Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g7689.t1
Gene name
Location	scaffold_055:128598..129693
Strand	+
Gene length (bp)	1095
Transcript length (bp)	966
Coding sequence length (bp)	966
Protein length (aa)	322

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04641	Rtf2	Rtf2 RING-finger	2.2E-71	1	298

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g7689.t1 MGNDGGSIPTRRELVREAARNPSTAQVKEAQREQQEHSWTTCPISHNQLMRPIVSDSVGNLYNKDAILRFLLPGD EADGISSKADCEEILCGRVKGLRDVVELKFEVDTEREAHPANGKQDKREGWICPVTAKQLGPNVKSVYLVPCGHV FSEEAIRQLKGDKCLQCDEPYTPDNVIPILPTKEADKQQLIERGHKLAEQGLTHSLKKAPGSKKRKKNAANGDAA DAGKEPKPTEKSTSATASRSNTSTPTPGGSSGIKNAATALLTARVLEEENEKKKRRKMLGTSDNISSLFTKETKD GHAKNTDFMTRGYSLPAAARK*
Coding	>Ani_SJS100_1\|g7689.t1 ATGGGTAATGATGGTGGCAGTATCCCAACCCGTCGCGAGCTCGTCCGCGAAGCGGCCCGCAACCCCAGCACAGCG CAAGTGAAAGAGGCGCAGCGCGAACAACAAGAACACTCGTGGACGACATGTCCGATATCGCACAACCAGTTGATG CGACCCATTGTCTCCGACAGCGTCGGGAATCTCTACAACAAAGACGCCATTCTCAGATTCCTTCTTCCCGGCGAC GAAGCCGACGGCATCAGCTCCAAGGCCGATTGCGAAGAGATCCTCTGTGGACGGGTCAAGGGACTCCGCGACGTC GTAGAGCTGAAGTTTGAAGTCGACACAGAGCGCGAAGCCCATCCCGCGAATGGAAAGCAGGACAAGCGTGAGGGG TGGATCTGTCCCGTCACGGCGAAGCAGTTGGGTCCGAATGTAAAGTCGGTTTATTTGGTGCCGTGCGGTCATGTT TTCTCGGAGGAGGCAATCCGCCAACTTAAGGGAGATAAGTGTTTGCAGTGCGACGAGCCATACACCCCCGACAAC GTGATTCCCATCCTTCCCACAAAAGAAGCCGACAAGCAGCAGCTCATTGAGCGTGGACATAAGCTTGCAGAACAA GGTCTTACACACTCTTTGAAAAAGGCCCCCGGCTCGAAGAAGCGCAAGAAGAACGCCGCGAATGGTGATGCGGCG GATGCGGGCAAGGAACCAAAGCCCACGGAGAAATCTACGAGTGCGACTGCCAGTCGGAGCAACACATCTACACCC ACACCGGGTGGCTCGAGTGGTATCAAGAATGCTGCTACTGCATTGCTGACGGCGCGGGTGCTGGAGGAGGAAAAC GAGAAGAAAAAGCGGCGGAAGATGCTGGGGACTAGTGACAATATCAGCAGTCTCTTCACAAAGGAGACTAAGGAT GGCCACGCCAAGAATACGGATTTCATGACGAGAGGATATAGTCTTCCTGCGGCGGCTAGGAAGTAG
Transcript	>Ani_SJS100_1\|g7689.t1 ATGGGTAATGATGGTGGCAGTATCCCAACCCGTCGCGAGCTCGTCCGCGAAGCGGCCCGCAACCCCAGCACAGCG CAAGTGAAAGAGGCGCAGCGCGAACAACAAGAACACTCGTGGACGACATGTCCGATATCGCACAACCAGTTGATG CGACCCATTGTCTCCGACAGCGTCGGGAATCTCTACAACAAAGACGCCATTCTCAGATTCCTTCTTCCCGGCGAC GAAGCCGACGGCATCAGCTCCAAGGCCGATTGCGAAGAGATCCTCTGTGGACGGGTCAAGGGACTCCGCGACGTC GTAGAGCTGAAGTTTGAAGTCGACACAGAGCGCGAAGCCCATCCCGCGAATGGAAAGCAGGACAAGCGTGAGGGG TGGATCTGTCCCGTCACGGCGAAGCAGTTGGGTCCGAATGTAAAGTCGGTTTATTTGGTGCCGTGCGGTCATGTT TTCTCGGAGGAGGCAATCCGCCAACTTAAGGGAGATAAGTGTTTGCAGTGCGACGAGCCATACACCCCCGACAAC GTGATTCCCATCCTTCCCACAAAAGAAGCCGACAAGCAGCAGCTCATTGAGCGTGGACATAAGCTTGCAGAACAA GGTCTTACACACTCTTTGAAAAAGGCCCCCGGCTCGAAGAAGCGCAAGAAGAACGCCGCGAATGGTGATGCGGCG GATGCGGGCAAGGAACCAAAGCCCACGGAGAAATCTACGAGTGCGACTGCCAGTCGGAGCAACACATCTACACCC ACACCGGGTGGCTCGAGTGGTATCAAGAATGCTGCTACTGCATTGCTGACGGCGCGGGTGCTGGAGGAGGAAAAC GAGAAGAAAAAGCGGCGGAAGATGCTGGGGACTAGTGACAATATCAGCAGTCTCTTCACAAAGGAGACTAAGGAT GGCCACGCCAAGAATACGGATTTCATGACGAGAGGATATAGTCTTCCTGCGGCGGCTAGGAAGTAG
Gene	>Ani_SJS100_1\|g7689.t1 ATGGGTAATGATGGTGGCAGGTATGTTCAACAAGCCTCTTACAATCTCCCCCACTCTATCAAAAAGCACAAACTA ACCACCCGCATCACCAGTATCCCAACCCGTCGCGAGCTCGTCCGCGAAGCGGCCCGCAACCCCAGCACAGCGCAA GTGAAAGAGGCGCAGCGCGAACAACAAGAACACTCGTGGACGACATGTCCGATATCGCACAACCAGTTGATGCGA CCCATTGTCTCCGACAGCGTCGGGAATCTCTACAACAAAGACGCCATTCTCAGATTCCTTCTTCCCGGCGACGAA GCCGACGGCATCAGCTCCAAGGCCGATTGCGAAGAGATCCTCTGTGGACGGGTCAAGGGACTCCGCGACGTCGTA GAGCTGAAGTTTGAAGTCGACACAGAGCGCGAAGCCCATCCCGCGAATGGAAAGCAGGACAAGCGTGAGGGGTGG ATCTGTCCCGTCACGGCGAAGCAGTTGGGTCCGAATGTAAAGTCGGTTTATTTGGTGCCGTGCGGTCATGTTTTC TCGGAGGAGGCAATCCGCCAACTTAAGGGAGATAAGTGTTTGCAGGTATGTTATCTCAGCCCATACGTTTTTGGT CTTCATGTTGGTGCTAATGAGGTCTAGTGCGACGAGCCATACACCCCCGACAACGTGATTCCCATCCTTCCCACA AAAGAAGCCGACAAGCAGCAGCTCATTGAGCGTGGACATAAGCTTGCAGAACAAGGTCTTACACACTCTTTGAAA AAGGCCCCCGGCTCGAAGAAGCGCAAGAAGAACGCCGCGAATGGTGATGCGGCGGATGCGGGCAAGGAACCAAAG CCCACGGAGAAATCTACGAGTGCGACTGCCAGTCGGAGCAACACATCTACACCCACACCGGGTGGCTCGAGTGGT ATCAAGAATGCTGCTACTGCATTGCTGACGGCGCGGGTGCTGGAGGAGGAAAACGAGAAGAAAAAGCGGCGGAAG ATGCTGGGGACTAGTGACAATATCAGCAGTCTCTTCACAAAGGAGACTAAGGATGGCCACGCCAAGAATACGGAT TTCATGACGAGAGGATATAGTCTTCCTGCGGCGGCTAGGAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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