Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7875.t1
Gene name
Locationscaffold_058:46646..47093
Strand-
Gene length (bp)447
Transcript length (bp)447
Coding sequence length (bp)447
Protein length (aa) 149

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07883 Cupin_2 Cupin domain 9.2E-18 57 123
PF02311 AraC_binding AraC-like ligand binding domain 9.0E-11 56 122

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0080090 regulation of primary metabolic process No
GO:0019222 regulation of metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0051252 regulation of RNA metabolic process No
GO:0065007 biological regulation No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0050794 regulation of cellular process No
GO:0009889 regulation of biosynthetic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0008150 biological_process No
GO:0010468 regulation of gene expression No
GO:0050789 regulation of biological process No
GO:0010556 regulation of macromolecule biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup10838
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 124.48 Ani_SJS7_1|g10557.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g3541.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g10650.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g10606.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g8946.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g8389.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g8862.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g10104.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g8411.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g5553.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g5021.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g10591.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g7875.t1 (this protein)
Aspergillus niger CBS 147371 Ani_SJS27_1|g10217.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g10556.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g5619.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g8079.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7875.t1
MPETKTEIHPIIYHRQTITSLPRESFGDPPHGHLTWRTLLSSPQTPTSDMCAGLAVCPPQGGHLCRHRHTQAEIY
YITSGSGHVSIDGKEYEVSAGAVLFIPGDAEHGVVNRGEEPLEWFYVFPTGSFGDVFYRFEEGPKAKEVEGRR*
Coding >Ani_SJS100_1|g7875.t1
ATGCCCGAAACGAAAACAGAAATCCACCCTATCATCTACCATCGTCAAACCATCACCTCCCTGCCCCGCGAATCC
TTCGGCGACCCTCCTCACGGCCACCTAACATGGCGCACTCTCCTCTCCTCCCCTCAAACCCCCACTTCCGACATG
TGCGCCGGTCTAGCAGTCTGTCCTCCGCAAGGAGGCCATCTTTGTCGCCACCGCCACACCCAAGCTGAGATATAC
TACATCACTTCGGGATCTGGACATGTGTCCATCGATGGCAAGGAGTATGAGGTTTCTGCGGGAGCGGTGTTGTTT
ATTCCAGGTGATGCGGAACATGGGGTGGTTAATCGGGGAGAGGAGCCGTTGGAGTGGTTTTATGTGTTTCCGACC
GGATCGTTTGGGGATGTGTTTTATCGGTTTGAGGAGGGGCCGAAAGCCAAGGAGGTGGAGGGAAGGCGATAA
Transcript >Ani_SJS100_1|g7875.t1
ATGCCCGAAACGAAAACAGAAATCCACCCTATCATCTACCATCGTCAAACCATCACCTCCCTGCCCCGCGAATCC
TTCGGCGACCCTCCTCACGGCCACCTAACATGGCGCACTCTCCTCTCCTCCCCTCAAACCCCCACTTCCGACATG
TGCGCCGGTCTAGCAGTCTGTCCTCCGCAAGGAGGCCATCTTTGTCGCCACCGCCACACCCAAGCTGAGATATAC
TACATCACTTCGGGATCTGGACATGTGTCCATCGATGGCAAGGAGTATGAGGTTTCTGCGGGAGCGGTGTTGTTT
ATTCCAGGTGATGCGGAACATGGGGTGGTTAATCGGGGAGAGGAGCCGTTGGAGTGGTTTTATGTGTTTCCGACC
GGATCGTTTGGGGATGTGTTTTATCGGTTTGAGGAGGGGCCGAAAGCCAAGGAGGTGGAGGGAAGGCGATAA
Gene >Ani_SJS100_1|g7875.t1
ATGCCCGAAACGAAAACAGAAATCCACCCTATCATCTACCATCGTCAAACCATCACCTCCCTGCCCCGCGAATCC
TTCGGCGACCCTCCTCACGGCCACCTAACATGGCGCACTCTCCTCTCCTCCCCTCAAACCCCCACTTCCGACATG
TGCGCCGGTCTAGCAGTCTGTCCTCCGCAAGGAGGCCATCTTTGTCGCCACCGCCACACCCAAGCTGAGATATAC
TACATCACTTCGGGATCTGGACATGTGTCCATCGATGGCAAGGAGTATGAGGTTTCTGCGGGAGCGGTGTTGTTT
ATTCCAGGTGATGCGGAACATGGGGTGGTTAATCGGGGAGAGGAGCCGTTGGAGTGGTTTTATGTGTTTCCGACC
GGATCGTTTGGGGATGTGTTTTATCGGTTTGAGGAGGGGCCGAAAGCCAAGGAGGTGGAGGGAAGGCGATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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