© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8000.t1 |
| Gene name | |
| Location | scaffold_059:200469..202167 |
| Strand | + |
| Gene length (bp) | 1698 |
| Transcript length (bp) | 1566 |
| Coding sequence length (bp) | 1566 |
| Protein length (aa) | 522 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.3E-83 | 35 | 477 |
| PF00324 | AA_permease | Amino acid permease | 1.6E-10 | 45 | 485 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 35 | 54 | 19 |
| 2 | 67 | 89 | 22 |
| 3 | 114 | 136 | 22 |
| 4 | 156 | 178 | 22 |
| 5 | 182 | 204 | 22 |
| 6 | 271 | 293 | 22 |
| 7 | 323 | 345 | 22 |
| 8 | 366 | 388 | 22 |
| 9 | 403 | 420 | 17 |
| 10 | 433 | 455 | 22 |
| 11 | 465 | 487 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8000.t1 MAYSERQPLLSAPGDSSSDDVPRDTLPTTGQRKHLTWISAYILVVSRVIGSGIFATPGTIVKSAGSVGLSLLIWA VGTVLAACALAVSMEYGCMLPRSGGEKVYLEYTYPRPRFLASTLIAVQAVVLGFTASNCIVFSKYTFFAFNVVPT ELQHKALAVGLMTAVTIIHGCFLRTGIWIQNAFGWVKIFLIGAISLTGIWVILLRPQGGTDALAPEPTSVFSWDT LWEDSNWSWNLLSTSLFKVFYSYAGLNNVNNVLGEVNNPIRTIKTVCPAALLTAGALYFLANISYFLVVPLEDIK SSGELVAGLLFERLFGSHIGRTLFPLAIAISAAGNVMVVTYALARVNQEIARQGFLPWSRVLSSSKPFGAPLGGL IVHYIPSLLVIALPPQGDVYNFILDVEGYPGQVFSLAVTVGLLLLRYCEPSLPRPFKAWLPAVWLRVVVCVALLS APFFPPADGKSDVNFFYATYAIVGMGVIIFGILYWYIWTVLLPRWGGYKLEEEDEVLDDGTKITKLARSYT* |
| Coding | >Ani_SJS100_1|g8000.t1 ATGGCGTACAGTGAACGACAACCTCTATTGAGCGCACCCGGGGACTCCTCTTCGGATGACGTGCCTAGGGATACC CTGCCAACCACGGGACAGCGAAAACACCTTACCTGGATAAGCGCATATATCCTGGTAGTCTCGCGAGTCATTGGG AGCGGCATCTTCGCGACACCCGGAACCATCGTCAAATCTGCCGGCAGTGTCGGCTTATCGCTGTTGATATGGGCT GTTGGCACCGTCCTGGCAGCCTGCGCGCTGGCCGTGTCGATGGAATATGGTTGTATGCTGCCACGATCAGGTGGA GAGAAGGTATACCTGGAGTATACCTATCCGCGTCCTCGGTTCCTTGCGTCGACCCTGATCGCAGTGCAAGCAGTT GTTCTGGGTTTCACGGCCAGCAACTGCATCGTCTTCTCCAAGTATACGTTCTTCGCTTTCAATGTGGTGCCCACT GAGCTCCAACACAAAGCACTGGCAGTGGGATTGATGACGGCGGTAACAATCATTCACGGTTGCTTCCTTCGAACT GGCATCTGGATTCAGAACGCATTCGGCTGGGTAAAAATATTCCTCATCGGTGCCATTTCCCTGACGGGTATCTGG GTCATTTTGCTTCGCCCACAGGGTGGCACCGACGCTCTTGCCCCTGAACCAACCAGCGTTTTCTCGTGGGATACA TTGTGGGAGGATTCGAACTGGAGCTGGAACCTGTTGTCGACGTCCTTATTCAAGGTGTTCTACTCGTACGCGGGA TTGAACAACGTGAACAATGTCCTGGGAGAGGTAAACAATCCGATTCGGACAATCAAAACGGTATGCCCGGCAGCG CTCCTCACAGCTGGTGCTCTGTATTTCCTGGCAAATATTTCGTATTTCCTCGTGGTTCCGCTGGAGGATATCAAG AGCAGCGGAGAACTAGTTGCTGGTCTGCTCTTCGAGCGGCTGTTTGGCAGCCACATTGGACGCACGCTGTTTCCG CTGGCCATCGCCATCTCCGCTGCTGGCAATGTTATGGTGGTGACTTACGCCCTGGCCCGCGTAAACCAAGAGATC GCTCGGCAGGGGTTCCTTCCCTGGTCCCGCGTTCTGTCGTCCTCCAAGCCGTTTGGTGCTCCCCTTGGGGGGCTG ATCGTGCATTATATACCCTCCCTGCTAGTTATCGCGCTTCCACCTCAAGGCGACGTGTATAATTTTATCCTCGAC GTTGAGGGCTACCCAGGACAGGTATTCAGTCTTGCAGTTACAGTGGGTCTTCTGCTGCTGCGATACTGCGAACCG TCTCTTCCACGGCCCTTTAAAGCATGGCTACCTGCAGTATGGCTGCGAGTCGTAGTCTGTGTCGCTTTACTCTCT GCACCATTTTTCCCTCCAGCAGATGGCAAAAGCGATGTAAACTTCTTCTACGCGACATATGCGATCGTGGGGATG GGAGTGATCATCTTTGGAATACTCTACTGGTATATATGGACAGTGCTACTACCACGCTGGGGAGGATATAAGCTG GAGGAGGAAGATGAGGTGTTGGATGACGGGACGAAGATTACCAAGCTTGCGCGTTCGTATACTTGA |
| Transcript | >Ani_SJS100_1|g8000.t1 ATGGCGTACAGTGAACGACAACCTCTATTGAGCGCACCCGGGGACTCCTCTTCGGATGACGTGCCTAGGGATACC CTGCCAACCACGGGACAGCGAAAACACCTTACCTGGATAAGCGCATATATCCTGGTAGTCTCGCGAGTCATTGGG AGCGGCATCTTCGCGACACCCGGAACCATCGTCAAATCTGCCGGCAGTGTCGGCTTATCGCTGTTGATATGGGCT GTTGGCACCGTCCTGGCAGCCTGCGCGCTGGCCGTGTCGATGGAATATGGTTGTATGCTGCCACGATCAGGTGGA GAGAAGGTATACCTGGAGTATACCTATCCGCGTCCTCGGTTCCTTGCGTCGACCCTGATCGCAGTGCAAGCAGTT GTTCTGGGTTTCACGGCCAGCAACTGCATCGTCTTCTCCAAGTATACGTTCTTCGCTTTCAATGTGGTGCCCACT GAGCTCCAACACAAAGCACTGGCAGTGGGATTGATGACGGCGGTAACAATCATTCACGGTTGCTTCCTTCGAACT GGCATCTGGATTCAGAACGCATTCGGCTGGGTAAAAATATTCCTCATCGGTGCCATTTCCCTGACGGGTATCTGG GTCATTTTGCTTCGCCCACAGGGTGGCACCGACGCTCTTGCCCCTGAACCAACCAGCGTTTTCTCGTGGGATACA TTGTGGGAGGATTCGAACTGGAGCTGGAACCTGTTGTCGACGTCCTTATTCAAGGTGTTCTACTCGTACGCGGGA TTGAACAACGTGAACAATGTCCTGGGAGAGGTAAACAATCCGATTCGGACAATCAAAACGGTATGCCCGGCAGCG CTCCTCACAGCTGGTGCTCTGTATTTCCTGGCAAATATTTCGTATTTCCTCGTGGTTCCGCTGGAGGATATCAAG AGCAGCGGAGAACTAGTTGCTGGTCTGCTCTTCGAGCGGCTGTTTGGCAGCCACATTGGACGCACGCTGTTTCCG CTGGCCATCGCCATCTCCGCTGCTGGCAATGTTATGGTGGTGACTTACGCCCTGGCCCGCGTAAACCAAGAGATC GCTCGGCAGGGGTTCCTTCCCTGGTCCCGCGTTCTGTCGTCCTCCAAGCCGTTTGGTGCTCCCCTTGGGGGGCTG ATCGTGCATTATATACCCTCCCTGCTAGTTATCGCGCTTCCACCTCAAGGCGACGTGTATAATTTTATCCTCGAC GTTGAGGGCTACCCAGGACAGGTATTCAGTCTTGCAGTTACAGTGGGTCTTCTGCTGCTGCGATACTGCGAACCG TCTCTTCCACGGCCCTTTAAAGCATGGCTACCTGCAGTATGGCTGCGAGTCGTAGTCTGTGTCGCTTTACTCTCT GCACCATTTTTCCCTCCAGCAGATGGCAAAAGCGATGTAAACTTCTTCTACGCGACATATGCGATCGTGGGGATG GGAGTGATCATCTTTGGAATACTCTACTGGTATATATGGACAGTGCTACTACCACGCTGGGGAGGATATAAGCTG GAGGAGGAAGATGAGGTGTTGGATGACGGGACGAAGATTACCAAGCTTGCGCGTTCGTATACTTGA |
| Gene | >Ani_SJS100_1|g8000.t1 ATGGCGTACAGTGAACGACAACCTCTATTGAGCGCACCCGGGGACTCCTCTTCGGATGACGTGCCTAGGGATACC CTGCCAACCACGGGACAGCGAAAACACCTTACCTGGATAAGCGCATATATCCTGGTAGTCTCGCGAGTCATTGGG AGCGGCATCTTCGCGACACCCGGAACCATCGTCAAATCTGCCGGCAGTGTCGGCTTATCGCTGTTGATATGGGCT GTTGGCACCGTCCTGGCAGCCTGCGCGCTGGCCGTGTCGATGGAATATGGTTGTATGCTGCCACGATCAGGTGGA GAGAAGGTAGTTCCACTGCCCCAGACATAGGCCAAACTAAGTCTATCTAGGTATACCTGGAGTATACCTATCCGC GTCCTCGGTTCCTTGCGTCGACCCTGATCGCAGTGCAAGCAGTTGTTCTGGGTTTCACGGCCAGCAACTGCATCG TCTTCTCCAAGTATACGTTCTTCGCTTTCAATGTGGTGCCCACTGAGCTCCAACACAAAGCACTGGCAGTGGGAT TGATGACGGCGGTAACAATCATTCACGGTTGCTTCCTTCGAACTGGCATCTGGATTCAGAACGCATTCGGCTGGG TAAAAATATTCCTCATCGGTGCCATTTCCCTGACGGGTATCTGGGTCATTTTGCTTCGCCCACAGGGTGGCACCG ACGCTCTTGCCCCTGAACCAACCAGCGTTTTCTCGTGGGATACATTGTGGGAGGATTCGAACTGGAGCTGGAACC TGTTGTCGACGTCCTTATTCAAGGTGTTCTACTCGTACGCGGGATTGAACAACGTGAACAATGTCCTGGGAGAGG TAAACAATCCGATTCGGACAATCAAAACGGTATGCCCGGCAGCGCTCCTCACAGCTGGTGCTCTGTATTTCCTGG CAAATATTTCGTATTTCCTCGTGGTTCCGCTGGAGGATATCAAGAGCAGCGGAGAACTAGTTGCTGGTCTGCTCT TCGAGCGGCTGTTTGGCAGCCACATTGGACGCACGCTGTTTCCGCTGGCCATCGCCATCTCCGCTGCTGGCAATG TTATGGTGGTGACTTACGCCCTGGTACGTTACTCCGATTTTTCAGTGAATATGTCTAATTGAATAGGCCCGCGTA AACCAAGAGATCGCTCGGCAGGGGTTCCTTCCCTGGTCCCGCGTTCTGTCGTCCTCCAAGCCGTTTGGTGCTCCC CTTGGGGGGCTGATCGTGCATTATATACCCTCCCTGCTAGTTATCGCGCTTCCACCTCAAGGCGACGTGTATAAT TTTATCCTCGACGTTGAGGGCTACCCAGGACAGGTATTCAGTCTTGCAGTTACAGTGGGTCTTCTGCTGCTGCGA TACTGCGAACCGTCTCTTCCACGGCCCTTTAAAGCATGGCTACCTGCAGTATGGCTGCGAGTCGTAGTCTGTGTC GCTTTACTCTCTGCACCATTTTTCCCTCCAGCAGATGGCAAAAGCGATGTAAACTTCTTCTACGCGACATATGCG ATCGTGGGGATGGGAGTGTACGTATACCCCAACCATCGATGGGCATCGCTAACTAAAAGTAGGATCATCTTTGGA ATACTCTACTGGTATATATGGACAGTGCTACTACCACGCTGGGGAGGATATAAGCTGGAGGAGGAAGATGAGGTG TTGGATGACGGGACGAAGATTACCAAGCTTGCGCGTTCGTATACTTGA |