Protein ID | Ani_SJS100_1|g7836.t1 |
Gene name | |
Location | scaffold_057:140869..142260 |
Strand | - |
Gene length (bp) | 1391 |
Transcript length (bp) | 1086 |
Coding sequence length (bp) | 1086 |
Protein length (aa) | 362 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 50 | 69 | 19 |
3 | 101 | 123 | 22 |
4 | 130 | 152 | 22 |
5 | 184 | 203 | 19 |
6 | 210 | 232 | 22 |
7 | 252 | 274 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7836.t1 MNARSDSDVPYNGDALIGVSVAIAVVQIVVVVARFYTRRLQQLALALDDYLILLALIASLGQSALYIILVKLAGV GHHMEYVEETPEKLVILEKGLYANEILDFPFTVTPAKISILVFYLRIFTTRSFKNMAYIVGAIVLGHGLGILFAA IFQCWPITYVWDTTIEGGSCFNQLAFYRYVSPPNILTDVLLLIMPLPYVWKLHTRKGQKLALTGVFLLGSLGAVA SILRMTIFFQENATTDPTWTSTNLGIWTILEGGIIIIAACLPPIWPLIMRILPQQLRSKGSSQTPQCYHRRYPTS QGNAKTPEGFSRLGDNSQSRRSHVPSLGSQTMVARESEYYSENISLEEAMHGYAVRPKEGQ* |
Coding | >Ani_SJS100_1|g7836.t1 ATGAATGCACGATCAGATTCCGATGTCCCATACAACGGTGATGCGCTGATAGGCGTGTCCGTTGCGATTGCCGTT GTCCAGATTGTGGTGGTTGTAGCACGTTTCTATACGAGACGCCTGCAACAGCTGGCTTTAGCTCTCGACGATTAC CTGATTCTTCTGGCATTGATCGCCAGCTTGGGCCAATCGGCTTTGTACATCATCTTGGTTAAGCTCGCAGGAGTC GGACATCACATGGAATATGTCGAAGAGACGCCTGAAAAGCTGGTGATCCTGGAGAAGGGCCTGTATGCCAACGAG ATTCTCGACTTCCCGTTCACAGTCACTCCAGCCAAAATCTCCATTCTGGTCTTTTACCTCCGAATCTTCACCACC CGATCGTTCAAAAACATGGCATATATAGTCGGTGCTATCGTGCTCGGACATGGCCTCGGCATCCTATTTGCAGCC ATCTTCCAGTGCTGGCCGATAACATACGTCTGGGATACAACCATTGAAGGAGGATCGTGCTTCAATCAACTGGCC TTCTACCGCTATGTGTCGCCGCCCAATATCTTGACAGACGTCCTCCTTCTGATCATGCCATTGCCATATGTCTGG AAATTACATACGCGAAAAGGACAGAAGTTGGCTTTAACGGGAGTATTCCTCCTCGGCAGTTTAGGAGCTGTAGCC AGTATCTTGCGAATGACGATTTTCTTTCAAGAAAATGCCACGACCGACCCAACCTGGACATCCACCAACCTAGGA ATCTGGACCATCCTAGAAGGCGGAATCATCATCATCGCCGCCTGTCTCCCACCCATTTGGCCCTTGATCATGCGC ATTCTACCTCAACAGCTGCGCAGCAAGGGCTCTTCTCAGACTCCGCAGTGCTATCATCGCCGCTACCCAACCAGC CAAGGCAATGCCAAGACTCCGGAGGGCTTCTCTCGACTCGGGGACAACAGTCAGTCGCGCAGATCGCATGTCCCA TCGCTGGGAAGTCAGACGATGGTGGCGCGGGAATCTGAGTACTATTCGGAAAATATCTCGCTGGAGGAGGCGATG CACGGGTATGCGGTGCGGCCGAAAGAGGGTCAGTAG |
Transcript | >Ani_SJS100_1|g7836.t1 ATGAATGCACGATCAGATTCCGATGTCCCATACAACGGTGATGCGCTGATAGGCGTGTCCGTTGCGATTGCCGTT GTCCAGATTGTGGTGGTTGTAGCACGTTTCTATACGAGACGCCTGCAACAGCTGGCTTTAGCTCTCGACGATTAC CTGATTCTTCTGGCATTGATCGCCAGCTTGGGCCAATCGGCTTTGTACATCATCTTGGTTAAGCTCGCAGGAGTC GGACATCACATGGAATATGTCGAAGAGACGCCTGAAAAGCTGGTGATCCTGGAGAAGGGCCTGTATGCCAACGAG ATTCTCGACTTCCCGTTCACAGTCACTCCAGCCAAAATCTCCATTCTGGTCTTTTACCTCCGAATCTTCACCACC CGATCGTTCAAAAACATGGCATATATAGTCGGTGCTATCGTGCTCGGACATGGCCTCGGCATCCTATTTGCAGCC ATCTTCCAGTGCTGGCCGATAACATACGTCTGGGATACAACCATTGAAGGAGGATCGTGCTTCAATCAACTGGCC TTCTACCGCTATGTGTCGCCGCCCAATATCTTGACAGACGTCCTCCTTCTGATCATGCCATTGCCATATGTCTGG AAATTACATACGCGAAAAGGACAGAAGTTGGCTTTAACGGGAGTATTCCTCCTCGGCAGTTTAGGAGCTGTAGCC AGTATCTTGCGAATGACGATTTTCTTTCAAGAAAATGCCACGACCGACCCAACCTGGACATCCACCAACCTAGGA ATCTGGACCATCCTAGAAGGCGGAATCATCATCATCGCCGCCTGTCTCCCACCCATTTGGCCCTTGATCATGCGC ATTCTACCTCAACAGCTGCGCAGCAAGGGCTCTTCTCAGACTCCGCAGTGCTATCATCGCCGCTACCCAACCAGC CAAGGCAATGCCAAGACTCCGGAGGGCTTCTCTCGACTCGGGGACAACAGTCAGTCGCGCAGATCGCATGTCCCA TCGCTGGGAAGTCAGACGATGGTGGCGCGGGAATCTGAGTACTATTCGGAAAATATCTCGCTGGAGGAGGCGATG CACGGGTATGCGGTGCGGCCGAAAGAGGGTCAGTAG |
Gene | >Ani_SJS100_1|g7836.t1 ATGAATGCACGATCAGATTCCGATGTCCCATACAACGGTGATGCGCTGATAGGCGTGTCCGTTGCGATTGCCGTT GTCCAGATTGTGGTGGTTGTAGCACGTTTCTATACGAGACGCCTGCAACAGCTGGCTTTAGCTCTCGACGATTAC CTGATTCTTCTGGCATTGGTACTTACTTGCCTGTCCTTCTGGTTCTTGTTCCGTGCTTACATTGTTTACAGATCG CCAGCTTGGGCCAATCGGCTTTGTACATCATCTGTAAGTGGGATATTTCAACAACAGCCCGATCAAGCACTGACC GTTGGGTTTCCTTTCGCAAAGTGGTTAAGCTCGCAGGAGTCGGACATCACATGGAATATGTCGAAGAGACGCCTG AAAAGCTGGTGATCCTGGAGAAGGTATAACTCCCTGGTTTGATTGTTAATGCCGACATGCCTAACATGATTCAGG GCCTGTATGCCAACGAGATTCTCGACTTCCCGTTCACAGTCACTCCAGCCAAAATCTCCATTCTGGTCTTTTACC TCCGAATCTTCACCACCCGATCGTTCAAAAACATGGCATATATAGTCGGTGCTATCGTGCTCGGACATGGCCTCG GCATCCTATTTGCAGCCATCTTCCAGTGCTGGCCGATAACATACGTCTGGGATACAACCATTGAAGGAGGATCGT GCTTCAATCAACTGGCCTTCTACCGCTATGTGTCGCCGCCCAATATCTTGACAGACGTCCTCCTTCTGATCATGC CATTGCCATATGTCTGGAAATTACATACGCGAAAAGGACAGAAGTTGGCTTTAACGGGAGTATTCCTCCTCGGCA GTTTGTAAGTATATACTACCACCACCCCAGCCACGCACTGAACCAGAATCGACTAAACTTACACACTCCGTCCTT ACCAGAGGAGCTGTAGCCAGTATCTTGCGAATGACGATTTTCTTTCAAGAAAATGCCACGACCGACCCAACCTGT ACGTCCTTTCTCTCCACATACCTCAACGAACTCCCACCCGGGCTAACCACATCAACTCAGGGACATCCACCAACC TAGGAATCTGGACCATCCTAGAAGGCGGAATCATCATCATCGCCGCCTGTCTCCCACCCATTTGGCCCTTGATCA TGCGCATTCTACCTCAACAGCTGCGCAGCAAGGGCTCTTCTCAGACTCCGCAGTGCTATCATCGCCGCTACCCAA CCAGCCAAGGCAATGCCAAGACTCCGGAGGGCTTCTCTCGACTCGGGGACAACAGTCAGTCGCGCAGATCGCATG TCCCATCGCTGGGAAGTCAGACGATGGTGGCGCGGGAATCTGAGTACTATTCGGAAAATATCTCGCTGGAGGAGG CGATGCACGGGTATGCGGTGCGGCCGAAAGAGGGTCAGTAG |