Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7793.t1
Gene name
Locationscaffold_057:5620..6445
Strand-
Gene length (bp)825
Transcript length (bp)708
Coding sequence length (bp)708
Protein length (aa) 236

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7793.t1
MRLQLTTSLALLATASTVVADDVVSVLWPSSASGENYNAKLIGTTGGDLTTLVINCPATASGSVTSAPAATAATT
SAAVVKRATTASSSDDDDDNFNDSCNVPDSGETLTVGSSTWAFTTSGTAFSEEAACAFTGTTVASCAFTFNIDTQ
TSSSSGVTTTQLNKVPITITSTVSASATGSATGSGSTASATGDASGSSASSTGAATTTSDSGAFATGASQWVAGG
AAMMVALAMA*
Coding >Ani_SJS100_1|g7793.t1
ATGCGTCTTCAATTGACCACCTCTCTGGCCCTCCTGGCCACTGCCTCCACCGTCGTCGCTGACGATGTTGTCTCG
GTCCTCTGGCCCTCCTCCGCCAGCGGTGAGAACTACAACGCCAAGCTGATTGGAACCACTGGCGGCGACCTCACC
ACTCTGGTCATCAACTGCCCCGCCACGGCCAGCGGCTCCGTGACCAGCGCTCCCGCTGCCACCGCCGCAACCACC
AGCGCCGCCGTCGTCAAGCGTGCTACCACCGCCTCCAGCTCGGACGATGACGATGATAACTTCAACGATAGCTGC
AATGTCCCCGACAGCGGCGAGACCCTGACTGTCGGCAGCAGCACCTGGGCCTTTACTACCTCCGGTACCGCCTTC
TCCGAAGAGGCCGCCTGCGCCTTCACCGGCACCACTGTCGCCTCCTGCGCTTTCACCTTCAACATTGACACTCAG
ACTTCCTCCTCCAGCGGTGTTACCACCACTCAGCTCAACAAGGTCCCCATCACCATCACCTCCACTGTCTCCGCC
TCTGCCACTGGCTCTGCCACCGGTAGTGGCTCCACCGCCTCTGCTACGGGCGATGCCTCTGGCTCTTCTGCCTCC
TCTACTGGCGCTGCTACTACCACCAGTGACAGTGGTGCGTTCGCTACTGGTGCTAGCCAGTGGGTTGCCGGTGGT
GCTGCCATGATGGTTGCTTTGGCTATGGCTTAA
Transcript >Ani_SJS100_1|g7793.t1
ATGCGTCTTCAATTGACCACCTCTCTGGCCCTCCTGGCCACTGCCTCCACCGTCGTCGCTGACGATGTTGTCTCG
GTCCTCTGGCCCTCCTCCGCCAGCGGTGAGAACTACAACGCCAAGCTGATTGGAACCACTGGCGGCGACCTCACC
ACTCTGGTCATCAACTGCCCCGCCACGGCCAGCGGCTCCGTGACCAGCGCTCCCGCTGCCACCGCCGCAACCACC
AGCGCCGCCGTCGTCAAGCGTGCTACCACCGCCTCCAGCTCGGACGATGACGATGATAACTTCAACGATAGCTGC
AATGTCCCCGACAGCGGCGAGACCCTGACTGTCGGCAGCAGCACCTGGGCCTTTACTACCTCCGGTACCGCCTTC
TCCGAAGAGGCCGCCTGCGCCTTCACCGGCACCACTGTCGCCTCCTGCGCTTTCACCTTCAACATTGACACTCAG
ACTTCCTCCTCCAGCGGTGTTACCACCACTCAGCTCAACAAGGTCCCCATCACCATCACCTCCACTGTCTCCGCC
TCTGCCACTGGCTCTGCCACCGGTAGTGGCTCCACCGCCTCTGCTACGGGCGATGCCTCTGGCTCTTCTGCCTCC
TCTACTGGCGCTGCTACTACCACCAGTGACAGTGGTGCGTTCGCTACTGGTGCTAGCCAGTGGGTTGCCGGTGGT
GCTGCCATGATGGTTGCTTTGGCTATGGCTTAA
Gene >Ani_SJS100_1|g7793.t1
ATGCGTCTTCAATTGACCACCTCTCTGGCCCTCCTGGCCACTGCCTCCACCGTCGTCGCTGACGATGTTGTCTCG
GTCCTCTGGCCCTCCTCCGCCAGCGGTGAGAACTACAACGCCAAGCTGATTGGAACCGTACGTCCTCTTCTCCGT
ACTATACTTCCCCAGATCTAACTCCTATCTAGACTGGCGGCGACCTCACCACTCTGGTCATCAACTGCCCCGCCA
CGGCCAGCGGCTCCGTGACCAGCGCTCCCGCTGCCACCGCCGCAACCACCAGCGCCGCCGTCGTCAAGCGTGCTA
CCACCGCCTCCAGCTCGGACGATGACGATGATAACTTCAACGATAGCTGCAATGTCCCCGACAGCGGCGAGACCC
TGACTGTCGGCAGCAGCACCTGGGCCTTTACTACCTCCGGTACCGCCTTGTAAGCTAACCCACATGCCTGACCCC
AAACCCGTAAACCATATGTATACTTACGCTTAAAACAACAGCTCCGAAGAGGCCGCCTGCGCCTTCACCGGCACC
ACTGTCGCCTCCTGCGCTTTCACCTTCAACATTGACACTCAGACTTCCTCCTCCAGCGGTGTTACCACCACTCAG
CTCAACAAGGTCCCCATCACCATCACCTCCACTGTCTCCGCCTCTGCCACTGGCTCTGCCACCGGTAGTGGCTCC
ACCGCCTCTGCTACGGGCGATGCCTCTGGCTCTTCTGCCTCCTCTACTGGCGCTGCTACTACCACCAGTGACAGT
GGTGCGTTCGCTACTGGTGCTAGCCAGTGGGTTGCCGGTGGTGCTGCCATGATGGTTGCTTTGGCTATGGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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