Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7739.t1
Gene name
Locationscaffold_056:71261..72289
Strand-
Gene length (bp)1028
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 3.9E-11 246 288
PF17123 zf-RING_11 RING-like zinc finger 2.7E-09 248 275
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 9.6E-08 248 288
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.2E-07 248 287

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7739.t1
MSSTTTGSSSSATSTDRNGNNNSSSPTSSPLLFFVALGFGVVFTNLWIIVGVKYCFRYNQRNRQLRSEVTGEPID
LVAMPRTHRRRREKKLMTMDDVNERFPLTKYKAWRSSRENEGLSGAGGISAPNSRSQSPKDENYMLSASLGAPSS
MVASPLKSHQRVDSNTSQASAPLENLETTLPQSEEKSQRYSEPSPTNIGVNDNANISAPEQPRNHALNHVIVEDV
GDLEDHIRTAVPADFLANPGDTCAICLDTIEDEDDIRGLTCGHAFHASCVDPWLTSRRACCPLSQNVKVDGAWHE
*
Coding >Ani_SJS100_1|g7739.t1
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGC
CCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGATTATCGTG
GGGGTAAAATATTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGAT
CTGGTCGCTATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGG
TTTCCACTGACGAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCG
GCACCGAATAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCC
ATGGTGGCATCGCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAAC
CTGGAGACAACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTA
AACGACAACGCCAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTT
GGAGACCTGGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATA
TGTCTCGATACGATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTT
GACCCATGGTTGACAAGTCGACGGGCTTGCTGTCCCCTATCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAG
TGA
Transcript >Ani_SJS100_1|g7739.t1
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGC
CCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGATTATCGTG
GGGGTAAAATATTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGAT
CTGGTCGCTATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGG
TTTCCACTGACGAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCG
GCACCGAATAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCC
ATGGTGGCATCGCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAAC
CTGGAGACAACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTA
AACGACAACGCCAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTT
GGAGACCTGGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATA
TGTCTCGATACGATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTT
GACCCATGGTTGACAAGTCGACGGGCTTGCTGTCCCCTATCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAG
TGA
Gene >Ani_SJS100_1|g7739.t1
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGC
CCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGTATGTCCAA
ATTGGTATCACTAGGCCTTTGCTGCGCTTAGATGCTCATCTAACCATCGCGTTCCAGGATTATCGTGGGGGTAAA
ATATTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGATCTGGTCGC
TATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGGTTTCCACT
GACGAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCGGCACCGAA
TAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCCATGGTGGC
ATCGCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAACCTGGAGAC
AACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTAAACGACAA
CGCCAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTTGGAGACCT
GGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATATGTCTCGA
TACGATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTTGACCCATG
GTTGACAAGTCGACGGGCTTGCTGTCCCCTATGTAAGGCAGATTACTACATCCCGAAACCTCGCGCAGAAACTTC
TGAATTGGCTCCTAGCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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