© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g7824.t1 |
| Gene name | |
| Location | scaffold_057:101774..102563 |
| Strand | - |
| Gene length (bp) | 789 |
| Transcript length (bp) | 789 |
| Coding sequence length (bp) | 789 |
| Protein length (aa) | 263 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07743 | HSCB_C | HSCB C-terminal oligomerisation domain | 8.2E-20 | 170 | 248 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051259 | protein complex oligomerization | Yes |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0008150 | biological_process | No |
| GO:0022607 | cellular component assembly | No |
| GO:0009987 | cellular process | No |
| GO:0065003 | protein-containing complex assembly | No |
| GO:0016043 | cellular component organization | No |
| GO:0043933 | protein-containing complex organization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7824.t1 MLRNSRLASRFARTGVLQARASPRTSSLQQQHPSSLLSSPSSPPPTTTINTFRLASTTTTTPPNDTQTTPDITNH YTIFKQTLPAGPPPSSPFSIPTADLRREFLRWQSLIHPDKYPQGPQKQQAEALSARINEAYRTLLDPLQRAQYLL REMHGIDVTAEDGASKHALDAETLMEVMEVQETIEEVTDSGEDAAAAEEKINELKVENQGRVEECVRVLGEAFDK GDIELARRECVRLRFWYSVGEGLREWEPGNREIRLVH* |
| Coding | >Ani_SJS100_1|g7824.t1 ATGCTACGAAACAGCCGTCTTGCATCGCGGTTTGCCCGCACAGGCGTCCTTCAAGCTCGCGCATCCCCCCGCACA TCCTCCCTACAGCAGCAGCATCCTTCATCTCTACTATCATCGCCATCATCACCACCACCAACAACAACAATCAAT ACCTTCCGCCTCGCCTCCACAACTACTACAACACCTCCCAACGACACCCAAACAACCCCAGACATAACAAACCAC TACACGATCTTCAAACAAACTCTGCCCGCAGGCCCACCCCCGTCCTCACCCTTCAGCATCCCAACGGCCGACCTC CGCCGCGAGTTCCTCCGCTGGCAATCCCTCATCCACCCGGACAAATACCCGCAGGGCCCACAGAAGCAGCAAGCG GAGGCATTATCCGCGCGCATCAACGAGGCATACCGCACTCTGCTGGACCCGCTGCAGCGGGCGCAGTATCTCCTG CGTGAGATGCACGGGATAGATGTCACGGCGGAGGACGGGGCGTCGAAGCATGCGTTGGATGCGGAGACGTTGATG GAGGTGATGGAGGTGCAGGAGACGATTGAGGAGGTGACGGATTCTGGGGAGGATGCTGCGGCTGCGGAGGAGAAA ATTAATGAGTTGAAGGTGGAGAATCAGGGGAGGGTGGAGGAGTGTGTGAGGGTTCTTGGGGAGGCGTTTGATAAA GGAGATATTGAGTTGGCGAGGAGGGAGTGTGTCAGGTTGAGGTTTTGGTATAGTGTTGGGGAGGGGTTGAGGGAG TGGGAGCCGGGGAATAGGGAGATTAGGTTGGTTCATTGA |
| Transcript | >Ani_SJS100_1|g7824.t1 ATGCTACGAAACAGCCGTCTTGCATCGCGGTTTGCCCGCACAGGCGTCCTTCAAGCTCGCGCATCCCCCCGCACA TCCTCCCTACAGCAGCAGCATCCTTCATCTCTACTATCATCGCCATCATCACCACCACCAACAACAACAATCAAT ACCTTCCGCCTCGCCTCCACAACTACTACAACACCTCCCAACGACACCCAAACAACCCCAGACATAACAAACCAC TACACGATCTTCAAACAAACTCTGCCCGCAGGCCCACCCCCGTCCTCACCCTTCAGCATCCCAACGGCCGACCTC CGCCGCGAGTTCCTCCGCTGGCAATCCCTCATCCACCCGGACAAATACCCGCAGGGCCCACAGAAGCAGCAAGCG GAGGCATTATCCGCGCGCATCAACGAGGCATACCGCACTCTGCTGGACCCGCTGCAGCGGGCGCAGTATCTCCTG CGTGAGATGCACGGGATAGATGTCACGGCGGAGGACGGGGCGTCGAAGCATGCGTTGGATGCGGAGACGTTGATG GAGGTGATGGAGGTGCAGGAGACGATTGAGGAGGTGACGGATTCTGGGGAGGATGCTGCGGCTGCGGAGGAGAAA ATTAATGAGTTGAAGGTGGAGAATCAGGGGAGGGTGGAGGAGTGTGTGAGGGTTCTTGGGGAGGCGTTTGATAAA GGAGATATTGAGTTGGCGAGGAGGGAGTGTGTCAGGTTGAGGTTTTGGTATAGTGTTGGGGAGGGGTTGAGGGAG TGGGAGCCGGGGAATAGGGAGATTAGGTTGGTTCATTGA |
| Gene | >Ani_SJS100_1|g7824.t1 ATGCTACGAAACAGCCGTCTTGCATCGCGGTTTGCCCGCACAGGCGTCCTTCAAGCTCGCGCATCCCCCCGCACA TCCTCCCTACAGCAGCAGCATCCTTCATCTCTACTATCATCGCCATCATCACCACCACCAACAACAACAATCAAT ACCTTCCGCCTCGCCTCCACAACTACTACAACACCTCCCAACGACACCCAAACAACCCCAGACATAACAAACCAC TACACGATCTTCAAACAAACTCTGCCCGCAGGCCCACCCCCGTCCTCACCCTTCAGCATCCCAACGGCCGACCTC CGCCGCGAGTTCCTCCGCTGGCAATCCCTCATCCACCCGGACAAATACCCGCAGGGCCCACAGAAGCAGCAAGCG GAGGCATTATCCGCGCGCATCAACGAGGCATACCGCACTCTGCTGGACCCGCTGCAGCGGGCGCAGTATCTCCTG CGTGAGATGCACGGGATAGATGTCACGGCGGAGGACGGGGCGTCGAAGCATGCGTTGGATGCGGAGACGTTGATG GAGGTGATGGAGGTGCAGGAGACGATTGAGGAGGTGACGGATTCTGGGGAGGATGCTGCGGCTGCGGAGGAGAAA ATTAATGAGTTGAAGGTGGAGAATCAGGGGAGGGTGGAGGAGTGTGTGAGGGTTCTTGGGGAGGCGTTTGATAAA GGAGATATTGAGTTGGCGAGGAGGGAGTGTGTCAGGTTGAGGTTTTGGTATAGTGTTGGGGAGGGGTTGAGGGAG TGGGAGCCGGGGAATAGGGAGATTAGGTTGGTTCATTGA |