Protein ID | Ani_SJS100_1|g7870.t1 |
Gene name | |
Location | scaffold_058:27400..28888 |
Strand | - |
Gene length (bp) | 1488 |
Transcript length (bp) | 1488 |
Coding sequence length (bp) | 1488 |
Protein length (aa) | 496 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13086 | AAA_11 | AAA domain | 2.6E-26 | 261 | 487 |
PF13604 | AAA_30 | AAA domain | 2.4E-07 | 261 | 487 |
PF13245 | AAA_19 | AAA domain | 3.8E-07 | 275 | 488 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004386 | helicase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0140640 | catalytic activity, acting on a nucleic acid | No |
GO:0140657 | ATP-dependent activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7870.t1 MEWYKKCLIALAKPFGLLPVILDFFALLKGKAGEGLGWLHGLNSPVFFDDNDRVCRLLKASKNERYQQQREVLDV LNPTRCHEGWCTESNFGLPASTHLVHIKFSPVRSSNDLVIPRLPEGTKVHFEWATEGIPYSMETKLAKQGAVTQS DSNADLVLRVTGQVTQAVGVRFPIVTFAVANTMPIDAQIEALGEASNVFVFGDRPGNEGQGLSLRRTLLAHGTEL EYGNQGYFTLDVRQMSPISPENQQERLEHIWHTFRLDETQRRAFMASVTQIVCGVSLIQGPPGTGKSSTAKAIVC AAAALGCKILLVAGSNKGIDNLAETVIKALRRDERLQHWCGQLVRFRTPRYQLERARGGESSDEGDNLSNYQAHV LTIKYAHEHATTDKYARSLMERLAADKQRLLSREERKCLKGDYERCVLEVLENAKIVATTLSNASQDLLRSSSFK PDFVVCDEAAQCQEGEIAIALTMPSTRVMVLIGDPQQPATRARYT* |
Coding | >Ani_SJS100_1|g7870.t1 ATGGAATGGTACAAGAAATGCTTAATAGCCTTAGCCAAGCCGTTTGGATTACTCCCTGTTATTCTGGACTTCTTC GCACTACTAAAGGGGAAAGCCGGGGAAGGCCTTGGTTGGTTACACGGGCTAAATAGCCCGGTGTTCTTTGACGAC AACGACCGCGTATGTCGTCTTCTCAAGGCCTCAAAGAATGAACGCTACCAGCAACAGCGGGAAGTTCTTGACGTC CTCAATCCCACCCGGTGTCATGAGGGGTGGTGCACTGAGAGTAATTTCGGGCTACCGGCTAGCACACACCTGGTG CACATAAAGTTCTCGCCAGTGCGGTCGAGTAACGACTTGGTAATTCCCAGATTGCCCGAGGGCACCAAGGTGCAC TTCGAGTGGGCTACTGAGGGTATCCCCTACAGCATGGAGACAAAGCTCGCTAAACAGGGAGCCGTCACTCAGAGT GACTCCAATGCCGACCTTGTTCTCCGCGTGACAGGCCAGGTCACACAAGCTGTGGGCGTACGTTTTCCCATTGTC ACTTTCGCAGTGGCAAATACAATGCCCATTGACGCCCAGATTGAGGCCCTTGGTGAGGCCAGTAATGTGTTTGTT TTCGGCGATCGTCCAGGAAATGAGGGCCAAGGGCTCTCGCTGAGGCGCACCCTCCTTGCGCATGGAACTGAGCTC GAGTATGGAAACCAAGGCTACTTTACACTTGACGTCCGGCAAATGTCGCCCATATCGCCGGAGAATCAGCAAGAG AGGCTGGAACACATTTGGCACACCTTCCGACTTGACGAGACTCAAAGAAGGGCTTTTATGGCTTCAGTGACACAG ATTGTCTGTGGTGTCAGCCTGATTCAAGGTCCGCCAGGAACTGGAAAATCCAGTACGGCCAAGGCAATTGTCTGC GCAGCGGCAGCTCTTGGTTGCAAGATTCTCCTAGTTGCTGGGTCCAACAAGGGTATTGACAACCTTGCCGAGACA GTGATAAAAGCGCTCCGACGGGACGAGCGACTACAACACTGGTGTGGCCAGCTTGTTCGGTTTCGAACGCCACGG TACCAACTCGAAAGGGCAAGGGGTGGTGAATCCTCAGATGAGGGTGACAATCTGAGTAACTATCAAGCTCACGTC CTCACCATTAAGTATGCCCATGAGCATGCCACCACCGACAAGTACGCCCGTTCTCTAATGGAACGCCTTGCAGCA GACAAGCAGCGACTACTGAGCAGGGAAGAGCGGAAGTGCCTCAAGGGGGACTACGAACGTTGTGTCTTGGAAGTC CTGGAGAACGCCAAGATCGTTGCCACAACCTTGAGCAACGCATCCCAGGATCTTCTGCGAAGCTCCTCTTTCAAG CCTGACTTTGTGGTTTGCGATGAGGCAGCGCAATGCCAGGAAGGTGAAATTGCCATAGCCCTGACCATGCCATCA ACTAGGGTAATGGTCTTGATTGGAGACCCGCAGCAACCTGCGACAAGGGCGCGTTATACCTAA |
Transcript | >Ani_SJS100_1|g7870.t1 ATGGAATGGTACAAGAAATGCTTAATAGCCTTAGCCAAGCCGTTTGGATTACTCCCTGTTATTCTGGACTTCTTC GCACTACTAAAGGGGAAAGCCGGGGAAGGCCTTGGTTGGTTACACGGGCTAAATAGCCCGGTGTTCTTTGACGAC AACGACCGCGTATGTCGTCTTCTCAAGGCCTCAAAGAATGAACGCTACCAGCAACAGCGGGAAGTTCTTGACGTC CTCAATCCCACCCGGTGTCATGAGGGGTGGTGCACTGAGAGTAATTTCGGGCTACCGGCTAGCACACACCTGGTG CACATAAAGTTCTCGCCAGTGCGGTCGAGTAACGACTTGGTAATTCCCAGATTGCCCGAGGGCACCAAGGTGCAC TTCGAGTGGGCTACTGAGGGTATCCCCTACAGCATGGAGACAAAGCTCGCTAAACAGGGAGCCGTCACTCAGAGT GACTCCAATGCCGACCTTGTTCTCCGCGTGACAGGCCAGGTCACACAAGCTGTGGGCGTACGTTTTCCCATTGTC ACTTTCGCAGTGGCAAATACAATGCCCATTGACGCCCAGATTGAGGCCCTTGGTGAGGCCAGTAATGTGTTTGTT TTCGGCGATCGTCCAGGAAATGAGGGCCAAGGGCTCTCGCTGAGGCGCACCCTCCTTGCGCATGGAACTGAGCTC GAGTATGGAAACCAAGGCTACTTTACACTTGACGTCCGGCAAATGTCGCCCATATCGCCGGAGAATCAGCAAGAG AGGCTGGAACACATTTGGCACACCTTCCGACTTGACGAGACTCAAAGAAGGGCTTTTATGGCTTCAGTGACACAG ATTGTCTGTGGTGTCAGCCTGATTCAAGGTCCGCCAGGAACTGGAAAATCCAGTACGGCCAAGGCAATTGTCTGC GCAGCGGCAGCTCTTGGTTGCAAGATTCTCCTAGTTGCTGGGTCCAACAAGGGTATTGACAACCTTGCCGAGACA GTGATAAAAGCGCTCCGACGGGACGAGCGACTACAACACTGGTGTGGCCAGCTTGTTCGGTTTCGAACGCCACGG TACCAACTCGAAAGGGCAAGGGGTGGTGAATCCTCAGATGAGGGTGACAATCTGAGTAACTATCAAGCTCACGTC CTCACCATTAAGTATGCCCATGAGCATGCCACCACCGACAAGTACGCCCGTTCTCTAATGGAACGCCTTGCAGCA GACAAGCAGCGACTACTGAGCAGGGAAGAGCGGAAGTGCCTCAAGGGGGACTACGAACGTTGTGTCTTGGAAGTC CTGGAGAACGCCAAGATCGTTGCCACAACCTTGAGCAACGCATCCCAGGATCTTCTGCGAAGCTCCTCTTTCAAG CCTGACTTTGTGGTTTGCGATGAGGCAGCGCAATGCCAGGAAGGTGAAATTGCCATAGCCCTGACCATGCCATCA ACTAGGGTAATGGTCTTGATTGGAGACCCGCAGCAACCTGCGACAAGGGCGCGTTATACCTAA |
Gene | >Ani_SJS100_1|g7870.t1 ATGGAATGGTACAAGAAATGCTTAATAGCCTTAGCCAAGCCGTTTGGATTACTCCCTGTTATTCTGGACTTCTTC GCACTACTAAAGGGGAAAGCCGGGGAAGGCCTTGGTTGGTTACACGGGCTAAATAGCCCGGTGTTCTTTGACGAC AACGACCGCGTATGTCGTCTTCTCAAGGCCTCAAAGAATGAACGCTACCAGCAACAGCGGGAAGTTCTTGACGTC CTCAATCCCACCCGGTGTCATGAGGGGTGGTGCACTGAGAGTAATTTCGGGCTACCGGCTAGCACACACCTGGTG CACATAAAGTTCTCGCCAGTGCGGTCGAGTAACGACTTGGTAATTCCCAGATTGCCCGAGGGCACCAAGGTGCAC TTCGAGTGGGCTACTGAGGGTATCCCCTACAGCATGGAGACAAAGCTCGCTAAACAGGGAGCCGTCACTCAGAGT GACTCCAATGCCGACCTTGTTCTCCGCGTGACAGGCCAGGTCACACAAGCTGTGGGCGTACGTTTTCCCATTGTC ACTTTCGCAGTGGCAAATACAATGCCCATTGACGCCCAGATTGAGGCCCTTGGTGAGGCCAGTAATGTGTTTGTT TTCGGCGATCGTCCAGGAAATGAGGGCCAAGGGCTCTCGCTGAGGCGCACCCTCCTTGCGCATGGAACTGAGCTC GAGTATGGAAACCAAGGCTACTTTACACTTGACGTCCGGCAAATGTCGCCCATATCGCCGGAGAATCAGCAAGAG AGGCTGGAACACATTTGGCACACCTTCCGACTTGACGAGACTCAAAGAAGGGCTTTTATGGCTTCAGTGACACAG ATTGTCTGTGGTGTCAGCCTGATTCAAGGTCCGCCAGGAACTGGAAAATCCAGTACGGCCAAGGCAATTGTCTGC GCAGCGGCAGCTCTTGGTTGCAAGATTCTCCTAGTTGCTGGGTCCAACAAGGGTATTGACAACCTTGCCGAGACA GTGATAAAAGCGCTCCGACGGGACGAGCGACTACAACACTGGTGTGGCCAGCTTGTTCGGTTTCGAACGCCACGG TACCAACTCGAAAGGGCAAGGGGTGGTGAATCCTCAGATGAGGGTGACAATCTGAGTAACTATCAAGCTCACGTC CTCACCATTAAGTATGCCCATGAGCATGCCACCACCGACAAGTACGCCCGTTCTCTAATGGAACGCCTTGCAGCA GACAAGCAGCGACTACTGAGCAGGGAAGAGCGGAAGTGCCTCAAGGGGGACTACGAACGTTGTGTCTTGGAAGTC CTGGAGAACGCCAAGATCGTTGCCACAACCTTGAGCAACGCATCCCAGGATCTTCTGCGAAGCTCCTCTTTCAAG CCTGACTTTGTGGTTTGCGATGAGGCAGCGCAATGCCAGGAAGGTGAAATTGCCATAGCCCTGACCATGCCATCA ACTAGGGTAATGGTCTTGATTGGAGACCCGCAGCAACCTGCGACAAGGGCGCGTTATACCTAA |