Protein ID | Ani_SJS100_1|g7854.t1 |
Gene name | |
Location | scaffold_057:185193..187334 |
Strand | - |
Gene length (bp) | 2141 |
Transcript length (bp) | 2079 |
Coding sequence length (bp) | 2079 |
Protein length (aa) | 693 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10453 | NUFIP1 | Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) | 2.3E-17 | 322 | 369 |
PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 3.2E-07 | 577 | 600 |
PF18044 | zf-CCCH_4 | CCCH-type zinc finger | 2.4E-06 | 579 | 600 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 8089 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7854.t1 MNSQGFSFPPPPPPPPSQQQQPQQPQPQQQQYRHHNANYPPQYGGQGYYGQRGGHAQGGHFRGRGRGYGNRGGAR GGHFMTPDNRAYPTATPSTGYAQMNYSGYASHPNPATQATPSPSQNFQRAPNASSFPPSQPFTQTAARVPPYQGQ PNYGGTYTPPTAQPGSMYPSAMPTQQPVNQPVQTPMVAPPMRWGFEHTGPTGSFAGTQRGGRFNGHNAQSHNGDR TTHYANKRDHNAAFGKPQSVAPRVPAPPPVPSFGNPLPVKPPPPADATRKPKKKKRKHNQLGLTPRTEEHESSEE EDDVDEEARLAGAAANTTALKVTYRGKTSTLQSPEEIAAWIEERRKRYPTQAKVEEKKKAMEEAKKARQEVQRQK DQRKQESKRAQKDGRNKKANDKQPNDQPVDPMDAAAKAKEKADRLRRKLMKEEKRVAKAEADAERALMRAEALQK GSADANIDETLATGQTQPASATGTKADAGSEDKSVKPGPAAAEESGVANGHTTSATDVNIDAGKPEEAGDEVNIS SQDDSDSSDWTSSSGSDSSSDESDSDSDSAPEEATSRREGPERVPPPPRENKKKPCHHFARTGRCRNGDKCRFSH ETPERGKKAKPTESKGRKGLLQALLDRQKGEEDRKVMEAIAWLGENGFLDAPKDQEEANRSISVTDGAEAPQQAA PKDTISGQETDAAPVTA* |
Coding | >Ani_SJS100_1|g7854.t1 ATGAACTCCCAGGGGTTCTCTTTTCCTCCTCCCCCTCCTCCTCCTCCCTCCCAGCAACAACAACCGCAACAACCG CAGCCGCAGCAGCAACAATACCGTCACCATAATGCCAACTACCCTCCTCAATATGGCGGTCAGGGCTACTACGGC CAACGAGGTGGTCATGCTCAGGGTGGCCATTTCAGAGGACGTGGGAGGGGCTATGGAAACCGGGGAGGCGCCCGT GGAGGTCACTTCATGACACCAGATAACCGCGCGTACCCTACCGCTACACCGTCGACTGGCTACGCTCAGATGAAC TACTCTGGGTATGCCTCGCACCCAAACCCAGCAACCCAAGCTACTCCTTCGCCATCGCAAAACTTTCAACGGGCC CCGAATGCCTCCTCTTTCCCTCCTTCGCAGCCTTTTACGCAAACCGCAGCCCGGGTGCCGCCTTACCAAGGCCAG CCTAACTATGGGGGAACTTATACTCCGCCTACCGCTCAACCTGGGTCTATGTATCCTTCGGCCATGCCTACCCAG CAGCCGGTCAACCAGCCAGTTCAGACGCCCATGGTTGCCCCACCTATGCGCTGGGGGTTTGAGCATACGGGACCG ACAGGCTCTTTCGCCGGAACTCAGCGCGGCGGACGCTTCAATGGTCATAACGCTCAGTCACACAACGGGGATAGA ACAACGCACTATGCCAACAAACGCGATCATAATGCAGCCTTTGGAAAACCCCAGTCTGTCGCACCGCGAGTTCCC GCACCGCCTCCGGTTCCAAGCTTTGGAAACCCACTCCCTGTCAAACCCCCGCCACCCGCTGATGCCACAAGGAAG CCAAAGAAGAAGAAGAGAAAGCACAATCAGCTTGGACTGACCCCGAGAACCGAAGAGCATGAGTCGAGCGAGGAG GAAGACGATGTCGATGAAGAAGCGAGGTTAGCCGGAGCAGCTGCCAACACCACAGCTCTCAAGGTCACATATCGC GGGAAGACTTCCACACTGCAGTCGCCAGAGGAAATTGCTGCCTGGATCGAGGAACGGCGAAAGCGGTATCCGACG CAGGCGAAAGTGGAAGAGAAGAAAAAGGCCATGGAAGAGGCGAAGAAAGCACGCCAGGAAGTACAGCGGCAGAAG GATCAGCGAAAGCAAGAGTCCAAACGAGCGCAGAAGGACGGTCGAAATAAGAAAGCAAACGACAAGCAGCCTAAT GACCAACCGGTCGACCCCATGGATGCTGCGGCAAAGGCCAAGGAGAAGGCGGACAGACTACGGCGGAAGCTCATG AAAGAAGAGAAGCGAGTGGCCAAAGCCGAGGCTGATGCTGAAAGGGCTCTAATGAGGGCTGAGGCATTGCAAAAA GGTTCGGCCGATGCCAACATAGACGAAACTTTGGCCACTGGACAAACCCAACCGGCTTCTGCAACCGGGACCAAG GCAGATGCAGGTTCGGAAGACAAATCTGTCAAACCCGGGCCTGCTGCGGCCGAGGAATCAGGAGTCGCCAACGGC CATACGACGTCTGCAACAGATGTCAATATAGACGCCGGGAAGCCCGAAGAGGCTGGGGACGAGGTCAACATCTCG TCTCAAGATGACTCCGATAGCAGCGATTGGACGTCGTCGAGTGGGTCAGATTCCTCCTCGGATGAATCCGACAGT GACTCGGACTCTGCGCCGGAGGAGGCGACCTCTCGACGAGAAGGACCCGAGCGGGTACCGCCACCCCCTCGCGAG AACAAGAAAAAACCATGCCATCACTTTGCTCGAACCGGTCGCTGCAGGAACGGAGATAAATGCCGATTTTCGCAC GAGACACCTGAGCGAGGGAAGAAAGCGAAGCCAACGGAGTCTAAGGGGCGAAAGGGGCTTCTACAAGCGCTTCTG GACCGCCAAAAGGGAGAAGAAGACCGAAAAGTCATGGAAGCAATTGCATGGCTCGGAGAAAACGGATTCCTAGAT GCGCCAAAGGACCAAGAGGAAGCTAACAGGTCGATATCGGTGACCGACGGCGCGGAGGCTCCGCAGCAGGCAGCC CCCAAGGATACAATCTCGGGGCAAGAAACCGATGCTGCCCCAGTGACTGCCTAG |
Transcript | >Ani_SJS100_1|g7854.t1 ATGAACTCCCAGGGGTTCTCTTTTCCTCCTCCCCCTCCTCCTCCTCCCTCCCAGCAACAACAACCGCAACAACCG CAGCCGCAGCAGCAACAATACCGTCACCATAATGCCAACTACCCTCCTCAATATGGCGGTCAGGGCTACTACGGC CAACGAGGTGGTCATGCTCAGGGTGGCCATTTCAGAGGACGTGGGAGGGGCTATGGAAACCGGGGAGGCGCCCGT GGAGGTCACTTCATGACACCAGATAACCGCGCGTACCCTACCGCTACACCGTCGACTGGCTACGCTCAGATGAAC TACTCTGGGTATGCCTCGCACCCAAACCCAGCAACCCAAGCTACTCCTTCGCCATCGCAAAACTTTCAACGGGCC CCGAATGCCTCCTCTTTCCCTCCTTCGCAGCCTTTTACGCAAACCGCAGCCCGGGTGCCGCCTTACCAAGGCCAG CCTAACTATGGGGGAACTTATACTCCGCCTACCGCTCAACCTGGGTCTATGTATCCTTCGGCCATGCCTACCCAG CAGCCGGTCAACCAGCCAGTTCAGACGCCCATGGTTGCCCCACCTATGCGCTGGGGGTTTGAGCATACGGGACCG ACAGGCTCTTTCGCCGGAACTCAGCGCGGCGGACGCTTCAATGGTCATAACGCTCAGTCACACAACGGGGATAGA ACAACGCACTATGCCAACAAACGCGATCATAATGCAGCCTTTGGAAAACCCCAGTCTGTCGCACCGCGAGTTCCC GCACCGCCTCCGGTTCCAAGCTTTGGAAACCCACTCCCTGTCAAACCCCCGCCACCCGCTGATGCCACAAGGAAG CCAAAGAAGAAGAAGAGAAAGCACAATCAGCTTGGACTGACCCCGAGAACCGAAGAGCATGAGTCGAGCGAGGAG GAAGACGATGTCGATGAAGAAGCGAGGTTAGCCGGAGCAGCTGCCAACACCACAGCTCTCAAGGTCACATATCGC GGGAAGACTTCCACACTGCAGTCGCCAGAGGAAATTGCTGCCTGGATCGAGGAACGGCGAAAGCGGTATCCGACG CAGGCGAAAGTGGAAGAGAAGAAAAAGGCCATGGAAGAGGCGAAGAAAGCACGCCAGGAAGTACAGCGGCAGAAG GATCAGCGAAAGCAAGAGTCCAAACGAGCGCAGAAGGACGGTCGAAATAAGAAAGCAAACGACAAGCAGCCTAAT GACCAACCGGTCGACCCCATGGATGCTGCGGCAAAGGCCAAGGAGAAGGCGGACAGACTACGGCGGAAGCTCATG AAAGAAGAGAAGCGAGTGGCCAAAGCCGAGGCTGATGCTGAAAGGGCTCTAATGAGGGCTGAGGCATTGCAAAAA GGTTCGGCCGATGCCAACATAGACGAAACTTTGGCCACTGGACAAACCCAACCGGCTTCTGCAACCGGGACCAAG GCAGATGCAGGTTCGGAAGACAAATCTGTCAAACCCGGGCCTGCTGCGGCCGAGGAATCAGGAGTCGCCAACGGC CATACGACGTCTGCAACAGATGTCAATATAGACGCCGGGAAGCCCGAAGAGGCTGGGGACGAGGTCAACATCTCG TCTCAAGATGACTCCGATAGCAGCGATTGGACGTCGTCGAGTGGGTCAGATTCCTCCTCGGATGAATCCGACAGT GACTCGGACTCTGCGCCGGAGGAGGCGACCTCTCGACGAGAAGGACCCGAGCGGGTACCGCCACCCCCTCGCGAG AACAAGAAAAAACCATGCCATCACTTTGCTCGAACCGGTCGCTGCAGGAACGGAGATAAATGCCGATTTTCGCAC GAGACACCTGAGCGAGGGAAGAAAGCGAAGCCAACGGAGTCTAAGGGGCGAAAGGGGCTTCTACAAGCGCTTCTG GACCGCCAAAAGGGAGAAGAAGACCGAAAAGTCATGGAAGCAATTGCATGGCTCGGAGAAAACGGATTCCTAGAT GCGCCAAAGGACCAAGAGGAAGCTAACAGGTCGATATCGGTGACCGACGGCGCGGAGGCTCCGCAGCAGGCAGCC CCCAAGGATACAATCTCGGGGCAAGAAACCGATGCTGCCCCAGTGACTGCCTAG |
Gene | >Ani_SJS100_1|g7854.t1 ATGAACTCCCAGGGGTTCTCTTTTCCTCCTCCCCCTCCTCCTCCTCCCTCCCAGCAACAACAACCGCAACAACCG CAGCCGCAGCAGCAACAATACCGTCACCATAATGCCAACTACCCTCCTCAATATGGCGGTCAGGGCTACTACGGC CAACGAGGTGGTCATGCTCAGGGTGGCCATTTCAGAGGACGTGGGAGGGGCTATGGAAACCGGGGAGGCGCCCGT GGAGGTCACTTCATGACACCAGATAACCGCGCGTACCCTACCGCTACACCGTCGACTGGCTACGCTCAGATGAAC TACTCTGGGTATGCCTCGCACCCAAACCCAGCAACCCAAGCTACTCCTTCGCCATCGCAAAACTTTCAACGGGCC CCGAATGCCTCCTCTTTCCCTCCTTCGCAGCCTTTTACGCAAACCGCAGCCCGGGTGCCGCCTTACCAAGGCCAG CCTAACTATGGGGGAACTTATACTCCGCCTACCGCTCAACCTGGGTCTATGTATCCTTCGGCCATGCCTACCCAG CAGCCGGTCAACCAGCCAGTTCAGACGCCCATGGTTGCCCCACCTATGCGCTGGGGGTTTGAGCATACGGGACCG ACAGGCTCTTTCGCCGGAACTCAGCGCGGCGGACGCTTCAATGGTCATAACGCTCAGTCACACAACGGGGATAGA ACAACGCACTATGCCAACAAACGCGATCATAATGCAGCCTTTGGAAAACCCCAGTCTGTCGCACCGCGAGTTCCC GCACCGCCTCCGGTTCCAAGCTTTGGAAACCCACTCCCTGTCAAACCCCCGCCACCCGCTGATGCCACAAGGAAG CCAAAGAAGAAGAAGAGAAAGCACAATCAGCTTGGACTGACCCCGAGAACCGAAGAGCATGAGTCGAGCGAGGAG GAAGACGATGTCGATGAAGAAGCGAGGTTAGCCGGAGCAGCTGCCAACACCACAGCTCTCAAGGTCACATATCGC GGGAAGACTTCCACACTGCAGTCGCCAGAGGAAATTGCTGCCTGGATCGAGGAACGGCGAAAGCGGTATCCGACG CAGGCGAAAGTGGAAGAGAAGAAAAAGGCCATGGAAGAGGCGAAGAAAGCACGCCAGGAAGTACAGCGGCAGAAG GATCAGCGAAAGCAAGAGTCCAAACGAGCGCAGAAGGACGGTCGAAATAAGAAAGCAAACGACAAGCAGCCTAAT GACCAACCGGTCGACCCCATGGATGCTGCGGCAAAGGCCAAGGAGAAGGCGGACAGACTACGGCGGAAGCTCATG AAAGAAGAGAAGCGAGTGGCCAAAGCCGAGGCTGATGCTGAAAGGGCTCTAATGAGGGCTGAGGCATTGCAAAAA GGTTCGGCCGATGCCAACATAGACGAAACTTTGGCCACTGGACAAACCCAACCGGCTTCTGCAACCGGGACCAAG GCAGATGCAGGTTCGGAAGACAAATCTGTCAAACCCGGGCCTGCTGCGGCCGAGGAATCAGGAGTCGCCAACGGC CATACGACGTCTGCAACAGATGTCAATATAGACGCCGGGAAGCCCGAAGAGGCTGGGGACGAGGTCAACATCTCG TCTCAAGATGACTCCGATAGCAGCGATTGGACGTCGTCGAGTGGGTCAGATTCCTCCTCGGATGAATCCGACAGT GACTCGGACTCTGCGCCGGAGGAGGCGACCTCTCGACGAGAAGGACCCGAGCGGGTACCGCCACCCCCTCGCGAG AACAAGAAAAAACCATGCCATCACTTTGCTCGAACCGGTCGCTGCAGGAACGGAGATAAATGCCGATTTTCGCAC GAGACACCTGAGCGAGGGAAGAAAGCGAAGCCAACGGAGTCTAAGGGGCGAAAGGGGCTTCTACAAGCGGTGAGT CCAGCACTCCCCAAACGCATGCTGCTGAGAACGTGACTAACATGTGCAACCGCCAGCTTCTGGACCGCCAAAAGG GAGAAGAAGACCGAAAAGTCATGGAAGCAATTGCATGGCTCGGAGAAAACGGATTCCTAGATGCGCCAAAGGACC AAGAGGAAGCTAACAGGTCGATATCGGTGACCGACGGCGCGGAGGCTCCGCAGCAGGCAGCCCCCAAGGATACAA TCTCGGGGCAAGAAACCGATGCTGCCCCAGTGACTGCCTAG |