© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7718.t1 |
| Gene name | |
| Location | scaffold_055:212507..216044 |
| Strand | + |
| Gene length (bp) | 3537 |
| Transcript length (bp) | 2121 |
| Coding sequence length (bp) | 2121 |
| Protein length (aa) | 707 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00176 | SNF2-rel_dom | SNF2-related domain | 4.8E-53 | 104 | 439 |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | 1.7E-15 | 534 | 648 |
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 2.2E-05 | 453 | 495 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0046872 | metal ion binding | Yes |
| GO:0140658 | ATP-dependent chromatin remodeler activity | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043167 | ion binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0008094 | ATP-dependent activity, acting on DNA | No |
| GO:0003674 | molecular_function | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0043169 | cation binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0140097 | catalytic activity, acting on DNA | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7718.t1 MERKSSNTRRGITPLADTSIGNTRNARGGAATRGIPRRAGRNSRSEPAETERRGYRALRERQKLERQHPCVITMW DDLQNTPPIKPVRAEQPQGISRTLKSFQLEGLSWMIQQEKSHYKGGLLGDEMGMGKTIQAVSLLMSDYPIGRPSL VVVPPVALMQWQSEIKAYTNGQLNVLIYHNSNSKVKTLTKEDLLAYDVIMISYSGLESIHRKELKGWNRNVGLIQ ENSVIHSIHYHRLILDEAHSIKQRTTSVARACFALKANYKWCLSGTPVQNRIGEFFSLLRFLDVRPFACYFCKQC QCQQLHWSQDAAKKCTECGHSGFSHVSIFNQEILNPITERDNPDARKEALSKLRLITDRIMLRRVKRDHTSSMEL PPKRVILHNEFFGEIERDFSQSIMTNTTRQFDTYVSRGVMLNNYANIFGLIMQMRQVANHPDLILKKHAETGQNV LVCCICDEPAEEAIRSRCHHEFCRKCAKDYVRSFDVGSIVDCPRCHIPLSIDFEQPDIEQEEECIKQNSIINRIR MEDWTSSTKIEMLVYELYKLRSKKQTLKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQNSIEYFMNN VDVEVFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQRRPCVITRLCIEDSVESRIVLLQEKK ANLINGTINKDQGEALEKLTPEDMQFLFRGS* |
| Coding | >Ani_SJS100_1|g7718.t1 ATGGAGAGGAAATCATCAAATACGAGGAGGGGAATCACTCCACTAGCCGATACCTCGATTGGAAATACGCGGAAT GCTAGAGGCGGAGCCGCCACACGAGGGATTCCACGCAGAGCGGGCAGAAATTCTCGCTCAGAGCCAGCAGAGACG GAAAGGAGGGGGTACCGTGCTCTTAGAGAAAGACAAAAACTCGAAAGGCAGCACCCATGCGTCATCACAATGTGG GATGATTTGCAAAACACTCCTCCGATAAAGCCGGTAAGGGCAGAGCAGCCTCAGGGTATATCGAGAACACTCAAG TCATTCCAGCTTGAAGGCCTGAGTTGGATGATTCAACAAGAAAAATCACATTACAAAGGAGGATTGCTGGGAGAC GAGATGGGCATGGGCAAAACAATCCAGGCCGTGTCCCTTCTTATGTCTGATTACCCCATTGGTAGGCCATCGCTT GTCGTTGTTCCTCCAGTTGCTTTAATGCAATGGCAATCAGAGATCAAAGCATATACGAACGGCCAATTGAATGTG CTCATCTACCACAATTCGAATTCGAAGGTCAAAACTCTCACAAAGGAGGATCTTCTGGCTTATGATGTGATAATG ATTTCTTATTCTGGTCTCGAATCAATTCACCGCAAAGAGCTGAAAGGGTGGAATCGCAATGTTGGACTCATCCAG GAGAACAGCGTCATTCATTCTATTCATTATCACCGCTTGATCCTGGATGAAGCGCATAGCATCAAGCAACGTACA ACTAGTGTCGCCCGTGCATGCTTTGCACTGAAAGCAAACTACAAATGGTGTCTGTCGGGTACCCCTGTCCAGAAT CGGATTGGGGAGTTCTTTTCTCTCCTTCGCTTTCTGGATGTCCGACCATTTGCCTGCTACTTTTGCAAGCAGTGC CAGTGCCAGCAGCTCCACTGGTCACAGGATGCAGCAAAAAAATGCACTGAGTGCGGGCATAGTGGGTTCAGCCAT GTTTCAATATTCAACCAGGAAATCTTGAATCCTATCACTGAAAGGGATAATCCGGACGCCCGCAAGGAAGCATTG TCGAAGCTACGCCTTATAACTGATAGGATCATGCTACGGCGAGTAAAACGAGATCACACGTCTTCGATGGAGCTT CCACCAAAGCGTGTTATTCTCCATAACGAATTCTTTGGAGAGATTGAACGTGATTTCTCCCAGAGCATTATGACC AACACGACGAGGCAGTTTGATACGTATGTAAGCCGTGGTGTCATGTTGAACAACTACGCAAACATCTTCGGCCTT ATCATGCAGATGCGCCAGGTTGCGAATCACCCAGATCTCATTCTGAAAAAACACGCAGAAACCGGGCAAAACGTA CTTGTATGCTGCATTTGCGACGAACCGGCGGAAGAAGCAATTCGTTCCCGTTGTCATCATGAGTTTTGCCGAAAA TGCGCCAAAGACTATGTTAGGTCGTTCGATGTGGGCTCAATCGTCGATTGCCCTCGGTGCCACATCCCTTTGTCA ATCGATTTCGAACAACCTGACATTGAGCAAGAGGAAGAGTGCATCAAGCAGAATTCCATCATCAACCGGATCCGC ATGGAGGACTGGACATCGTCAACCAAAATTGAGATGCTTGTTTACGAGCTCTATAAATTGAGAAGCAAGAAGCAG ACACTGAAGTCAATTGTCTTCTCCCAGTTCACCTCGATGCTACAACTTGTGGAATGGCGTCTACGTCGAGCTGGT TTCAACACCGTCATGCTCGATGGCACTATGACGCCAGCACAACGCCAAAATTCTATTGAATACTTTATGAACAAT GTCGATGTCGAAGTGTTTCTGGTTTCCCTCAAGGCCGGCGGTGTGGCTTTGAACCTAACCGAGGCCTCGAGAGTT TTTATCGTTGACCCGTGGTGGAACCCAGCTGCTGAATGGCAGAGTGCAGACCGGTGCCATCGCATCGGCCAGCGC CGACCTTGTGTCATAACTCGCTTGTGCATTGAAGATTCGGTAGAATCTCGAATTGTTCTGCTACAAGAAAAGAAG GCCAACCTGATCAACGGTACCATCAACAAAGATCAAGGAGAAGCTTTAGAGAAGCTTACCCCGGAAGACATGCAA TTCTTGTTCAGAGGATCTTAG |
| Transcript | >Ani_SJS100_1|g7718.t1 ATGGAGAGGAAATCATCAAATACGAGGAGGGGAATCACTCCACTAGCCGATACCTCGATTGGAAATACGCGGAAT GCTAGAGGCGGAGCCGCCACACGAGGGATTCCACGCAGAGCGGGCAGAAATTCTCGCTCAGAGCCAGCAGAGACG GAAAGGAGGGGGTACCGTGCTCTTAGAGAAAGACAAAAACTCGAAAGGCAGCACCCATGCGTCATCACAATGTGG GATGATTTGCAAAACACTCCTCCGATAAAGCCGGTAAGGGCAGAGCAGCCTCAGGGTATATCGAGAACACTCAAG TCATTCCAGCTTGAAGGCCTGAGTTGGATGATTCAACAAGAAAAATCACATTACAAAGGAGGATTGCTGGGAGAC GAGATGGGCATGGGCAAAACAATCCAGGCCGTGTCCCTTCTTATGTCTGATTACCCCATTGGTAGGCCATCGCTT GTCGTTGTTCCTCCAGTTGCTTTAATGCAATGGCAATCAGAGATCAAAGCATATACGAACGGCCAATTGAATGTG CTCATCTACCACAATTCGAATTCGAAGGTCAAAACTCTCACAAAGGAGGATCTTCTGGCTTATGATGTGATAATG ATTTCTTATTCTGGTCTCGAATCAATTCACCGCAAAGAGCTGAAAGGGTGGAATCGCAATGTTGGACTCATCCAG GAGAACAGCGTCATTCATTCTATTCATTATCACCGCTTGATCCTGGATGAAGCGCATAGCATCAAGCAACGTACA ACTAGTGTCGCCCGTGCATGCTTTGCACTGAAAGCAAACTACAAATGGTGTCTGTCGGGTACCCCTGTCCAGAAT CGGATTGGGGAGTTCTTTTCTCTCCTTCGCTTTCTGGATGTCCGACCATTTGCCTGCTACTTTTGCAAGCAGTGC CAGTGCCAGCAGCTCCACTGGTCACAGGATGCAGCAAAAAAATGCACTGAGTGCGGGCATAGTGGGTTCAGCCAT GTTTCAATATTCAACCAGGAAATCTTGAATCCTATCACTGAAAGGGATAATCCGGACGCCCGCAAGGAAGCATTG TCGAAGCTACGCCTTATAACTGATAGGATCATGCTACGGCGAGTAAAACGAGATCACACGTCTTCGATGGAGCTT CCACCAAAGCGTGTTATTCTCCATAACGAATTCTTTGGAGAGATTGAACGTGATTTCTCCCAGAGCATTATGACC AACACGACGAGGCAGTTTGATACGTATGTAAGCCGTGGTGTCATGTTGAACAACTACGCAAACATCTTCGGCCTT ATCATGCAGATGCGCCAGGTTGCGAATCACCCAGATCTCATTCTGAAAAAACACGCAGAAACCGGGCAAAACGTA CTTGTATGCTGCATTTGCGACGAACCGGCGGAAGAAGCAATTCGTTCCCGTTGTCATCATGAGTTTTGCCGAAAA TGCGCCAAAGACTATGTTAGGTCGTTCGATGTGGGCTCAATCGTCGATTGCCCTCGGTGCCACATCCCTTTGTCA ATCGATTTCGAACAACCTGACATTGAGCAAGAGGAAGAGTGCATCAAGCAGAATTCCATCATCAACCGGATCCGC ATGGAGGACTGGACATCGTCAACCAAAATTGAGATGCTTGTTTACGAGCTCTATAAATTGAGAAGCAAGAAGCAG ACACTGAAGTCAATTGTCTTCTCCCAGTTCACCTCGATGCTACAACTTGTGGAATGGCGTCTACGTCGAGCTGGT TTCAACACCGTCATGCTCGATGGCACTATGACGCCAGCACAACGCCAAAATTCTATTGAATACTTTATGAACAAT GTCGATGTCGAAGTGTTTCTGGTTTCCCTCAAGGCCGGCGGTGTGGCTTTGAACCTAACCGAGGCCTCGAGAGTT TTTATCGTTGACCCGTGGTGGAACCCAGCTGCTGAATGGCAGAGTGCAGACCGGTGCCATCGCATCGGCCAGCGC CGACCTTGTGTCATAACTCGCTTGTGCATTGAAGATTCGGTAGAATCTCGAATTGTTCTGCTACAAGAAAAGAAG GCCAACCTGATCAACGGTACCATCAACAAAGATCAAGGAGAAGCTTTAGAGAAGCTTACCCCGGAAGACATGCAA TTCTTGTTCAGAGGATCTTAG |
| Gene | >Ani_SJS100_1|g7718.t1 ATGGAGAGGAAATCATCAAATACGAGGAGGGGAATCACTCCACTAGCCGGTGAGGTCTCTTTGTCGTCTCCCAAA GGCACAACGACGCTAAAAAGAAATATTTACATTCCCCAAATGAGAATATCACAAATCAATCGGAATTTTCATTAG CAATGACTGATATTTTGAGCACTACCAGATACCTCGTCCGTACCTAGACGAACCTCTGCGAGACTCGCTAGAGCA TCCTCAGCAGCTTATGCTGGGACCCCGAACATTTCAGAAAATGCAGGTGATGCCATAGGCCGGAAGCCTACGGTG GAAGAAGGGATGTCTTATAGGAATAGACCATACTCTATCGAAGTTGCAATACCTTTGAGGAGACCTCCGGTGTCA TCTTCCTCTGTTTCTCCTCTTCCAACCGAAGATGTATCTGGCGATGAGGATATAACACCTGCATACAGTACTCCA GCAACCAGTATAGCCGTCACACCTGTGGAATCAGATACAAATCGACCGAGAAAGAGGGTTAGCGCCTCTACACGT GCCCAGGAATTACGATCGAGTGCTATGTCTTTACATGCACCACGAGGATCAAAGAGGTCACCAGCAGCACTATCC ATAAGCCATCCCACATTGCAAGATTCTGATGCAGTATTGGCCCAGCATCTTCAAGCTCAAGAATATCAAGAACCA CCTTTTAAGTTACGAAGGACTTCGAGACGGCTTCAATCCAGAATGAAAGACTCGGCTGAAGAAGATAGTGTCATC GGGCTCGATTCTGACCACGATGCATATGAGGATCTATTTAAAGGACCGATTTCTTCGCACGGGGTAAGAAGGTCT CTTCGATCAGCTAACAAGAGTAGTCTTCGCCAGATATCCCCTATTGATATGGACGATAGCGGATCAGACGACGAT CAGCTAACTGACATTGAATCGGTCTCTTCTGTATCTTCCTCAAATGAGGATGAACTTCTAATCCCACGAAGGCGC TCCAGGATTGGAAATACGCGGAATGCTAGAGGCGGAGCCGCCACACGAGGGATTCCACGCAGAGCGGGCAGAAAT TCTCGCTCAGAGCCAGCAGAGACGGAAAGGAGGGGGTACCGTGTATGTTTCTCATCTTGGGCTATCTTGCGCTAT GTCTGACGAAGCATGCAGGCTCTTAGAGAAAGACAAAAACTCGAAAGGCAGCACCCATGCGTCATCACAATGTGG GATGATTTGCAAAACACTCCTCCGATAAAGCCGGTAAGGGCAGAGCAGCCTCAGGGTATATCGAGAACACTCAAG TCATTCCAGCTTGAAGGCCTGAGTTGGATGATTCAACAAGAAAAATCACATTACAAAGGAGGATTGCTGGGAGAC GAGATGGGCATGGGCAAAACAATCCAGGCCGTGTCCCTTCTTATGTCTGATTACCCCATTGGTAGGCCATCGCTT GTCGTTGTTCCTCCAGTTGCTTTAATGCAATGGCAATCAGAGATCAAAGTATGCCCGTTAAAATCCTAAAGTCGT AGTATCGCTAATGCATTGGACTAGGCATATACGAACGGCCAATTGAATGTGCTCATCTACCACAATTCGAATTCG AAGGTCAAAACTCTCACAAAGGAGGATCTTCTGGCTTATGATGTGATAATGATTTCTTGTACGGTGGCCCTAAGG AAATGAGTCACGGGCCCTAAGAACTGACATGACATAAATTTCAGATTCTGGTCTCGAATCAATTCACCGCAAAGA GCTGAAAGGGTGGAATCGCAATGTTGGACTCATCCAGGAGAACAGTAAGAGGTCATGTTGTTGACCTAGAAGACG GTCTATGCTAACCAGGAAAGGCGTCATTCATTCTATTCATTATCACCGCTTGATCCTGGATGAAGCGCATAGCAT CAAGGTATAGTTGGCCTCTCTTTTACGATGCCGTGTTATCAAGCATTGACAGCCGAGGTCTGTAGCAACGTACAA CTAGTGTCGCCCGTGCATGCTTTGCACTGAAAGCAAACTACAAATGGTGTCTGTCGGGTACCCCTGTCCAGAATC GGATTGGGGAGTTCTTTTCTCTCCTTCGCTTTCTGGATGTCCGACCATTTGCCTGCTACTTTTGCAAGCAGTGCC AGTGCCAGCAGCTCCACTGGTCACAGGATGCAGCAAAAAAATGCACTGAGTGCGGGCATAGGTACGGTCCTTCAT CACATACCATGGGCAAGTAGCTAATGTCTTCACTTATATAGTGGGTTCAGCCATGTTTCAATATTCAACCAGGAA ATCTTGAATCCTAGTAAGTTGTGTTTCAATGTACGCCGAGACCTCACTAACACTCCGGGAGTCACTGAAAGGGAT AATCCGGACGCCCGCAAGGAAGCATTGTCGAAGCTACGCCTTATAACTGATAGGATCATGCTACGGCGAGTAAAA CGAGATCACACGTCTTCGATGGAGCTTCCACCAAAGCGGTTCGTAACCTCTCCGCCTAGGTGTACTAAAAACAAT ATTAACGTTATTACAGTGTTATTCTCCATAACGAATTCTTTGGAGAGATTGAACGTGATTTCTCCCAGAGCATTA TGACCAACACGACGAGGCAGTTTGATACGTATGTAAGCCGTGGTGTCATGTTGAACAACTACGCAAACATCTTCG GCCTTATCATGCAGATGCGCCAGGTTGCGAATCACCCAGATCTCATTCTGAAAAAACACGCAGAAACCGGGCAAA ACGTACTTGTATGCTGCATTTGCGACGAACCGGCGGAAGAAGCAATTCGTTCCCGTTGTCATCATGAGTTTTGCC GAAAATGCGCCAAAGACTATGTTAGGTCGTTCGATGTGGGCTCAATCGTCGATTGCCCTCGGTGCCACATCCCTT TGTCAATCGATTTCGAACAACCTGACATTGAGCAAGAGGAAGAGTGCATCAAGCAGAATTCCATCATCAACCGGA TCCGCATGGAGGACTGGACATCGTCAACCAAAATTGAGATGCTTGTTTACGAGCTCTATAAATTGAGAAGCAAGA AGCAGACACTGAAGTCAATTGTCTTCTCCCAGTTCACCTCGATGCTACAACTTGTGGAATGGCGTCTACGTCGAG CTGGTTTCAACACCGTCATGCTCGATGGCACTATGACGCCAGCACAACGCCAAAATTCTATTGAATACTTTATGA ACAATGTCGATGTCGAAGTGTTTCTGGTTTCCCTCAAGGCCGGCGGTGTGGCTTTGAACCTAACCGAGGCCTCGA GAGTTTTTATCGTTGACCCGTAAGTGGCATTGACTAACAACGGAAACGAATGTCTCCCTCACTAACTCTACTGGT GCTAGGTGGTGGAACCCAGCTGCTGAATGGCAGAGTGCAGACCGGTGCCATCGCATCGGCCAGCGCCGACCTTGT GTCATAACTCGCTTGTGCATTGAAGATTCGGTAGAATCTCGAATTGTTCTGCTACAAGAAAAGAAGGCCAACCTG ATCAACGGTACCATCAACAAAGATCAAGGAGAAGCTTTAGAGAAGCTTACCCCGGAAGACATGCAATTCTTGTTC AGAGGATCTTAG |