGTCGGTGCGTCTGAGCGTTCTGCGGGCAAGCAGTACAAGGATGCCGTGAGATGGAAGCAGTC TACGGCTATGTCTGAGAAGCTTAGCACACTCGTCCTCCGCGACTGCAAGGCCGAACAGTTCGCTGACTGCGATCT CGTCTTCTCTGGGCTTAACAGCGACATTGCGGGTGATGTTGGTATGTGGTTCTTTTCCCAGGTGACAGTACTACC TGCTGATTACAAATTTTACAGAGATGGAATTCATCAAGGCCGATATCCCCGTCTTCTCGAATGCGAAGAACTACC GCAAGCATCCTCTCGTCCCTCTCGTCGTTCCCACCGTCAACCCCCAGCACCTGGATCTCATCCCTCACCAGCGCA AACACTTCGGCCTGAAGAAGGGATTCTTGGTTTGCAACTCCAACTGCGCAGTCATTGGCATTGTTATCCCATTCG CTGCCCTGCAGGCCAAGTTTGGACCCGTTGAGGAGGTGGAGGTCTTCACCGAGCAGGCTCTCTCTGGAGCTGGAT ACCCTGGCGTGCCCAGCATGGATATCCTGGACAACGTCATTCCTTTTATCAGCGGTGAGGAAGACAAGCTTGAGA ACGAGGCCCAGAAGATCCTGGGCTCCTTGAACGCCGATGCTACTGCTTTCGAAGAGCAGTCCGGCCTACGGGTTG GCGCCACCTGCACTCGCGTTGGAGTTACTGACGGTCACATGGCATTTGTTTCCTTGCGCTTCAAGAACCGCCCTG CTCCCAGCGCAGAGCAGGTGGCTCAGGCCATGAGGGAGTACCAGTCGGAGGCTCAGAAGCTGGGCGCTCCTTCTG CACCCGCCCAGGCTATCCGAGTGTTCGACGAGCCCGACAGACCCCAGCCTAGACTGGACCGGGACATCTCCAAGG GCTACACCGTTAGCGTCGGACGGGTGCGCGACGGCAACGAGGGTGGCTACTTCGATCTCCGTTTCGCTGCTCTTT CGCACAACACCGTTATCGGCGCTGCTGGATCATCCATCCTCAACGCGGAGGTTGCTGTCATCAAGGGCTACATCT AA |