Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7988.t1
Gene name
Locationscaffold_059:171596..172188
Strand-
Gene length (bp)592
Transcript length (bp)528
Coding sequence length (bp)528
Protein length (aa) 176

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 6.4E-27 26 144

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7988.t1
MICNTLLVVALSLGLVQASPIAKRDAATVLSDLETIGNDVTTLKTDVTNWTGDLLAALGILSDYNTVKSALDTAI
TDTEAASAFTDTESSSITTEVTSLATIIIATLDELISKESTAASAGVTSTLLSSLETLKTDTDELGADLEAKATT
TDAATIASTLASIDAAFSSAIAAYE*
Coding >Ani_SJS100_1|g7988.t1
ATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCAAGCAAGCCCTATCGCCAAGCGCGAT
GCTGCGACAGTGCTTTCCGACCTTGAGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCAACTGG
ACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGTCAAAAGTGCTTTGGACACGGCCATA
ACTGATACGGAGGCCGCTTCCGCATTCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCC
ACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAGGAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACT
TTGCTCTCCTCCCTGGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGGCGAAGGCCACCACG
ACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCCATCGACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAG
TAA
Transcript >Ani_SJS100_1|g7988.t1
ATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCAAGCAAGCCCTATCGCCAAGCGCGAT
GCTGCGACAGTGCTTTCCGACCTTGAGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCAACTGG
ACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGTCAAAAGTGCTTTGGACACGGCCATA
ACTGATACGGAGGCCGCTTCCGCATTCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCC
ACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAGGAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACT
TTGCTCTCCTCCCTGGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGGCGAAGGCCACCACG
ACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCCATCGACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAG
TAA
Gene >Ani_SJS100_1|g7988.t1
ATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCAAGCAAGCCCTATCGCCAAGCGCGAT
GCTGCGACAGTGCTTTCCGACCTTGAGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCAACTGG
ACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGTCAAAAGTGCTTTGGACACGGCCATA
ACTGATACGGAGGCCGCTTCCGCATTCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCC
ACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAGGTAAATTCAAGAAAGCCGACGAGCTTCATTGTTCTG
TTGTTGCAGGACTGATGCACAGTTCTAGGAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTC
CCTGGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGGCGAAGGCCACCACGACGGATGCGGC
AACCATTGCCTCGACTCTTGCCTCCATCGACGCGGCATTTTCGAGTGCAATTGCTGCCTATGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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