Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7965.t1
Gene name
Locationscaffold_059:99919..100758
Strand+
Gene length (bp)839
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 7.7E-36 7 210
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.8E-07 3 116

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7965.t1
MRVLVIGGSGRCGKLVIDDLLSRGHQVTTLARKPESLGGARAGLKVVQGTPTELEDVRAAFQADIPDVVIVTLNA
PRASDSPFAAPISPPRLMTDCNSNVLAAMKEFGVRKTVILQAFGVGESWDNMHCVLRLLMKKSNMSYQYDDHNAT
AKAVQASGLDYVMVRPSRLVETPDANQPVKVWPDHGKGVPMMASTSRITVARWLVDAAESNKWDNTAPVITN*
Coding >Ani_SJS100_1|g7965.t1
ATGCGCGTTCTCGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGCCAC
CAGGTTACGACGTTGGCCCGCAAGCCCGAATCTCTCGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGAACC
CCCACCGAACTCGAGGACGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGGTAATTGTGACACTTAACGCC
CCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCCCCTCGGCTCATGACTGACTGCAACTCCAACGTG
CTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAAGCGTTTGGGGTTGGGGAATCGTGGGAC
AACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGTATGACGATCACAACGCGACG
GCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGCTGGTGGAGACGCCCGATGCC
AATCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCAGCACCAGTCGCATTACGGTG
GCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCGTGATCACCAACTAG
Transcript >Ani_SJS100_1|g7965.t1
ATGCGCGTTCTCGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGCCAC
CAGGTTACGACGTTGGCCCGCAAGCCCGAATCTCTCGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGAACC
CCCACCGAACTCGAGGACGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGGTAATTGTGACACTTAACGCC
CCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCCCCTCGGCTCATGACTGACTGCAACTCCAACGTG
CTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAAGCGTTTGGGGTTGGGGAATCGTGGGAC
AACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGTATGACGATCACAACGCGACG
GCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGCTGGTGGAGACGCCCGATGCC
AATCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCAGCACCAGTCGCATTACGGTG
GCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCGTGATCACCAACTAG
Gene >Ani_SJS100_1|g7965.t1
ATGCGCGTTCTCGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGTAAG
TGTCTCTCGCATCAACCTGCATGTCATTGGTTGTATCGGCTAAATTGCTAACAATGAGATCCAGGCCACCAGGTT
ACGACGTTGGCCCGCAAGCCCGAATCTCTCGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGTGAGTCTTAG
TCGTAGTCTTAGTGCCTCTTAGTCCTCGCAGTCCCTCTGGATATGCGCGAAGGAATATCGACTCCAGATTGACTA
ACAGAAATCCATCAGGAACCCCCACCGAACTCGAGGACGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGG
TAATTGTGACACTTAACGCCCCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCCCCTCGGCTCATGA
CTGACTGCAACTCCAACGTGCTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAAGCGTTTG
GGGTTGGGGAATCGTGGGACAACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGT
ATGACGATCACAACGCGACGGCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGC
TGGTGGAGACGCCCGATGCCAATCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCA
GCACCAGTCGCATTACGGTGGCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCG
TGATCACCAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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