Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7853.t1
Gene name
Locationscaffold_057:181696..182436
Strand-
Gene length (bp)740
Transcript length (bp)678
Coding sequence length (bp)678
Protein length (aa) 226

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 8.9E-22 25 113

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7853.t1
MRSVFYLALSAIASLAAASDNPFNNPEGGYTFTAGSPTTLTWDPTTNGTVTLRLQWGAVFTTTSGELIAGNIDNS
GSYSWTPSAKLAARSDYTIEIIDDDDTDDVNYTPRFSISGATGAVTTSTASSTTSSASSTSSSTEQTSTVSATTL
STTTSSASSSTSTTTASSNSTVSASSSKTASSSSSNTASSSASTASVTTVSTNAGMANQASIGMMALIFGAVALI
*
Coding >Ani_SJS100_1|g7853.t1
ATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGCTGCTTCCGATAACCCGTTCAACAAC
CCCGAGGGTGGCTACACCTTCACCGCGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTC
ACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACTCATTGCCGGGAACATCGACAACTCT
GGTAGCTACTCTTGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCATTGAGATCATCGATGATGAT
GACACGGACGATGTCAACTACACCCCGCGCTTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCC
TCGTCAACCACGTCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCACCGTGAGCGCCACTACTCTG
TCTACTACCACCTCGAGCGCTAGCTCTTCCACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCG
TCCTCCAAGACTGCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTACCGCCAGCGTTACCACCGTC
TCCACCAATGCCGGTATGGCCAACCAGGCCTCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATC
TAA
Transcript >Ani_SJS100_1|g7853.t1
ATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGCTGCTTCCGATAACCCGTTCAACAAC
CCCGAGGGTGGCTACACCTTCACCGCGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTC
ACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACTCATTGCCGGGAACATCGACAACTCT
GGTAGCTACTCTTGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCATTGAGATCATCGATGATGAT
GACACGGACGATGTCAACTACACCCCGCGCTTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCC
TCGTCAACCACGTCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCACCGTGAGCGCCACTACTCTG
TCTACTACCACCTCGAGCGCTAGCTCTTCCACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCG
TCCTCCAAGACTGCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTACCGCCAGCGTTACCACCGTC
TCCACCAATGCCGGTATGGCCAACCAGGCCTCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATC
TAA
Gene >Ani_SJS100_1|g7853.t1
ATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGCTGCTTCCGATAACCCGTTCAACAAC
CCCGAGGGTGGCTACACCTTCACCGCGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTC
ACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACTCATTGCCGGTAAGCTCCTGTCATGG
ATGTGGTGTGAAAAGCTTCGATGAGATGCTAACGAGAAGAATCAGGGAACATCGACAACTCTGGTAGCTACTCTT
GGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCATTGAGATCATCGATGATGATGACACGGACGATG
TCAACTACACCCCGCGCTTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCCTCGTCAACCACGT
CTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCACCGTGAGCGCCACTACTCTGTCTACTACCACCT
CGAGCGCTAGCTCTTCCACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCGTCCTCCAAGACTG
CCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTACCGCCAGCGTTACCACCGTCTCCACCAATGCCG
GTATGGCCAACCAGGCCTCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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